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Q9HCJ5 (ZSWM6_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 79. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Zinc finger SWIM domain-containing protein 6
Gene names
Name:ZSWIM6
Synonyms:KIAA1577
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1215 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 SWIM-type zinc finger.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12151215Zinc finger SWIM domain-containing protein 6
PRO_0000223105

Regions

Zinc finger246 – 28338SWIM-type
Compositional bias19 – 154136Gly-rich
Compositional bias155 – 1584Poly-Ser
Compositional bias160 – 19738Ala-rich

Sequences

Sequence LengthMass (Da)Tools
Q9HCJ5 [UniParc].

Last modified May 5, 2009. Version 2.
Checksum: 828B5AA0644EECE0

FASTA1,215133,470
        10         20         30         40         50         60 
MAERGQQPPP AKRLCCRPGG GGGGGGSSGG GGGAGGGYSS ACRPGPRAGG AAAAAACGGG 

        70         80         90        100        110        120 
AALGLLPPGK TQSPESLLDI AARRVAEKWP FQRVEERFER IPEPVQRRIV YWSFPRSERE 

       130        140        150        160        170        180 
ICMYSSFNTG GGAAGGPGDD SGGGGGAGGG GGGGSSSSPA ATSAAATSAA AAAAAAAAAA 

       190        200        210        220        230        240 
AAAAGAGAPS VGAAGAADGG DETRLPFRRG IALLESGCVD NVLQVGFHLS GTVTEPAIQS 

       250        260        270        280        290        300 
EPETVCNVAI SFDRCKITSV TCSCGNKDIF YCAHVVALSL YRIRKPDQVK LHLPISETLF 

       310        320        330        340        350        360 
QMNRDQLQKF VQYLITVHHT EVLPTAQKLA DEILSQNSEI NQVHGAPDPT AGASIDDENC 

       370        380        390        400        410        420 
WHLDEEQVQE QVKLFLSQGG YHGSGKQLNL LFAKVREMLK MRDSNGARML TLITEQFMAD 

       430        440        450        460        470        480 
PRLSLWRQQG TAMTDKYRQL WDELGALWMC IVLNPHCKLE QKASWLKQLK KWNSVDVCPW 

       490        500        510        520        530        540 
EDGNHGSELP NLTNALPQGA NANQDSSNRP HRTVFTRAIE ACDLHWQDSH LQHIISSDLY 

       550        560        570        580        590        600 
TNYCYHDDTE NSLFDSRGWP LWHEHVPTAC ARVDALRSHG YPREALRLAI AIVNTLRRQQ 

       610        620        630        640        650        660 
QKQLEMFRTQ KKELPHKNIT SITNLEGWVG HPLDPVGTLF SSLMEACRID DENLSGFSDF 

       670        680        690        700        710        720 
TENMGQCKSL EYQHLPAHKF LEEGESYLTL AVEVALIGLG QQRIMPDGLY TQEKVCRNEE 

       730        740        750        760        770        780 
QLISKLQEIE LDDTLVKIFR KQAVFLLEAG PYSGLGEIIH RESVPMHTFA KYLFTSLLPH 

       790        800        810        820        830        840 
DAELAYKIAL RAMRLLVLES TAPSGDLTRP HHIASVVPNR YPRWFTLSHI ESQQCELAST 

       850        860        870        880        890        900 
MLTAAKGDVR RLETVLESIQ KNIHSSSHIF KLAQDAFKIA TLMDSLPDIT LLKVSLELGL 

       910        920        930        940        950        960 
QVMRMTLSTL NWRRREMVRW LVTCATEVGV YALDSIMQTW FTLFTPTEAT SIVATTVMSN 

       970        980        990       1000       1010       1020 
STIVRLHLDC HQQEKLASSA RTLALQCAMK DPQNCALSAL TLCEKDHIAF ETAYQIVLDA 

      1030       1040       1050       1060       1070       1080 
ATTGMSYTQL FTIARYMEHR GYPMRAYKLA TLAMTHLNLS YNQDTHPAIN DVLWACALSH 

      1090       1100       1110       1120       1130       1140 
SLGKNELAAI IPLVVKSVKC ATVLSDILRR CTLTTPGMVG LHGRRNSGKL MSLDKAPLRQ 

      1150       1160       1170       1180       1190       1200 
LLDATIGAYI NTTHSRLTHI SPRHYSEFIE FLSKARETFL MAHDGHIQFT QFIDNLKQIY 

      1210 
KGKKKLMMLV RERFG 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC122718 Genomic DNA. No translation available.
AC008836 Genomic DNA. No translation available.
AB046797 mRNA. Translation: BAB13403.1.
CCDSCCDS47215.1.
RefSeqNP_065979.1. NM_020928.1.
UniGeneHs.744939.

3D structure databases

ProteinModelPortalQ9HCJ5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid121714. 1 interaction.

PTM databases

PhosphoSiteQ9HCJ5.

Polymorphism databases

DMDM229462808.

Proteomic databases

MaxQBQ9HCJ5.
PaxDbQ9HCJ5.
PRIDEQ9HCJ5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000252744; ENSP00000252744; ENSG00000130449.
GeneID57688.
KEGGhsa:57688.
UCSCuc003jsr.3. human.

Organism-specific databases

CTD57688.
GeneCardsGC05P060628.
H-InvDBHIX0004892.
HGNCHGNC:29316. ZSWIM6.
HPAHPA035938.
neXtProtNX_Q9HCJ5.
PharmGKBPA134910181.
HUGESearch...
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG322060.
HOGENOMHOG000231419.
HOVERGENHBG058098.
InParanoidQ9HCJ5.
OMAEQKSSWL.
OrthoDBEOG74J970.
PhylomeDBQ9HCJ5.
TreeFamTF324881.

Gene expression databases

BgeeQ9HCJ5.
CleanExHS_ZSWIM6.
GenevestigatorQ9HCJ5.

Family and domain databases

InterProIPR007527. Znf_SWIM.
[Graphical view]
PROSITEPS50966. ZF_SWIM. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSZSWIM6. human.
GenomeRNAi57688.
NextBio64517.
PROQ9HCJ5.

Entry information

Entry nameZSWM6_HUMAN
AccessionPrimary (citable) accession number: Q9HCJ5
Entry history
Integrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: May 5, 2009
Last modified: July 9, 2014
This is version 79 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

SIMILARITY comments

Index of protein domains and families

Human chromosome 5

Human chromosome 5: entries, gene names and cross-references to MIM