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Protein
Submitted name:

Type III secretion outer membrane protein PscC

Gene

pscC

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

  • protein secretion by the type III secretion system Source: PseudoCAP
Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion outer membrane protein PscCImported
Gene namesi
Name:pscCImported
Ordered Locus Names:PA1716Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA1716.

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 600581Sequence analysisPRO_5004327041Add
BLAST

Proteomic databases

PaxDbiQ9I319.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA1716.

Structurei

3D structure databases

ProteinModelPortaliQ9I319.
SMRiQ9I319. Positions 30-165.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini178 – 27295Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000219614.
KOiK03219.
OMAiSITNAND.
OrthoDBiEOG6423BN.
PhylomeDBiQ9I319.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9I319-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRLLIGGLL ALLPGAVLRA QPLDWPSLPY DYVAQGESLR DVLANFGANY
60 70 80 90 100
DASVIVSDKV NDQVSGRFDL ESPQAFLQLM ASLYNLGWYY DGTVLYVFKT
110 120 130 140 150
TEMQSRLVRL EQVGEAELKR ALTAAGIWEA RFGWRADPSG RLVHVSGPGR
160 170 180 190 200
YLELVEQTAQ VLEQQYTLRS EKTGDLSVEI FPLRYAVAED RKIEYRDDEI
210 220 230 240 250
EAPGIASILS RVLSDANVVA VGDEPGKLRP GPQSSHAVVQ AEPSLNAVVV
260 270 280 290 300
RDHKDRLPMY RRLIEALDRP SARIEVGLSI IDINAENLAQ LGVDWSAGIR
310 320 330 340 350
LGNNKSIQIR TTGQDSEEGG GAGNGAVGSL VDSRGLDFLL AKVTLLQSQG
360 370 380 390 400
QAQIGSRPTL LTQENTQAVL DQSETYYVRV TGERVAELKA ITYGTMLKMT
410 420 430 440 450
PRVVTLGDTP EISLSLHIED GSQKPNSAGL DKIPTINRTV IDTIARVGHG
460 470 480 490 500
QSLLIGGIYR DELSQSQRKV PWLGDIPYLG ALFRTTADTV RRSVRLFLIE
510 520 530 540 550
PRLIDDGVGH YLALNNRRDL RGGLLEIDEL SNQSLSLRKL LGSARCQALA
560 570 580 590 600
PARAEQERLR QAGQGSFLTP CRMGAQEGWR VTDGACPKDG AWCVGAERGN
Length:600
Mass (Da):65,735
Last modified:March 1, 2001 - v1
Checksum:iBB3DEC64A93EDD8C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG05105.1.
PIRiD83430.
RefSeqiNP_250407.1. NC_002516.2.
WP_003100753.1. NZ_ASJY01000250.1.

Genome annotation databases

EnsemblBacteriaiAAG05105; AAG05105; PA1716.
GeneIDi881978.
KEGGipae:PA1716.
PATRICi19837787. VBIPseAer58763_1779.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG05105.1.
PIRiD83430.
RefSeqiNP_250407.1. NC_002516.2.
WP_003100753.1. NZ_ASJY01000250.1.

3D structure databases

ProteinModelPortaliQ9I319.
SMRiQ9I319. Positions 30-165.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA1716.

Proteomic databases

PaxDbiQ9I319.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG05105; AAG05105; PA1716.
GeneIDi881978.
KEGGipae:PA1716.
PATRICi19837787. VBIPseAer58763_1779.

Organism-specific databases

PseudoCAPiPA1716.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000219614.
KOiK03219.
OMAiSITNAND.
OrthoDBiEOG6423BN.
PhylomeDBiQ9I319.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228Imported.

Entry informationi

Entry nameiQ9I319_PSEAE
AccessioniPrimary (citable) accession number: Q9I319
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: March 16, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.