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Protein
Submitted name:

Probable transcriptional regulator

Gene

PA2005

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

ATP-bindingUniRule annotationSAAS annotation, DNA-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulatorImported
Gene namesi
Ordered Locus Names:PA2005Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA2005.

PTM / Processingi

Proteomic databases

PaxDbiQ9I2A4.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA2005.

Structurei

3D structure databases

ProteinModelPortaliQ9I2A4.
SMRiQ9I2A4. Positions 156-463.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini158 – 385228Sigma-54 factor interactionInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 sigma-54 factor interaction domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108JUB. Bacteria.
COG3829. LUCA.
HOGENOMiHOG000058487.
InParanoidiQ9I2A4.
OMAiWINKRYA.
OrthoDBiEOG6WHNMG.
PhylomeDBiQ9I2A4.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR027417. P-loop_NTPase.
IPR000014. PAS.
IPR013656. PAS_4.
IPR002078. Sigma_54_int.
IPR025662. Sigma_54_int_dom_ATP-bd_1.
IPR025943. Sigma_54_int_dom_ATP-bd_2.
IPR025944. Sigma_54_int_dom_CS.
[Graphical view]
PfamiPF02954. HTH_8. 1 hit.
PF08448. PAS_4. 1 hit.
PF00158. Sigma54_activat. 1 hit.
[Graphical view]
PRINTSiPR01590. HTHFIS.
SMARTiSM00382. AAA. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF55785. SSF55785. 1 hit.
PROSITEiPS00675. SIGMA54_INTERACT_1. 1 hit.
PS00676. SIGMA54_INTERACT_2. 1 hit.
PS00688. SIGMA54_INTERACT_3. 1 hit.
PS50045. SIGMA54_INTERACT_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9I2A4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDADSLQDY QRVRQQAIRS LFEIVEGSSE GTVIVDREAR IVWINQRYAQ
60 70 80 90 100
RFGLADPAQA IGRPCESVIP GSLLREVVGS GKPILLDMMD SAKDPLVVMR
110 120 130 140 150
LPIHDDAGEV IGAIGFALLD ELRSLSPLVT RYLSMQRELA STRSQLQARQ
160 170 180 190 200
AKYSFSHFVG TSPVSLEVKR RARRGAASEA PVLLLGETGT GKELLAHAIH
210 220 230 240 250
SASPRAHKAF VSVNAAAIPE SLLEAEFFGT APGAFTGAER KGRPGKLQVA
260 270 280 290 300
QGGTLFLDEI GDMPLALQGK LLRVLQEKEF EAVGSNEVIR SDIRLVAATS
310 320 330 340 350
IDLQQAMREG RFRADLYYRL NVLPIEIPPL RQRLDDLPAL CESILDSLDH
360 370 380 390 400
GRLHELGGDA LALLARHAWP GNVRELRNVL ERALLLADQR LLDAAALGAA
410 420 430 440 450
LGPLQPLPEL PRAADDRPVG DFQQAREAFE RDLIGRALAQ SAGNVVEAAK
460 470 480
RLGLGRSTLY KKIVALGMRL DSGTRLEIET N
Length:481
Mass (Da):52,444
Last modified:March 1, 2001 - v1
Checksum:i10736CAEBFFB890D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG05393.1.
PIRiB83394.
RefSeqiNP_250695.1. NC_002516.2.
WP_003113503.1. NZ_ASJY01000285.1.

Genome annotation databases

EnsemblBacteriaiAAG05393; AAG05393; PA2005.
GeneIDi879178.
KEGGipae:PA2005.
PATRICi19838417. VBIPseAer58763_2089.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG05393.1.
PIRiB83394.
RefSeqiNP_250695.1. NC_002516.2.
WP_003113503.1. NZ_ASJY01000285.1.

3D structure databases

ProteinModelPortaliQ9I2A4.
SMRiQ9I2A4. Positions 156-463.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA2005.

Proteomic databases

PaxDbiQ9I2A4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG05393; AAG05393; PA2005.
GeneIDi879178.
KEGGipae:PA2005.
PATRICi19838417. VBIPseAer58763_2089.

Organism-specific databases

PseudoCAPiPA2005.

Phylogenomic databases

eggNOGiENOG4108JUB. Bacteria.
COG3829. LUCA.
HOGENOMiHOG000058487.
InParanoidiQ9I2A4.
OMAiWINKRYA.
OrthoDBiEOG6WHNMG.
PhylomeDBiQ9I2A4.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR027417. P-loop_NTPase.
IPR000014. PAS.
IPR013656. PAS_4.
IPR002078. Sigma_54_int.
IPR025662. Sigma_54_int_dom_ATP-bd_1.
IPR025943. Sigma_54_int_dom_ATP-bd_2.
IPR025944. Sigma_54_int_dom_CS.
[Graphical view]
PfamiPF02954. HTH_8. 1 hit.
PF08448. PAS_4. 1 hit.
PF00158. Sigma54_activat. 1 hit.
[Graphical view]
PRINTSiPR01590. HTHFIS.
SMARTiSM00382. AAA. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF52540. SSF52540. 1 hit.
SSF55785. SSF55785. 1 hit.
PROSITEiPS00675. SIGMA54_INTERACT_1. 1 hit.
PS00676. SIGMA54_INTERACT_2. 1 hit.
PS00688. SIGMA54_INTERACT_3. 1 hit.
PS50045. SIGMA54_INTERACT_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228Imported.

Entry informationi

Entry nameiQ9I2A4_PSEAE
AccessioniPrimary (citable) accession number: Q9I2A4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: March 16, 2016
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.