Q9HCU4 (CELR2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 123.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Cadherin EGF LAG seven-pass G-type receptor 2 Alternative name(s): Cadherin family member 10 Epidermal growth factor-like protein 2 Short name=EGF-like protein 2 Flamingo homolog 3 Multiple epidermal growth factor-like domains protein 3 Short name=Multiple EGF-like domains protein 3 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 2923 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Receptor that may have an important role in cell/cell signaling during nervous system formation. |
| Subcellular location | |
| Tissue specificity | Highest expression in brain and testis. |
| Post-translational modification | The iron and 2-oxoglutarate dependent 3-hydroxylation of aspartate and asparagine is (R) stereospecific within EGF domains By similarity. |
| Sequence similarities | Belongs to the G-protein coupled receptor 2 family. LN-TM7 subfamily. Contains 9 cadherin domains. Contains 7 EGF-like domains. Contains 1 GPS domain. Contains 1 laminin EGF-like domain. Contains 2 laminin G-like domains. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 31 | 31 | Potential | ||||||||
| Chain | 32 – 2923 | 2892 | Cadherin EGF LAG seven-pass G-type receptor 2 | PRO_0000012916 | |||||||
Regions | |||||||||||
| Topological domain | 32 – 2380 | 2349 | Extracellular Potential | ||||||||
| Transmembrane | 2381 – 2401 | 21 | Helical; Name=1; Potential | ||||||||
| Topological domain | 2402 – 2416 | 15 | Cytoplasmic Potential | ||||||||
| Transmembrane | 2417 – 2437 | 21 | Helical; Name=2; Potential | ||||||||
| Topological domain | 2438 | 1 | Extracellular Potential | ||||||||
| Transmembrane | 2439 – 2459 | 21 | Helical; Name=3; Potential | ||||||||
| Topological domain | 2460 – 2480 | 21 | Cytoplasmic Potential | ||||||||
| Transmembrane | 2481 – 2501 | 21 | Helical; Name=4; Potential | ||||||||
| Topological domain | 2502 – 2519 | 18 | Extracellular Potential | ||||||||
| Transmembrane | 2520 – 2540 | 21 | Helical; Name=5; Potential | ||||||||
| Topological domain | 2541 – 2560 | 20 | Cytoplasmic Potential | ||||||||
| Transmembrane | 2561 – 2581 | 21 | Helical; Name=6; Potential | ||||||||
| Topological domain | 2582 – 2591 | 10 | Extracellular Potential | ||||||||
| Transmembrane | 2592 – 2612 | 21 | Helical; Name=7; Potential | ||||||||
| Topological domain | 2613 – 2923 | 311 | Cytoplasmic Potential | ||||||||
| Domain | 182 – 289 | 108 | Cadherin 1 | ||||||||
| Domain | 290 – 399 | 110 | Cadherin 2 | ||||||||
| Domain | 400 – 505 | 106 | Cadherin 3 | ||||||||
| Domain | 506 – 610 | 105 | Cadherin 4 | ||||||||
| Domain | 611 – 712 | 102 | Cadherin 5 | ||||||||
| Domain | 713 – 815 | 103 | Cadherin 6 | ||||||||
| Domain | 816 – 921 | 106 | Cadherin 7 | ||||||||
| Domain | 922 – 1023 | 102 | Cadherin 8 | ||||||||
| Domain | 1028 – 1146 | 119 | Cadherin 9 | ||||||||
| Domain | 1228 – 1286 | 59 | EGF-like 1; calcium-binding | ||||||||
| Domain | 1288 – 1324 | 37 | EGF-like 2; calcium-binding | ||||||||
| Domain | 1328 – 1366 | 39 | EGF-like 3; calcium-binding | ||||||||
| Domain | 1367 – 1571 | 205 | Laminin G-like 1 | ||||||||
| Domain | 1574 – 1610 | 37 | EGF-like 4; calcium-binding | ||||||||
| Domain | 1614 – 1791 | 178 | Laminin G-like 2 | ||||||||
| Domain | 1793 – 1828 | 36 | EGF-like 5; calcium-binding | ||||||||
| Domain | 1829 – 1867 | 39 | EGF-like 6; calcium-binding | ||||||||
| Domain | 1883 – 1922 | 40 | EGF-like 7; calcium-binding | ||||||||
| Domain | 1924 – 1971 | 48 | Laminin EGF-like | ||||||||
| Domain | 2316 – 2368 | 53 | GPS | ||||||||
| Compositional bias | 2743 – 2752 | 10 | Poly-Glu | ||||||||
Amino acid modifications | |||||||||||
| Modified residue | 1591 | 1 | (3R)-3-hydroxyasparagine Potential | ||||||||
| Modified residue | 1810 | 1 | (3R)-3-hydroxyasparagine Potential | ||||||||
| Glycosylation | 486 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 557 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 701 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1036 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1076 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1182 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1212 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1501 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1565 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1741 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1827 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1900 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2024 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2043 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2061 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2323 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2345 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 1232 ↔ 1243 | By similarity | |||||||||
| Disulfide bond | 1237 ↔ 1274 | By similarity | |||||||||
| Disulfide bond | 1276 ↔ 1285 | By similarity | |||||||||
| Disulfide bond | 1292 ↔ 1303 | By similarity | |||||||||
| Disulfide bond | 1297 ↔ 1312 | By similarity | |||||||||
| Disulfide bond | 1314 ↔ 1323 | By similarity | |||||||||
| Disulfide bond | 1332 ↔ 1343 | By similarity | |||||||||
| Disulfide bond | 1337 ↔ 1353 | By similarity | |||||||||
| Disulfide bond | 1355 ↔ 1365 | By similarity | |||||||||
| Disulfide bond | 1545 ↔ 1571 | By similarity | |||||||||
| Disulfide bond | 1578 ↔ 1589 | By similarity | |||||||||
| Disulfide bond | 1583 ↔ 1598 | By similarity | |||||||||
| Disulfide bond | 1600 ↔ 1609 | By similarity | |||||||||
| Disulfide bond | 1761 ↔ 1791 | By similarity | |||||||||
| Disulfide bond | 1797 ↔ 1808 | By similarity | |||||||||
| Disulfide bond | 1802 ↔ 1817 | By similarity | |||||||||
| Disulfide bond | 1819 ↔ 1828 | By similarity | |||||||||
| Disulfide bond | 1832 ↔ 1843 | By similarity | |||||||||
| Disulfide bond | 1837 ↔ 1855 | By similarity | |||||||||
| Disulfide bond | 1857 ↔ 1866 | By similarity | |||||||||
| Disulfide bond | 1887 ↔ 1899 | By similarity | |||||||||
| Disulfide bond | 1889 ↔ 1906 | By similarity | |||||||||
| Disulfide bond | 1908 ↔ 1921 | By similarity | |||||||||
| Disulfide bond | 1924 ↔ 1936 | By similarity | |||||||||
| Disulfide bond | 1926 ↔ 1943 | By similarity | |||||||||
| Disulfide bond | 1945 ↔ 1954 | By similarity | |||||||||
| Disulfide bond | 1957 ↔ 1969 | By similarity | |||||||||
Natural variations | |||||||||||
| Natural variant | 1066 | 1 | R → Q. Corresponds to variant rs12083590 [ dbSNP | Ensembl ]. | VAR_049474 | |||||||
| Natural variant | 1639 | 1 | Y → H. Ref.4 Corresponds to variant rs653635 [ dbSNP | Ensembl ]. | VAR_024481 | |||||||
| Natural variant | 1992 | 1 | G → R. Corresponds to variant rs12567377 [ dbSNP | Ensembl ]. | VAR_049475 | |||||||
| Natural variant | 2387 | 1 | T → A. Corresponds to variant rs17035649 [ dbSNP | Ensembl ]. | VAR_049476 | |||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The human homologue of flamingo, EGFL2, encodes a brain-expressed large cadherin-like protein with epidermal growth factor-like domains, and maps to chromosome 1p13.3-p21.1." Vincent J.B., Skaug J., Scherer S.W. DNA Res. 7:233-235(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "Genome-wide discovery and analysis of human seven transmembrane helix receptor genes." Suwa M., Sato T., Okouchi I., Arita M., Futami K., Matsumoto S., Tsutsumi S., Aburatani H., Asai K., Akiyama Y. Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [3] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "Prediction of the coding sequences of unidentified human genes. VI. The coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain." Nagase T., Seki N., Ishikawa K., Ohira M., Kawarabayasi Y., Ohara O., Tanaka A., Kotani H., Miyajima N., Nomura N. DNA Res. 3:321-329(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 70-2923, VARIANT HIS-1639. Tissue: Brain. |
| [5] | Ohara O., Nagase T., Kikuno R., Nomura N. Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases Cited for: SEQUENCE REVISION. |
| [6] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF234887 mRNA. Translation: AAG00080.1. AB065955 Genomic DNA. Translation: BAC06168.1. AL390252 Genomic DNA. Translation: CAI13170.1. D87469 mRNA. Translation: BAA13407.2. |
| IPI | IPI00015346. |
| RefSeq | NP_001399.1. NM_001408.2. |
| UniGene | Hs.57652. |
3D structure databases | |
| ProteinModelPortal | Q9HCU4. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9HCU4. 6 interactions. |
| MINT | MINT-1395407. |
| STRING | 9606.ENSP00000271332. |
Protein family/group databases | |
| MEROPS | I63.002. |
| GPCRDB | Search... |
PTM databases | |
| PhosphoSite | Q9HCU4. |
Polymorphism databases | |
| DMDM | 22095550. |
Proteomic databases | |
| PaxDb | Q9HCU4. |
| PRIDE | Q9HCU4. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000271332; ENSP00000271332; ENSG00000143126. |
| GeneID | 1952. |
| KEGG | hsa:1952. |
| UCSC | uc001dxa.4. human. |
Organism-specific databases | |
| CTD | 1952. |
| GeneCards | GC01P109792. |
| HGNC | HGNC:3231. CELSR2. |
| HPA | HPA013952. |
| MIM | 604265. gene. |
| neXtProt | NX_Q9HCU4. |
| PharmGKB | PA26394. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG12793. |
| HOGENOM | HOG000231346. |
| HOVERGEN | HBG050887. |
| InParanoid | Q9HCU4. |
| KO | K04601. |
| OMA | YILRAYA. |
| OrthoDB | EOG4KKZ23. |
Enzyme and pathway databases | |
| SignaLink | Q9HCU4. |
Gene expression databases | |
| Bgee | Q9HCU4. |
| CleanEx | HS_CELSR2. |
| Genevestigator | Q9HCU4. |
| GermOnline | ENSG00000143126. Homo sapiens. |
Family and domain databases | |
| Gene3D | 2.60.120.200. 2 hits. 2.60.40.60. 9 hits. |
| InterPro | IPR002126. Cadherin. IPR015919. Cadherin-like. IPR020894. Cadherin_CS. IPR008985. ConA-like_lec_gl_sf. IPR013320. ConA-like_subgrp. IPR022624. DUF3497. IPR000742. EG-like_dom. IPR001881. EGF-like_Ca-bd. IPR013032. EGF-like_CS. IPR000152. EGF-type_Asp/Asn_hydroxyl_site. IPR002049. EGF_laminin. IPR017981. GPCR_2-like. IPR001879. GPCR_2_extracellular_dom. IPR000832. GPCR_2_secretin-like. IPR000203. GPS_dom. IPR001791. Laminin_G. IPR001368. TNFR/NGFR_Cys_rich_reg. [Graphical view] |
| Pfam | PF00002. 7tm_2. 1 hit. PF00028. Cadherin. 8 hits. PF12003. DUF3497. 1 hit. PF00008. EGF. 1 hit. PF01825. GPS. 1 hit. PF00053. Laminin_EGF. 1 hit. PF02210. Laminin_G_2. 2 hits. [Graphical view] |
| PRINTS | PR00205. CADHERIN. PR00249. GPCRSECRETIN. |
| SMART | SM00112. CA. 9 hits. SM00181. EGF. 5 hits. SM00179. EGF_CA. 1 hit. SM00180. EGF_Lam. 1 hit. SM00303. GPS. 1 hit. SM00008. HormR. 1 hit. SM00282. LamG. 2 hits. SM00208. TNFR. 1 hit. [Graphical view] |
| SUPFAM | SSF49313. Cadherin. 9 hits. SSF49899. ConA_like_lec_gl. 2 hits. |
| PROSITE | PS00010. ASX_HYDROXYL. 2 hits. PS00232. CADHERIN_1. 7 hits. PS50268. CADHERIN_2. 9 hits. PS00022. EGF_1. 6 hits. PS01186. EGF_2. 4 hits. PS50026. EGF_3. 6 hits. PS01248. EGF_LAM_1. 1 hit. PS50027. EGF_LAM_2. 2 hits. PS00649. G_PROTEIN_RECEP_F2_1. False negative. PS00650. G_PROTEIN_RECEP_F2_2. False negative. PS50227. G_PROTEIN_RECEP_F2_3. 1 hit. PS50261. G_PROTEIN_RECEP_F2_4. 1 hit. PS50221. GPS. 1 hit. PS50025. LAM_G_DOMAIN. 2 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | CELSR2. human. |
| GenomeRNAi | 1952. |
| NextBio | 7911. |
| SOURCE | Search... |
Entry information
| Entry name | CELR2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9HCU4 Secondary accession number(s): Q5T2Y7, Q92566 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| 7-transmembrane G-linked receptors List of 7-transmembrane G-linked receptor entries |
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
