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Protein

Uncharacterized HTH-type transcriptional regulator PA4778

Gene

PA4778

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi4 – 23H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

  • positive regulation of transcription, DNA-templated Source: PseudoCAP
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciPAER208964:G1FZ6-4891-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator PA4778
Gene namesi
Ordered Locus Names:PA4778
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA4778

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: UniProtKB-SubCell
  • protein-DNA complex Source: CollecTF

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000981721 – 132Uncharacterized HTH-type transcriptional regulator PA4778Add BLAST132

Proteomic databases

PaxDbiQ9HV30

Expressioni

Gene expression databases

CollecTFiEXPREG_00001590

Interactioni

Protein-protein interaction databases

STRINGi208964.PA4778

Structurei

3D structure databases

ProteinModelPortaliQ9HV30
SMRiQ9HV30
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 69HTH merR-typePROSITE-ProRule annotationAdd BLAST69

Domaini

It contains a N-terminal DNA binding region and a C-terminal metal binding region.By similarity

Phylogenomic databases

eggNOGiENOG4108Z6Z Bacteria
COG0789 LUCA
HOGENOMiHOG000266076
InParanoidiQ9HV30
KOiK19591
OMAiFIKCMRN
PhylomeDBiQ9HV30

Family and domain databases

CDDicd01108 HTH_CueR, 1 hit
InterProiView protein in InterPro
IPR011789 CueR
IPR009061 DNA-bd_dom_put_sf
IPR000551 MerR-type_HTH_dom
IPR015358 Tscrpt_reg_MerR_DNA-bd
PfamiView protein in Pfam
PF00376 MerR, 1 hit
PF09278 MerR-DNA-bind, 1 hit
PRINTSiPR00040 HTHMERR
SMARTiView protein in SMART
SM00422 HTH_MERR, 1 hit
SUPFAMiSSF46955 SSF46955, 1 hit
TIGRFAMsiTIGR02044 CueR, 1 hit
PROSITEiView protein in PROSITE
PS50937 HTH_MERR_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q9HV30-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIGEAAKKS GLTPKMIRYY ESIELLRPAG RSASGYRHYN ENDLHTLAFI
60 70 80 90 100
RRSRDLGFSL DEVGKLLTLW QDRQRASADV KALAAQHVRE LNRKIEELST
110 120 130
LRDTLQDLVE HCQGDHRPDC PILKDLASGC CH
Length:132
Mass (Da):15,015
Last modified:March 1, 2001 - v1
Checksum:i058ECD37D200CBEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA Translation: AAG08164.1
PIRiH83048
RefSeqiNP_253466.1, NC_002516.2
WP_003095248.1, NC_002516.2

Genome annotation databases

EnsemblBacteriaiAAG08164; AAG08164; PA4778
GeneIDi881842
KEGGipae:PA4778
PATRICifig|208964.12.peg.5005

Similar proteinsi

Entry informationi

Entry nameiY4778_PSEAE
AccessioniPrimary (citable) accession number: Q9HV30
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 3, 2002
Last sequence update: March 1, 2001
Last modified: March 28, 2018
This is version 100 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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