Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Probable DNA binding protein

Gene

PA3940

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Probable DNA binding proteinImported
Gene namesi
Ordered Locus Names:PA3940Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA3940.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ9HX76.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA3940.

Structurei

3D structure databases

ProteinModelPortaliQ9HX76.
SMRiQ9HX76. Positions 3-91.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial histone-like protein family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410607Q. Bacteria.
COG0776. LUCA.
HOGENOMiHOG000043828.
InParanoidiQ9HX76.
KOiK03530.
OMAiMIPARRK.
PhylomeDBiQ9HX76.

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
InterProiIPR000119. Hist_DNA-bd.
IPR010992. IHF-like_DNA-bd_dom.
[Graphical view]
PfamiPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
PRINTSiPR01727. DNABINDINGHU.
SMARTiSM00411. BHL. 1 hit.
[Graphical view]
SUPFAMiSSF47729. SSF47729. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9HX76-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALTKDQLIQ DIAEAIDAQK TTVRSALDQL AEIVKDALEN DGEITLPGIG
60 70 80 90
KLKVSERPAR TGRNPQTGKA IEIAAKRVAK FVPAKALTDA ING
Length:93
Mass (Da):9,892
Last modified:March 1, 2001 - v1
Checksum:i5728CD973EC61478
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG07327.1.
PIRiH83152.
RefSeqiNP_252629.1. NC_002516.2.
WP_003093079.1. NZ_ASJY01000624.1.

Genome annotation databases

EnsemblBacteriaiAAG07327; AAG07327; PA3940.
GeneIDi878829.
KEGGipae:PA3940.
PATRICi19842545. VBIPseAer58763_4129.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG07327.1.
PIRiH83152.
RefSeqiNP_252629.1. NC_002516.2.
WP_003093079.1. NZ_ASJY01000624.1.

3D structure databases

ProteinModelPortaliQ9HX76.
SMRiQ9HX76. Positions 3-91.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA3940.

Proteomic databases

PaxDbiQ9HX76.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG07327; AAG07327; PA3940.
GeneIDi878829.
KEGGipae:PA3940.
PATRICi19842545. VBIPseAer58763_4129.

Organism-specific databases

PseudoCAPiPA3940.

Phylogenomic databases

eggNOGiENOG410607Q. Bacteria.
COG0776. LUCA.
HOGENOMiHOG000043828.
InParanoidiQ9HX76.
KOiK03530.
OMAiMIPARRK.
PhylomeDBiQ9HX76.

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
InterProiIPR000119. Hist_DNA-bd.
IPR010992. IHF-like_DNA-bd_dom.
[Graphical view]
PfamiPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
PRINTSiPR01727. DNABINDINGHU.
SMARTiSM00411. BHL. 1 hit.
[Graphical view]
SUPFAMiSSF47729. SSF47729. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9HX76_PSEAE
AccessioniPrimary (citable) accession number: Q9HX76
Secondary accession number(s): Q7BEQ5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: September 7, 2016
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.