Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

UPF0271 protein PA4511

Gene

PA4511

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0271 protein PA4511UniRule annotation
Gene namesi
Ordered Locus Names:PA4511
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA4511.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 251251UPF0271 protein PA4511PRO_0000185027Add
BLAST

Proteomic databases

PaxDbiQ9HVR0.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA4511.

Structurei

Secondary structure

1
251
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi9 – 146Combined sources
Helixi26 – 294Combined sources
Helixi30 – 323Combined sources
Beta strandi34 – 396Combined sources
Beta strandi41 – 444Combined sources
Helixi47 – 5913Combined sources
Beta strandi63 – 675Combined sources
Turni73 – 775Combined sources
Helixi85 – 10521Combined sources
Helixi117 – 1259Combined sources
Helixi127 – 14014Combined sources
Beta strandi146 – 1494Combined sources
Helixi155 – 16410Combined sources
Beta strandi168 – 1769Combined sources
Beta strandi182 – 1843Combined sources
Beta strandi187 – 1893Combined sources
Helixi197 – 20913Combined sources
Beta strandi212 – 2143Combined sources
Beta strandi220 – 2223Combined sources
Beta strandi226 – 2294Combined sources
Beta strandi232 – 2343Combined sources
Helixi235 – 2395Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2XU2X-ray2.30A2-251[»]
ProteinModelPortaliQ9HVR0.
SMRiQ9HVR0. Positions 7-247.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9HVR0.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0271 (lamB) family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105E7W. Bacteria.
COG1540. LUCA.
HOGENOMiHOG000237330.
InParanoidiQ9HVR0.
KOiK07160.
OMAiEVHAMVL.
OrthoDBiEOG6CZQJG.
PhylomeDBiQ9HVR0.

Family and domain databases

HAMAPiMF_00691. UPF0271.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR005501. UPF0271_LamB_YcsF.
[Graphical view]
PfamiPF03746. LamB_YcsF. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9HVR0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDTGRRILL NCDMGESFGA WRMGDDVHSM PLVDQANLAC GFHAGDPLTM
60 70 80 90 100
RRAVELAVRH GVSIGAHPAY PDLSGFGRRS LACSAEEVHA MVLYQIGALD
110 120 130 140 150
AFCRSLGTQV AYVKPHGALY NDLVGDDELL RAVLDACAAY RKGLPLMVLA
160 170 180 190 200
LADNGRELEL ADEADVPLLF EAFADRAYLP DGRLAPRRLG GAVHHDPQRI
210 220 230 240 250
IEQALAIARG EAFPDYDGNP LRLTADSLCV HGDNPQSLAV LRRLRAALDS

L
Length:251
Mass (Da):27,166
Last modified:March 1, 2001 - v1
Checksum:iE1AF77EEE2EB4655
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG07899.1.
PIRiC83083.
RefSeqiNP_253201.1. NC_002516.2.
WP_003112852.1. NZ_ASJY01000734.1.

Genome annotation databases

EnsemblBacteriaiAAG07899; AAG07899; PA4511.
GeneIDi881154.
KEGGipae:PA4511.
PATRICi19843749. VBIPseAer58763_4721.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA. Translation: AAG07899.1.
PIRiC83083.
RefSeqiNP_253201.1. NC_002516.2.
WP_003112852.1. NZ_ASJY01000734.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2XU2X-ray2.30A2-251[»]
ProteinModelPortaliQ9HVR0.
SMRiQ9HVR0. Positions 7-247.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA4511.

Proteomic databases

PaxDbiQ9HVR0.

Protocols and materials databases

DNASUi881154.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG07899; AAG07899; PA4511.
GeneIDi881154.
KEGGipae:PA4511.
PATRICi19843749. VBIPseAer58763_4721.

Organism-specific databases

PseudoCAPiPA4511.

Phylogenomic databases

eggNOGiENOG4105E7W. Bacteria.
COG1540. LUCA.
HOGENOMiHOG000237330.
InParanoidiQ9HVR0.
KOiK07160.
OMAiEVHAMVL.
OrthoDBiEOG6CZQJG.
PhylomeDBiQ9HVR0.

Miscellaneous databases

EvolutionaryTraceiQ9HVR0.

Family and domain databases

HAMAPiMF_00691. UPF0271.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR005501. UPF0271_LamB_YcsF.
[Graphical view]
PfamiPF03746. LamB_YcsF. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.

Entry informationi

Entry nameiY4511_PSEAE
AccessioniPrimary (citable) accession number: Q9HVR0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 4, 2003
Last sequence update: March 1, 2001
Last modified: November 11, 2015
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.