Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q9HGN3 (TLG1_SCHPO) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
t-SNARE affecting a late Golgi compartment protein 1
Alternative name(s):
Syntaxin tlg1
Gene names
Name:tlg1
ORF Names:SPBC36B7.07
OrganismSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) [Reference proteome]
Taxonomic identifier284812 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces ›

Protein attributes

Sequence length225 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Golgi apparatus › trans-Golgi network membrane; Single-pass type IV membrane protein By similarity. Endosome membrane; Single-pass type IV membrane protein By similarity. Note: Probably shuttling between TGN and early/late endosome By similarity.

Sequence similarities

Belongs to the syntaxin family.

Contains 1 t-SNARE coiled-coil homology domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 225225t-SNARE affecting a late Golgi compartment protein 1
PRO_0000210276

Regions

Topological domain1 – 204204Cytoplasmic Potential
Transmembrane205 – 22521Helical; Anchor for type IV membrane protein; Potential
Domain133 – 19563t-SNARE coiled-coil homology
Coiled coil38 – 6831 Potential

Sequences

Sequence LengthMass (Da)Tools
Q9HGN3 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 0A39E08DA6CEAD08

FASTA22524,970
        10         20         30         40         50         60 
MEDPFYEVKA DASNQMEQVR KLYNSFMAAR NSGVLSPNTE LTYAIDELSE TLKDLKAAVE 

        70         80         90        100        110        120 
IAMKNSEHFG LDEEELKSRR RFVSELDIEL NNIQLKMGAA PSTPVSTEPY TVDNGASAGL 

       130        140        150        160        170        180 
SEEDHAVNRQ YQEQLYQQQD VMLDGVYDTI GNIRGQAALM GEELGQQADL LDTLDNSIET 

       190        200        210        220 
TNSKLRRGMK RLKDFTIASA DSKSGCCITV LIIILIALLV LVIVL

« Hide

References

[1]"The genome sequence of Schizosaccharomyces pombe."
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. expand/collapse author list , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 972 / ATCC 24843.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU329671 Genomic DNA. Translation: CAC05728.1.
RefSeqNP_595989.1. NM_001021896.2.

3D structure databases

ProteinModelPortalQ9HGN3.
ModBaseSearch...

Protein-protein interaction databases

MINTMINT-4703317.
STRING4896.SPBC36B7.07-1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiSPBC36B7.07.1; SPBC36B7.07.1:pep; SPBC36B7.07.
GeneID2540973.
KEGGspo:SPBC36B7.07.

Organism-specific databases

PomBaseSPBC36B7.07.

Phylogenomic databases

eggNOGNOG255847.
KOK08499.
OMAKMICIAV.
OrthoDBEOG4X3MB5.

Family and domain databases

InterProIPR015260. Syntaxin-6_N.
IPR010989. t-SNARE.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF05739. SNARE. 1 hit.
PF09177. Syntaxin-6_N. 1 hit.
[Graphical view]
SUPFAMSSF47661. t-snare. 1 hit.
PROSITEPS00914. SYNTAXIN. False negative.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20802088.

Entry information

Entry nameTLG1_SCHPO
AccessionPrimary (citable) accession number: Q9HGN3
Entry history
Integrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: March 1, 2001
Last modified: May 29, 2013
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Schizosaccharomyces pombe

Schizosaccharomyces pombe: entries and gene names

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents