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Q9HNQ0

- PDAD_HALSA

UniProt

Q9HNQ0 - PDAD_HALSA

Protein

Pyruvoyl-dependent arginine decarboxylase

Gene

pdaD

Organism
Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (Halobacterium halobium)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 71 (01 Oct 2014)
      Sequence version 1 (01 Mar 2001)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-arginine = agmatine + CO2.

    Cofactori

    Pyruvoyl group.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sitei38 – 392Cleavage (non-hydrolytic)By similarity

    GO - Molecular functioni

    1. arginine decarboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. arginine catabolic process Source: InterPro

    Keywords - Molecular functioni

    Decarboxylase, Lyase

    Keywords - Ligandi

    Pyruvate

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Pyruvoyl-dependent arginine decarboxylase (EC:4.1.1.19)
    Short name:
    PvlArgDC
    Cleaved into the following 2 chains:
    Gene namesi
    Name:pdaD
    Ordered Locus Names:VNG_1999H
    OrganismiHalobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (Halobacterium halobium)
    Taxonomic identifieri64091 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHalobacterium
    ProteomesiUP000000554: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 3838Pyruvoyl-dependent arginine decarboxylase subunit betaBy similarityPRO_0000023308Add
    BLAST
    Chaini39 – 160122Pyruvoyl-dependent arginine decarboxylase subunit alphaBy similarityPRO_0000023309Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei39 – 391Pyruvic acid (Ser)By similarity

    Proteomic databases

    PaxDbiQ9HNQ0.

    Interactioni

    Protein-protein interaction databases

    STRINGi64091.VNG1999H.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9HNQ0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PdaD family.Curated

    Phylogenomic databases

    eggNOGiCOG1945.
    KOiK02626.
    OMAiAANIHNY.

    Family and domain databases

    Gene3Di3.50.20.10. 1 hit.
    InterProiIPR016104. Pyr-dep_his/arg-deCO2ase.
    IPR016105. Pyr-dep_his/arg-deCO2ase_sand.
    IPR002724. Pyruvoyl-dep_arg_deCO2ase.
    [Graphical view]
    PfamiPF01862. PvlArgDC. 1 hit.
    [Graphical view]
    PIRSFiPIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    ProDomiPD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF56271. SSF56271. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9HNQ0-1 [UniParc]FASTAAdd to Basket

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    MPRIRIAWGS GVAPTEMAAY DAALADANVH NYNLIRVSSV IPADATVSPV    50
    DTAPDLGPAG NTLTVVEARG QTAGPGQASA GLAWAPRDGA PGLFYEAADE 100
    TTPDDVADRV TTGITAGMDV RDWDGVEPSV RTETVTADAG EHAAAVVIAA 150
    YGDSDPVFDQ 160
    Length:160
    Mass (Da):16,364
    Last modified:March 1, 2001 - v1
    Checksum:iB77749F3A1E97BCD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE004437 Genomic DNA. Translation: AAG20170.1.
    PIRiF84350.
    RefSeqiNP_280690.1. NC_002607.1.

    Genome annotation databases

    EnsemblBacteriaiAAG20170; AAG20170; VNG_1999H.
    GeneIDi1448473.
    KEGGihal:VNG1999H.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE004437 Genomic DNA. Translation: AAG20170.1 .
    PIRi F84350.
    RefSeqi NP_280690.1. NC_002607.1.

    3D structure databases

    ProteinModelPortali Q9HNQ0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 64091.VNG1999H.

    Proteomic databases

    PaxDbi Q9HNQ0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAG20170 ; AAG20170 ; VNG_1999H .
    GeneIDi 1448473.
    KEGGi hal:VNG1999H.

    Phylogenomic databases

    eggNOGi COG1945.
    KOi K02626.
    OMAi AANIHNY.

    Family and domain databases

    Gene3Di 3.50.20.10. 1 hit.
    InterProi IPR016104. Pyr-dep_his/arg-deCO2ase.
    IPR016105. Pyr-dep_his/arg-deCO2ase_sand.
    IPR002724. Pyruvoyl-dep_arg_deCO2ase.
    [Graphical view ]
    Pfami PF01862. PvlArgDC. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    ProDomi PD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF56271. SSF56271. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700922 / JCM 11081 / NRC-1.

    Entry informationi

    Entry nameiPDAD_HALSA
    AccessioniPrimary (citable) accession number: Q9HNQ0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 11, 2002
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 71 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3