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Protein

30S ribosomal protein S27ae

Gene

rps27ae

Organism
Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Cofactori

Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi21ZincUniRule annotation1
Metal bindingi24ZincUniRule annotation1
Metal bindingi39ZincUniRule annotation1
Metal bindingi42ZincUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri21 – 42C4-typeUniRule annotationAdd BLAST22

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein
LigandMetal-binding, Zinc

Enzyme and pathway databases

BioCyciTACI273075:G1GT7-1203-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S27aeUniRule annotation
Gene namesi
Name:rps27aeUniRule annotation
Ordered Locus Names:Ta1093
OrganismiThermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Taxonomic identifieri273075 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermoplasmataThermoplasmatalesThermoplasmataceaeThermoplasma
Proteomesi
  • UP000001024 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001377091 – 5530S ribosomal protein S27aeAdd BLAST55

Proteomic databases

PRIDEiQ9HJ78

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi273075.Ta1093

Structurei

Secondary structure

155
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Turni22 – 27Combined sources6
Beta strandi34 – 38Combined sources5
Turni40 – 42Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2K4XNMR-A1-55[»]
ProteinModelPortaliQ9HJ78
SMRiQ9HJ78
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9HJ78

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS31 family.UniRule annotation

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri21 – 42C4-typeUniRule annotationAdd BLAST22

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiarCOG04183 Archaea
COG1998 LUCA
HOGENOMiHOG000223075
KOiK02977
OMAiGVFMAEH
OrthoDBiPOG093Z028X

Family and domain databases

Gene3Di2.20.25.660, 1 hit
HAMAPiMF_00777 Ribosomal_S27ae, 1 hit
InterProiView protein in InterPro
IPR002906 Ribosomal_S27a
IPR022845 Ribosomal_S27ae
IPR011332 Ribosomal_zn-bd
IPR038582 S27a-like_sf
PfamiView protein in Pfam
PF01599 Ribosomal_S27, 1 hit
SMARTiView protein in SMART
SM01402 Ribosomal_S27, 1 hit
SUPFAMiSSF57829 SSF57829, 1 hit

Sequencei

Sequence statusi: Complete.

Q9HJ78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQKRELYEIA DGKLVRKHRF CPRCGPGVFL AEHADRYSCG RCGYTEFKKA

KKSKS
Length:55
Mass (Da):6,381
Last modified:March 1, 2001 - v1
Checksum:iD7CA22835955239D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL445066 Genomic DNA Translation: CAC12221.1
RefSeqiWP_010901503.1, NC_002578.1

Genome annotation databases

EnsemblBacteriaiCAC12221; CAC12221; CAC12221
GeneIDi1456603
KEGGitac:Ta1093

Similar proteinsi

Entry informationi

Entry nameiRS27A_THEAC
AccessioniPrimary (citable) accession number: Q9HJ78
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: March 1, 2001
Last modified: May 23, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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