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Protein
Submitted name:

Probable transcriptional regulator

Gene

PA2196

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi29 – 48H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulatorImported
Gene namesi
Ordered Locus Names:PA2196Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA2196.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi97 ↔ 100Combined sources

Proteomic databases

PaxDbiQ9I1S1.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA2196.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3RD3X-ray2.40A/B1-194[»]
4L62X-ray2.90A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P4-193[»]
ProteinModelPortaliQ9I1S1.
SMRiQ9I1S1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 66HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4108WUH. Bacteria.
ENOG4111IYW. LUCA.
HOGENOMiHOG000161259.
InParanoidiQ9I1S1.
KOiK16137.
OMAiQGKCLAV.
PhylomeDBiQ9I1S1.

Family and domain databases

InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
IPR011075. Tet_transcr_reg_TetR-rel_C.
PfamiView protein in Pfam
PF16925. TetR_C_13. 1 hit.
PF00440. TetR_N. 1 hit.
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiView protein in PROSITE
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9I1S1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTSYDDTRQ HLLDTGYRIM AVKGFSGVGL NEILQSAGVP KGSFYHYFKS
60 70 80 90 100
KEQFGQALLE DYFRVYLADM DQRFSAPGLN ARERLMSYWQ KWLDNACPPC
110 120 130 140 150
DEQRCLVVKL SAEVADLSES MRITLRDGSD GIIERLVGCL GQGRDDGSLA
160 170 180 190
PCDARHMASA LYQLWLGASL LSKLHRSPGP LETAMQTTRS LLEI
Length:194
Mass (Da):21,747
Last modified:March 1, 2001 - v1
Checksum:i41E57F696C5D8303
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG05584.1.
PIRiA83371.
RefSeqiNP_250886.1. NC_002516.2.
WP_003113688.1. NC_002516.2.

Genome annotation databases

EnsemblBacteriaiAAG05584; AAG05584; PA2196.
GeneIDi881967.
KEGGipae:PA2196.
PATRICifig|208964.12.peg.2300.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ9I1S1_PSEAE
AccessioniPrimary (citable) accession number: Q9I1S1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: July 5, 2017
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported