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Protein

Ribonuclease P protein component 2

Gene

rnp2

Organism
Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (Halobacterium halobium)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.UniRule annotation

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

tRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P protein component 2UniRule annotation (EC:3.1.26.5UniRule annotation)
Short name:
RNase P component 2UniRule annotation
Alternative name(s):
Pop5UniRule annotation
Gene namesi
Name:rnp2UniRule annotation
Ordered Locus Names:VNG_1279H
OrganismiHalobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (Halobacterium halobium)
Taxonomic identifieri64091 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHalobacterium
ProteomesiUP000000554 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 164164Ribonuclease P protein component 2PRO_0000140018Add
BLAST

Proteomic databases

PaxDbiQ9HQ86.

Interactioni

Subunit structurei

Consists of a catalytic RNA component and at least 4-5 protein subunits.UniRule annotation

Protein-protein interaction databases

STRINGi64091.VNG1279H.

Structurei

3D structure databases

ProteinModelPortaliQ9HQ86.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic/archaeal RNase P protein component 2 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1369.
InParanoidiQ9HQ86.
KOiK03537.
OMAiQRELWYA.

Family and domain databases

HAMAPiMF_00755. RNase_P_2.
InterProiIPR002759. RNase_P/MRP_subunit.
[Graphical view]
PfamiPF01900. RNase_P_Rpp14. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9HQ86-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKHLPKHVRP RWRYLAVGIE AWPDAGIERS DFQRALWFAA GNLLGDPGSA
60 70 80 90 100
DAGVRVVAYS FRDGRGEALV RARRGTVSRA RAAVACVSAV REHPVRVCVR
110 120 130 140 150
GVSGTMRAAR ERYLDGLDTP ERRSDVAFDG DARDGVCRGE NVDVVAGDDG
160
WVGARRRDCG TDGE
Length:164
Mass (Da):17,891
Last modified:March 1, 2001 - v1
Checksum:i2BFBF95D64972F5B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004437 Genomic DNA. Translation: AAG19630.1.
PIRiB84283.
RefSeqiNP_280150.1. NC_002607.1.
WP_010902926.1. NC_002607.1.

Genome annotation databases

EnsemblBacteriaiAAG19630; AAG19630; VNG_1279H.
GeneIDi1447929.
KEGGihal:VNG1279H.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004437 Genomic DNA. Translation: AAG19630.1.
PIRiB84283.
RefSeqiNP_280150.1. NC_002607.1.
WP_010902926.1. NC_002607.1.

3D structure databases

ProteinModelPortaliQ9HQ86.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi64091.VNG1279H.

Proteomic databases

PaxDbiQ9HQ86.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG19630; AAG19630; VNG_1279H.
GeneIDi1447929.
KEGGihal:VNG1279H.

Phylogenomic databases

eggNOGiCOG1369.
InParanoidiQ9HQ86.
KOiK03537.
OMAiQRELWYA.

Family and domain databases

HAMAPiMF_00755. RNase_P_2.
InterProiIPR002759. RNase_P/MRP_subunit.
[Graphical view]
PfamiPF01900. RNase_P_Rpp14. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700922 / JCM 11081 / NRC-1.

Entry informationi

Entry nameiRNP2_HALSA
AccessioniPrimary (citable) accession number: Q9HQ86
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: March 1, 2001
Last modified: May 27, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.