Q9HCM4 (E41L5_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 96.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Band 4.1-like protein 5 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 733 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May contribute to the correct positioning of tight junctions during the establishment of polarity in epithelial cells. Ref.5 |
| Subunit structure | Interacts with MPP5, CRB2 and CRB3. Ref.5 |
| Subcellular location | Cytoplasm. Cell junction › adherens junction. Note: Associated with the plasma membrane. Colocalizes with CTNNB1, an adherens junction marker By similarity. |
| Domain | The FERM domain binds to CRB1. |
| Sequence similarities | Contains 1 FERM domain. |
Ontologies
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9HCM4-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9HCM4-2) The sequence of this isoform differs from the canonical sequence as follows: 446-505: CIPLNIDLLN...EVEYETLKDT → WLSAASDCCQ...FPGHTAMTEI 506-733: Missing. | ||||||
| Isoform 3 (identifier: Q9HCM4-3) The sequence of this isoform differs from the canonical sequence as follows: 668-669: PQ → P | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 4 (identifier: Q9HCM4-4) The sequence of this isoform differs from the canonical sequence as follows: 669-687: QSGAMSNGLAGCEMLLTGK → LWSHFGRRSCPEAEVFTDH 688-733: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 733 | 733 | Band 4.1-like protein 5 | PRO_0000219406 | |||||
Regions | |||||||||
| Domain | 43 – 327 | 285 | FERM | ||||||
Amino acid modifications | |||||||||
| Modified residue | 436 | 1 | Phosphoserine Ref.7 | ||||||
Natural variations | |||||||||
| Alternative sequence | 446 – 505 | 60 | CIPLN…TLKDT → WLSAASDCCQRGGNQWNTRA LPPPQTAHRNYTDFVHEHNV KNAGIRHDVHFPGHTAMTEI in isoform 2. | VSP_033034 | |||||
| Alternative sequence | 506 – 733 | 228 | Missing in isoform 2. | VSP_033035 | |||||
| Alternative sequence | 668 – 669 | 2 | PQ → P in isoform 3. | VSP_033036 | |||||
| Alternative sequence | 669 – 687 | 19 | QSGAM…LLTGK → LWSHFGRRSCPEAEVFTDH in isoform 4. | VSP_033037 | |||||
| Alternative sequence | 688 – 733 | 46 | Missing in isoform 4. | VSP_033038 | |||||
| Natural variant | 334 | 1 | H → Y. Corresponds to variant rs28930677 [ dbSNP | Ensembl ]. | VAR_048357 | |||||
| Natural variant | 462 | 1 | A → T. Ref.1 Ref.4 Corresponds to variant rs1034489 [ dbSNP | Ensembl ]. | VAR_042699 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 2 AND 4), VARIANT THR-462. |
| [2] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2). Tissue: Retinoblastoma and Testis. |
| [4] | "Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Nakayama M., Hirosawa M., Ohara O. DNA Res. 7:273-281(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 188-732 (ISOFORM 3), VARIANT THR-462. Tissue: Brain. |
| [5] | "FERM protein EPB41L5 is a novel member of the mammalian CRB-MPP5 polarity complex." Gosens I., Sessa A., den Hollander A.I., Letteboer S.J.F., Belloni V., Arends M.L., Le Bivic A., Cremers F.P.M., Broccoli V., Roepman R. Exp. Cell Res. 313:3959-3970(2007) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH MPP5; CRB2 AND CRB3. |
| [6] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [7] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-436, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [8] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AK023019 mRNA. Translation: BAB14360.1. AK290895 mRNA. Translation: BAF83584.1. CH471103 Genomic DNA. Translation: EAW95234.1. BC032822 mRNA. Translation: AAH32822.1. BC054508 mRNA. Translation: AAH54508.1. AB046768 mRNA. Translation: BAB13374.1. |
| IPI | IPI00217841. IPI00376221. IPI00890719. IPI00890731. |
| RefSeq | NP_001171866.1. NM_001184937.1. NP_001171867.1. NM_001184938.1. NP_001171868.1. NM_001184939.1. NP_065960.2. NM_020909.3. |
| UniGene | Hs.369232. |
3D structure databases | |
| ProteinModelPortal | Q9HCM4. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9HCM4. 4 interactions. |
| STRING | 9606.ENSP00000263713. |
PTM databases | |
| PhosphoSite | Q9HCM4. |
Polymorphism databases | |
| DMDM | 187608883. |
Proteomic databases | |
| PaxDb | Q9HCM4. |
| PRIDE | Q9HCM4. |
Protocols and materials databases | |
| DNASU | 57669. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000263713; ENSP00000263713; ENSG00000115109. ENST00000331393; ENSP00000329687; ENSG00000115109. ENST00000443124; ENSP00000393722; ENSG00000115109. ENST00000443902; ENSP00000393856; ENSG00000115109. ENST00000452780; ENSP00000390439; ENSG00000115109. |
| GeneID | 57669. |
| KEGG | hsa:57669. |
| UCSC | uc002tmg.3. human. uc002tmh.4. human. uc010fll.3. human. uc010flm.3. human. |
Organism-specific databases | |
| CTD | 57669. |
| GeneCards | GC02P120865. |
| HGNC | HGNC:19819. EPB41L5. |
| HPA | HPA037563. |
| MIM | 611730. gene. |
| neXtProt | NX_Q9HCM4. |
| PharmGKB | PA134862834. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG269561. |
| HOGENOM | HOG000231632. |
| HOVERGEN | HBG051434. |
| InParanoid | Q9HCM4. |
| OMA | FVHEHNV. |
| OrthoDB | EOG45QHCQ. |
| PhylomeDB | Q9HCM4. |
Gene expression databases | |
| ArrayExpress | Q9HCM4. |
| Bgee | Q9HCM4. |
| CleanEx | HS_EPB41L5. |
| Genevestigator | Q9HCM4. |
| GermOnline | ENSG00000115109. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.20.80.10. 1 hit. 2.30.29.30. 1 hit. |
| InterPro | IPR019749. Band_41_domain. IPR019750. Band_41_fam. IPR000798. Ez/rad/moesin_like. IPR014847. FERM-adjacent. IPR014352. FERM/acyl-CoA-bd_prot_3-hlx. IPR019748. FERM_central. IPR019747. FERM_CS. IPR000299. FERM_domain. IPR018979. FERM_N. IPR018980. FERM_PH-like_C. IPR011993. PH_like_dom. [Graphical view] |
| Pfam | PF08736. FA. 1 hit. PF09380. FERM_C. 1 hit. PF00373. FERM_M. 1 hit. PF09379. FERM_N. 1 hit. [Graphical view] |
| PRINTS | PR00935. BAND41. PR00661. ERMFAMILY. |
| SMART | SM00295. B41. 1 hit. [Graphical view] |
| SUPFAM | SSF47031. FERM_3-hlx. 1 hit. |
| PROSITE | PS00660. FERM_1. 1 hit. PS00661. FERM_2. 1 hit. PS50057. FERM_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | EPB41L5. human. |
| GenomeRNAi | 57669. |
| NextBio | 64455. |
| SOURCE | Search... |
Entry information
| Entry name | E41L5_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9HCM4 Secondary accession number(s): Q7Z5S1, Q8IZ12, Q9H975 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 2 Human chromosome 2: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
