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Q9HUK6 (Q9HUK6_PSEAE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 92. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length691 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding478 – 4792Cyclic diguanosine monophosphate PDB 3HV8
Nucleotide binding652 – 6543Cyclic diguanosine monophosphate PDB 3HV8
Region565 – 5673Phosphate 2 binding PDB 4AG0

Sites

Binding site4611Cyclic diguanosine monophosphate PDB 3HV8
Binding site4611Phosphate 1 PDB 4AG0
Binding site5071Cyclic diguanosine monophosphate PDB 3HV8
Binding site5331Cyclic diguanosine monophosphate PDB 3HV8
Binding site5341Phosphate 2; via amide nitrogen and carbonyl oxygen PDB 4AG0
Binding site5951Phosphate 2 PDB 4AG0
Binding site6521Phosphate 1 PDB 4AG0
Binding site6711Phosphate 1 PDB 4AG0
Binding site6731Cyclic diguanosine monophosphate PDB 3HV8

Sequences

Sequence LengthMass (Da)Tools
Q9HUK6 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 518BAFE4C8977B43

FASTA69175,993
        10         20         30         40         50         60 
MAIEKKTIRL LILEDSQNEA ERLVSLFRNA GHATRVHRLT SPEDLAETLQ QSWDLLIAAP 

        70         80         90        100        110        120 
TSECLEPGEA LATLRRQSRD IPFIQLVADN SSDAITDALM LGAQDALPQG EDERLVLVAN 

       130        140        150        160        170        180 
RELAGLAERR ARRAAELALR EAEKRCQLLL DSSVDAITYV HDGMHIYANR SYMALFGYED 

       190        200        210        220        230        240 
AEELEGLPVI DLIASCDQGA FKDFLKGYQN DQRQTELVCT GVKLDGQEFK ARISLSAATY 

       250        260        270        280        290        300 
DGEPCIQVVI RGEVDNAELE EKLREVSSQD PVTGLYNRSH FLDLMDAAVQ QAVTARKPST 

       310        320        330        340        350        360 
LAYIHLNGYP SLQADHGLSG IDLLLGQLAG LMREQFGEEA DLARFGDSIF AALFKGKTPE 

       370        380        390        400        410        420 
QAQAALQRLL KKVENHLFEL NGRSAQATLS IGVAGLDEKT AKAQDVMNRA HRCADDAARK 

       430        440        450        460        470        480 
GGSQIKQYNP AEELAAAAQR GDVIAILQQA LETNSFRLLF QPVISLRGDS HENYEVLLRL 

       490        500        510        520        530        540 
LNPQGQEVPP AEFLHAAKEA GLAEKIDRWV ILNSIKLLAE HRAKGHQTKL FVHLSSASLQ 

       550        560        570        580        590        600 
DPGLLPWLGV ALKAARLPPE SLVFQISEAD ATSYLKQAKQ LTQGLATLHC QAAISQFGCS 

       610        620        630        640        650        660 
LNPFNALKHL TVQFIKIDGS FVQDLNQVEN QEILKGLIAE LHEQQKLSIV PFVESASVLA 

       670        680        690 
TLWQAGATYI QGYYLQGPSQ AMDYDFSSGD E 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen."
Stover C.K., Pham X.Q., Erwin A.L., Mizoguchi S.D., Warrener P., Hickey M.J., Brinkman F.S., Hufnagle W.O., Kowalik D.J., Lagrou M., Garber R.L., Goltry L., Tolentino E., Westbrock-Wadman S., Yuan Y., Brody L.L., Coulter S.N., Folger K.R. expand/collapse author list , Kas A., Larbig K., Lim R., Smith K., Spencer D., Wong G.K., Wu Z., Paulsen I.T., Reizer J., Saier M.H., Hancock R.E., Lory S., Olson M.V.
Nature 406:959-964(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.
[2]"Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX."
Navarro M.V., De N., Bae N., Wang Q., Sondermann H.
Structure 17:1104-1116(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.44 ANGSTROMS) OF 429-691.
[3]"Crystal structure of an EAL domain in complex with reaction product 5'-pGpG."
Robert-Paganin J., Nonin-Lecomte S., Rety S.
PLoS ONE 7:e52424-e52424(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.01 ANGSTROMS) OF 439-691 IN COMPLEX WITH PHOSPHATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE004091 Genomic DNA. Translation: AAG08344.1.
PIRE83027.
RefSeqNP_253646.1. NC_002516.2.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3HV8X-ray1.44A429-691[»]
3HV9X-ray2.30A429-691[»]
3HVAX-ray2.04A/B260-431[»]
4AFYX-ray2.01A/B439-691[»]
4AG0X-ray2.30A/B439-691[»]
4J40X-ray2.99A/B260-691[»]
ProteinModelPortalQ9HUK6.
SMRQ9HUK6. Positions 7-123, 255-686.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-48302N.
STRING208964.PA4959.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAG08344; AAG08344; PA4959.
GeneID878416.
KEGGpae:PA4959.
PATRIC19844728. VBIPseAer58763_5193.

Organism-specific databases

PseudoCAPPA4959.

Phylogenomic databases

HOGENOMHOG000225944.
OMAACKRINE.
OrthoDBEOG69GZGV.
PhylomeDBQ9HUK6.

Family and domain databases

Gene3D3.20.20.450. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR011006. CheY-like_superfamily.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR000160. GGDEF_dom.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
SSF52172. SSF52172. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ9HUK6.

Entry information

Entry nameQ9HUK6_PSEAE
AccessionPrimary (citable) accession number: Q9HUK6
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: July 9, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)