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Q9HD87

- CF050_HUMAN

UniProt

Q9HD87 - CF050_HUMAN

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Protein
Putative uncharacterized protein C6orf50
Gene
C6orf50, NAG19
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5 - Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein C6orf50
Alternative name(s):
Nasopharyngeal carcinoma-associated gene 19 protein
Gene namesi
Name:C6orf50
ORF Names:NAG19
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Unplaced

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei36 – 5520Helical; Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 102102Putative uncharacterized protein C6orf50
PRO_0000254056Add
BLAST

Proteomic databases

PaxDbiQ9HD87.
PRIDEiQ9HD87.

Expressioni

Gene expression databases

BgeeiQ9HD87.
CleanExiHS_C6orf50.
GenevestigatoriQ9HD87.

Organism-specific databases

HPAiHPA044964.

Structurei

3D structure databases

ProteinModelPortaliQ9HD87.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000111555.
InParanoidiQ9HD87.
OMAiQLAFIAY.
PhylomeDBiQ9HD87.

Sequencei

Sequence statusi: Complete.

Q9HD87-1 [UniParc]FASTAAdd to Basket

« Hide

MANTQLDHLH YTTEFTRNDL LIICKKFNLM LMDEDIISLL AIFIKMCLWL    50
WKQFLKRGSK CSETSELLEK VKLQLAFTAY KYVDICFPEQ MAYSRYIRWY 100
IH 102
Length:102
Mass (Da):12,368
Last modified:March 1, 2001 - v1
Checksum:iC48C49B51508C584
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF210650 mRNA. Translation: AAF99586.1.
AL138831 Genomic DNA. Translation: CAI20479.1.

Polymorphism databases

DMDMi74752819.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF210650 mRNA. Translation: AAF99586.1 .
AL138831 Genomic DNA. Translation: CAI20479.1 .

3D structure databases

ProteinModelPortali Q9HD87.
ModBasei Search...
MobiDBi Search...

Polymorphism databases

DMDMi 74752819.

Proteomic databases

PaxDbi Q9HD87.
PRIDEi Q9HD87.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Organism-specific databases

GeneCardsi GC06P003982.
HPAi HPA044964.
neXtProti NX_Q9HD87.

Phylogenomic databases

HOGENOMi HOG000111555.
InParanoidi Q9HD87.
OMAi QLAFIAY.
PhylomeDBi Q9HD87.

Gene expression databases

Bgeei Q9HD87.
CleanExi HS_C6orf50.
Genevestigatori Q9HD87.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of novel genes on 7q32-ter."
    Zhang X.H., Bin L.-H., Yang J.B., Li G.Y.
    Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Fetal brain.
  2. "The DNA sequence and analysis of human chromosome 6."
    Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D.
    , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.
    Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiCF050_HUMAN
AccessioniPrimary (citable) accession number: Q9HD87
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: March 1, 2001
Last modified: July 9, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Product of a dubious CDS prediction.
Received originally the C6orf50 official gene symbol but the corresponding HGNC record was withdrawn.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 6
    Human chromosome 6: entries, gene names and cross-references to MIM

External Data

Dasty 3

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