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Protein

Endolytic peptidoglycan transglycosylase RlpA

Gene

rlpA

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotation
Biological processCell wall biogenesis/degradationUniRule annotation

Enzyme and pathway databases

BioCyciPAER208964:G1FZ6-4574-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Endolytic peptidoglycan transglycosylase RlpAUniRule annotation (EC:4.2.2.-UniRule annotation)
Gene namesi
Name:rlpAUniRule annotation
Ordered Locus Names:PA4485Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA4485

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26UniRule annotationAdd BLAST26
ChainiPRO_500999266227 – 125Endolytic peptidoglycan transglycosylase RlpAUniRule annotationAdd BLAST99

Proteomic databases

PaxDbiQ9HVT6

Interactioni

Protein-protein interaction databases

STRINGi208964.PA4485

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4AVRX-ray1.08A/B32-125[»]
ProteinModelPortaliQ9HVT6
SMRiQ9HVT6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 121DPBB_1InterPro annotationAdd BLAST89

Sequence similaritiesi

Belongs to the RlpA family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiENOG4105K6T Bacteria
COG0797 LUCA
HOGENOMiHOG000254768
InParanoidiQ9HVT6
KOiK03642
OMAiFAGNGCG
PhylomeDBiQ9HVT6

Family and domain databases

Gene3Di2.40.40.10, 1 hit
HAMAPiMF_02071 RlpA, 1 hit
InterProiView protein in InterPro
IPR034718 RlpA
IPR009009 RlpA-like_DPBB
IPR036908 RlpA-like_sf
IPR012997 RplA
PfamiView protein in Pfam
PF03330 DPBB_1, 1 hit
SUPFAMiSSF50685 SSF50685, 1 hit
TIGRFAMsiTIGR00413 rlpA, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9HVT6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTPSAAARL ALAVLPLFLA GCSSLAGSGS ADTGEASYYG SRHAGLRTAS
60 70 80 90 100
GERYNPNAMT AAHRTLPFGA RVRVTNLDNR RSVVVRINDR GPFRRGRIID
110 120
VSRKAAEGLG MIRSGVAPVR IESLD
Length:125
Mass (Da):13,221
Last modified:March 1, 2001 - v1
Checksum:i30F35A7A064F5F2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA Translation: AAG07873.1
PIRiB83085
RefSeqiNP_253175.1, NC_002516.2
WP_003112869.1, NC_002516.2

Genome annotation databases

EnsemblBacteriaiAAG07873; AAG07873; PA4485
GeneIDi881190
KEGGipae:PA4485
PATRICifig|208964.12.peg.4695

Similar proteinsi

Entry informationi

Entry nameiQ9HVT6_PSEAE
AccessioniPrimary (citable) accession number: Q9HVT6
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: March 28, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

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