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Q9HK30

- PDAD_THEAC

UniProt

Q9HK30 - PDAD_THEAC

Protein

Pyruvoyl-dependent arginine decarboxylase

Gene

pdaD

Organism
Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 67 (01 Oct 2014)
      Sequence version 2 (11 Jul 2002)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-arginine = agmatine + CO2.UniRule annotation

    Cofactori

    Pyruvoyl group.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sitei43 – 442Cleavage (non-hydrolytic)UniRule annotation

    GO - Molecular functioni

    1. arginine decarboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginine catabolic process Source: InterPro

    Keywords - Molecular functioni

    Decarboxylase, Lyase

    Keywords - Ligandi

    Pyruvate

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Pyruvoyl-dependent arginine decarboxylaseUniRule annotation (EC:4.1.1.19UniRule annotation)
    Short name:
    PvlArgDCUniRule annotation
    Cleaved into the following 2 chains:
    Pyruvoyl-dependent arginine decarboxylase subunit betaUniRule annotation
    Pyruvoyl-dependent arginine decarboxylase subunit alphaUniRule annotation
    Gene namesi
    Name:pdaDUniRule annotation
    Ordered Locus Names:Ta0778
    OrganismiThermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
    Taxonomic identifieri273075 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaThermoplasmataThermoplasmatalesThermoplasmataceaeThermoplasma
    ProteomesiUP000001024: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 4343Pyruvoyl-dependent arginine decarboxylase subunit betaUniRule annotationPRO_0000023336Add
    BLAST
    Chaini44 – 182139Pyruvoyl-dependent arginine decarboxylase subunit alphaUniRule annotationPRO_0000023337Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei44 – 441Pyruvic acid (Ser)UniRule annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi273075.Ta0778.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9HK30.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PdaD family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1945.
    HOGENOMiHOG000012204.
    KOiK02626.
    OMAiMITREEG.

    Family and domain databases

    Gene3Di3.50.20.10. 1 hit.
    HAMAPiMF_01404. PvlArgDC.
    InterProiIPR016104. Pyr-dep_his/arg-deCO2ase.
    IPR016105. Pyr-dep_his/arg-deCO2ase_sand.
    IPR002724. Pyruvoyl-dep_arg_deCO2ase.
    [Graphical view]
    PfamiPF01862. PvlArgDC. 1 hit.
    [Graphical view]
    PIRSFiPIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    ProDomiPD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF56271. SSF56271. 1 hit.
    TIGRFAMsiTIGR00286. TIGR00286. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9HK30-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSGFVPTHIF FTRGVGRGET QLVSFEAALR DAGIAPYNLS SISSIFPPHA    50
    EMITREEGLK KLSPGQILFT VLARNTSNEL NRMVSAAIGY AIPRDRSKWG 100
    YLSEHHSFGE TEKVAGSFAE KLAAEMLAST IGSSAQLAYD KQKEEYVLED 150
    KILTTGSISS TAVVLESGEW TTVVAAAVLI VE 182
    Length:182
    Mass (Da):19,672
    Last modified:July 11, 2002 - v2
    Checksum:i2053EE343EE41B89
    GO

    Sequence cautioni

    The sequence CAC11909.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL445065 Genomic DNA. Translation: CAC11909.1. Different initiation.
    RefSeqiNP_394240.1. NC_002578.1.

    Genome annotation databases

    EnsemblBacteriaiCAC11909; CAC11909; CAC11909.
    GeneIDi1456332.
    KEGGitac:Ta0778.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL445065 Genomic DNA. Translation: CAC11909.1 . Different initiation.
    RefSeqi NP_394240.1. NC_002578.1.

    3D structure databases

    ProteinModelPortali Q9HK30.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 273075.Ta0778.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAC11909 ; CAC11909 ; CAC11909 .
    GeneIDi 1456332.
    KEGGi tac:Ta0778.

    Phylogenomic databases

    eggNOGi COG1945.
    HOGENOMi HOG000012204.
    KOi K02626.
    OMAi MITREEG.

    Family and domain databases

    Gene3Di 3.50.20.10. 1 hit.
    HAMAPi MF_01404. PvlArgDC.
    InterProi IPR016104. Pyr-dep_his/arg-deCO2ase.
    IPR016105. Pyr-dep_his/arg-deCO2ase_sand.
    IPR002724. Pyruvoyl-dep_arg_deCO2ase.
    [Graphical view ]
    Pfami PF01862. PvlArgDC. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    ProDomi PD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF56271. SSF56271. 1 hit.
    TIGRFAMsi TIGR00286. TIGR00286. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum."
      Ruepp A., Graml W., Santos-Martinez M.-L., Koretke K.K., Volker C., Mewes H.-W., Frishman D., Stocker S., Lupas A.N., Baumeister W.
      Nature 407:508-513(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165.

    Entry informationi

    Entry nameiPDAD_THEAC
    AccessioniPrimary (citable) accession number: Q9HK30
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 11, 2002
    Last sequence update: July 11, 2002
    Last modified: October 1, 2014
    This is version 67 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3