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Q9HD87

- CF050_HUMAN

UniProt

Q9HD87 - CF050_HUMAN

Protein

Putative uncharacterized protein C6orf50

Gene

C6orf50

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Protein uncertaini
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative uncharacterized protein C6orf50
    Alternative name(s):
    Nasopharyngeal carcinoma-associated gene 19 protein
    Gene namesi
    Name:C6orf50
    ORF Names:NAG19
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Unplaced

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 102102Putative uncharacterized protein C6orf50PRO_0000254056Add
    BLAST

    Proteomic databases

    PaxDbiQ9HD87.
    PRIDEiQ9HD87.

    Expressioni

    Gene expression databases

    BgeeiQ9HD87.
    CleanExiHS_C6orf50.
    GenevestigatoriQ9HD87.

    Organism-specific databases

    HPAiHPA044964.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9HD87.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei36 – 5520HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    HOGENOMiHOG000111555.
    InParanoidiQ9HD87.
    OMAiQLAFIAY.
    PhylomeDBiQ9HD87.

    Sequencei

    Sequence statusi: Complete.

    Q9HD87-1 [UniParc]FASTAAdd to Basket

    « Hide

    MANTQLDHLH YTTEFTRNDL LIICKKFNLM LMDEDIISLL AIFIKMCLWL    50
    WKQFLKRGSK CSETSELLEK VKLQLAFTAY KYVDICFPEQ MAYSRYIRWY 100
    IH 102
    Length:102
    Mass (Da):12,368
    Last modified:March 1, 2001 - v1
    Checksum:iC48C49B51508C584
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF210650 mRNA. Translation: AAF99586.1.
    AL138831 Genomic DNA. Translation: CAI20479.1.

    Polymorphism databases

    DMDMi74752819.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF210650 mRNA. Translation: AAF99586.1 .
    AL138831 Genomic DNA. Translation: CAI20479.1 .

    3D structure databases

    ProteinModelPortali Q9HD87.
    ModBasei Search...
    MobiDBi Search...

    Polymorphism databases

    DMDMi 74752819.

    Proteomic databases

    PaxDbi Q9HD87.
    PRIDEi Q9HD87.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    GeneCardsi GC06P003982.
    HPAi HPA044964.
    neXtProti NX_Q9HD87.

    Phylogenomic databases

    HOGENOMi HOG000111555.
    InParanoidi Q9HD87.
    OMAi QLAFIAY.
    PhylomeDBi Q9HD87.

    Gene expression databases

    Bgeei Q9HD87.
    CleanExi HS_C6orf50.
    Genevestigatori Q9HD87.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Analysis of novel genes on 7q32-ter."
      Zhang X.H., Bin L.-H., Yang J.B., Li G.Y.
      Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Tissue: Fetal brain.
    2. "The DNA sequence and analysis of human chromosome 6."
      Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D.
      , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.
      Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiCF050_HUMAN
    AccessioniPrimary (citable) accession number: Q9HD87
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 31, 2006
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    Product of a dubious CDS prediction.Curated
    Received originally the C6orf50 official gene symbol but the corresponding HGNC record was withdrawn.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 6
      Human chromosome 6: entries, gene names and cross-references to MIM

    External Data

    Dasty 3