Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

PA4485

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:PA4485Imported
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Imported
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA4485.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA4485.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4AVRX-ray1.08A/B32-125[»]
ProteinModelPortaliQ9HVT6.
SMRiQ9HVT6. Positions 32-124.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the rlpA family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000254768.
InParanoidiQ9HVT6.
KOiK03642.
OMAiGEASYYG.
OrthoDBiEOG6X3W9K.
PhylomeDBiQ9HVT6.

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
InterProiIPR014733. Barwin-like_endoglucanase.
IPR009009. RlpA-like_DPBB.
IPR012997. RplA_bac.
[Graphical view]
PfamiPF03330. DPBB_1. 1 hit.
[Graphical view]
SUPFAMiSSF50685. SSF50685. 1 hit.
TIGRFAMsiTIGR00413. rlpA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9HVT6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTPSAAARL ALAVLPLFLA GCSSLAGSGS ADTGEASYYG SRHAGLRTAS
60 70 80 90 100
GERYNPNAMT AAHRTLPFGA RVRVTNLDNR RSVVVRINDR GPFRRGRIID
110 120
VSRKAAEGLG MIRSGVAPVR IESLD
Length:125
Mass (Da):13,221
Last modified:March 1, 2001 - v1
Checksum:i30F35A7A064F5F2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG07873.1.
PIRiB83085.
RefSeqiNP_253175.1. NC_002516.2.

Genome annotation databases

EnsemblBacteriaiAAG07873; AAG07873; PA4485.
GeneIDi881190.
KEGGipae:PA4485.
PATRICi19843697. VBIPseAer58763_4695.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG07873.1.
PIRiB83085.
RefSeqiNP_253175.1. NC_002516.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4AVRX-ray1.08A/B32-125[»]
ProteinModelPortaliQ9HVT6.
SMRiQ9HVT6. Positions 32-124.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA4485.

Protocols and materials databases

DNASUi881190.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG07873; AAG07873; PA4485.
GeneIDi881190.
KEGGipae:PA4485.
PATRICi19843697. VBIPseAer58763_4695.

Organism-specific databases

PseudoCAPiPA4485.

Phylogenomic databases

HOGENOMiHOG000254768.
InParanoidiQ9HVT6.
KOiK03642.
OMAiGEASYYG.
OrthoDBiEOG6X3W9K.
PhylomeDBiQ9HVT6.

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
InterProiIPR014733. Barwin-like_endoglucanase.
IPR009009. RlpA-like_DPBB.
IPR012997. RplA_bac.
[Graphical view]
PfamiPF03330. DPBB_1. 1 hit.
[Graphical view]
SUPFAMiSSF50685. SSF50685. 1 hit.
TIGRFAMsiTIGR00413. rlpA. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228Imported.
  2. "The AEROPATH project targeting Pseudomonas aeruginosa: crystallographic studies for assessment of potential targets in early-stage drug discovery."
    Moynie L., Schnell R., McMahon S.A., Sandalova T., Boulkerou W.A., Schmidberger J.W., Alphey M., Cukier C., Duthie F., Kopec J., Liu H., Jacewicz A., Hunter W.N., Naismith J.H., Schneider G.
    Acta Crystallogr. F 69:25-34(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.08 ANGSTROMS) OF 32-125.

Entry informationi

Entry nameiQ9HVT6_PSEAE
AccessioniPrimary (citable) accession number: Q9HVT6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: January 7, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.