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Reviewed, UniProtKB/Swiss-Prot Q9HDX2 (YKN3_SCHPO)

Last modified June 16, 2009. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Uncharacterized lactate 2-monooxygenase PB1A11.03
    EC=1.13.12.4
Gene names
ORF Names: SPAPB1A11.03
OrganismSchizosaccharomyces pombe (Fission yeast) [Complete proteome]
Taxonomic identifier4896 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces

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Protein attributes

Sequence length407 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Catalytic activity

(S)-lactate + O2 = acetate + CO2 + H2O.

Cofactor

FMN By similarity.

Subcellular location

Cytoplasm. Nucleus. Ref.2

Sequence similarities

Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.

Contains 1 FMN hydroxy acid dehydrogenase domain.

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Ontologies

Keywords
   Cellular componentCytoplasm
Nucleus
   LigandFMN
Flavoprotein
   Molecular functionMonooxygenase
Oxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processoxidation reduction

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentcytosol Ref.2

Inferred from direct assay. Source: GeneDB_SPombe

nucleus Ref.2

Inferred from direct assay. Source: GeneDB_SPombe

   Molecular functionFMN binding

Inferred from electronic annotation. Source: InterPro

electron carrier activity

Inferred from electronic annotation. Source: InterPro

lactate 2-monooxygenase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 407407Uncharacterized lactate 2-monooxygenase PB1A11.03
PRO_0000316582

Regions

Domain28 – 406379FMN hydroxy acid dehydrogenase
Nucleotide binding332 – 35625FMN By similarity

Sites

Active site3011Proton acceptor By similarity
Binding site541Substrate Potential
Binding site1361FMN By similarity
Binding site1581FMN By similarity
Binding site1601Substrate By similarity
Binding site1881FMN By similarity
Binding site1971Substrate By similarity
Binding site2771FMN By similarity
Binding site3041Substrate Potential

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Sequences

Sequence LengthMass (Da)Tools
Q9HDX2-1 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: B0039309D1093CA4

FASTA40745,311
        10         20         30         40         50         60 
MFRNYNWFDA KEPISYESEI YAKGLKFQRP QITVDGRHWE QLAVERMTKD AAGYVYGCAG 

        70         80         90        100        110        120 
KRETYDKNME SFKKWSIIPN RLIKSGFPDL STTVFGQKYP FPIALAPVGV QKIFNPEGES 

       130        140        150        160        170        180 
GSCAAATREH IPYIISTASA TSFEDIEKAS GPGERWYQLY WPSNDHQDIT ISLLNRAKKT 

       190        200        210        220        230        240 
GCRVLIVTLD TFILGWRPSD MDNGYDPFLN PDSIGVEHGF SDPVFRKQFK EKHGVEVEEN 

       250        260        270        280        290        300 
MLEAAKEFAG IVFPGISHDW EDLKFLRKHW DGPIVLKGIM NVPDAKKAVE YGMQGIVVSN 

       310        320        330        340        350        360 
HGGRQQDGGV ASLTMLPKIV DAVGDKLDVL FDSGVRSGAD IAKALALGAK MVLIGRPYVY 

       370        380        390        400 
GLALEGSSGV SHVIRCLLGD LELTLHLSGI VSVKPKDLNR DVLYKEE

« Hide

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References

[1]"The genome sequence of Schizosaccharomyces pombe."
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. expand/collapse author list , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
Nature 415:871-880(2002) [PubMed: 11859360] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 38366 / 972.
[2]"ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
Nat. Biotechnol. 24:841-847(2006) [PubMed: 16823372] [Abstract]
Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

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Cross-references

Sequence databases

CU329670 Genomic DNA. Translation: CAC19728.1.
RefSeqNP_593999.1.

3D structure databases

HSSPHSSP built from PDB template 1GOX based on UniProtKB P05414.
ModBaseSearch...

Genome annotation databases

GeneID2543401.
KEGGspo:SPAPB1A11.03.
NMPDRfig|4896.1.peg.3969.

Organism-specific databases

GeneDB_SpombeSPAPB1A11.03.

Phylogenomic databases

OMAQ9HDX2. RQQDGGV.

Enzyme and pathway databases

BRENDA1.13.12.4. 653.

Gene expression databases

ArrayExpressQ9HDX2.

Family and domain databases

InterProIPR012133. a-Hydoxy_acid_DH_FMN.
IPR013785. Aldolase_TIM.
IPR000262. FMN-dep_DH.
IPR017934. FMN-dep_OHA_DH.
IPR008259. FMN_hydac_DH_AS.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PfamPF01070. FMN_dh. 1 hit.
[Graphical view]
PIRSFPIRSF000138. Al-hdrx_acd_dh. 1 hit.
PROSITEPS00557. FMN_HYDROXY_ACID_DH_1. 1 hit.
PS51349. FMN_HYDROXY_ACID_DH_2. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameYKN3_SCHPO
AccessionPrimary (citable) accession number: Q9HDX2
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: March 1, 2001
Last modified: June 16, 2009
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

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Relevant documents

Schizosaccharomyces pombe

Schizosaccharomyces pombe: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents