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Protein

Uncharacterized protein PB1A10.02

Gene

SPAPB1A10.02

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Biological processi

  • CENP-A containing nucleosome assembly Source: PomBase
  • kinetochore assembly Source: PomBase
  • protein localization to chromosome, centromeric region Source: PomBase
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein PB1A10.02
Gene namesi
ORF Names:SPAPB1A10.02
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAPB1A10.02.
PomBaseiSPAPB1A10.02.

Subcellular locationi

GO - Cellular componenti

  • chromosome, centromeric region Source: PomBase
  • condensed nuclear chromosome, centromeric region Source: PomBase
  • cytosol Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 336336Uncharacterized protein PB1A10.02PRO_0000350767Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi279869. 11 interactions.
MINTiMINT-4702793.

Structurei

3D structure databases

ProteinModelPortaliQ9HDY7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiQ9HDY7.
OrthoDBiEOG73Z33C.

Family and domain databases

InterProiIPR018465. Scm3/HJURP.
[Graphical view]
PfamiPF10384. Scm3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9HDY7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCNRQPKAVD LPPNYSCPHL LSFQSVEFNT NPTACDDVFC KRIESEKKYN
60 70 80 90 100
DFLESLFKKY GRDTSDIADE VDLATGEIIV NNGHLEALKT KDDIWDPTFN
110 120 130 140 150
NLEISASNGY EKKLDSSIGN PGEKAVSPVH IEDFQSPQIY KFKNLSLRDE
160 170 180 190 200
MVSDCVFADE VPLASLFVEN VCNETIPSQS CVRLKINDKT RKVDASALEK
210 220 230 240 250
KSCLLPNSSG TLTDQRGLDT IKHKSIEQNE ILHVISDTLS SPRRRNPLLS
260 270 280 290 300
SPKTPLRRSF SKSKVRNSNS TKRRNFISLI SMISPRPNLS THHFNLGFQP
310 320 330
LSQQTSFSGS STQNPHSSST CKKAFCFQCI SESKKC
Length:336
Mass (Da):37,694
Last modified:March 1, 2001 - v1
Checksum:i6770C5C0AFEA4B5A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAC21475.1.
RefSeqiNP_593516.1. NM_001018950.2.

Genome annotation databases

EnsemblFungiiSPAPB1A10.02.1; SPAPB1A10.02.1:pep; SPAPB1A10.02.
GeneIDi2543449.
KEGGispo:SPAPB1A10.02.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAC21475.1.
RefSeqiNP_593516.1. NM_001018950.2.

3D structure databases

ProteinModelPortaliQ9HDY7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi279869. 11 interactions.
MINTiMINT-4702793.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAPB1A10.02.1; SPAPB1A10.02.1:pep; SPAPB1A10.02.
GeneIDi2543449.
KEGGispo:SPAPB1A10.02.

Organism-specific databases

EuPathDBiFungiDB:SPAPB1A10.02.
PomBaseiSPAPB1A10.02.

Phylogenomic databases

InParanoidiQ9HDY7.
OrthoDBiEOG73Z33C.

Miscellaneous databases

NextBioi20804462.
PROiQ9HDY7.

Family and domain databases

InterProiIPR018465. Scm3/HJURP.
[Graphical view]
PfamiPF10384. Scm3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYK12_SCHPO
AccessioniPrimary (citable) accession number: Q9HDY7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 23, 2008
Last sequence update: March 1, 2001
Last modified: February 17, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.