Reviewed,
UniProtKB/Swiss-Prot Q9HCJ1 (ANKH_HUMAN)
Last modified
November 24, 2009.
Version 76.
History...
Clusters with 100%,
90%,
50% identity |
Documents (5) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Progressive ankylosis protein homolog Short name=ANK | ||||||
| Gene names |
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| Organism | Homo sapiens (Human) [Complete proteome] | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 492 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Regulates intra- and extracellular levels of inorganic pyrophosphate (PPi), probably functioning as PPi transporter. |
| Subcellular location | Membrane; Multi-pass membrane protein Probable. |
| Tissue specificity | Found in osteoblasts from mandibular bone and from iliac bone; not detected in osteoclastic cells. |
| Involvement in disease | Defects in ANKH are the cause of chondrocalcinosis 2 (CCAL2) [MIM:118600]. Chondrocalcinosis is a common cause of joint pain and arthritis caused by calcium deposition in articular cartilage and the presence of calcium hypophosphate crystals in synovial fluid, cartilage and periarticular soft tissue. CCAL2 inheritance is autosomal dominant. Ref.9 Ref.10 Ref.11 Defects in ANKH are the cause of craniometaphyseal dysplasia Jackson type (CMDJ) [MIM:123000]. CMDJ is a rare autosomal dominant skeletal disorder characterized by abnormal bone formation and mineralization in membranous as well as endochondral bones. Progressive thickening of the bones can cause narrowing of cranial foramina and can lead to severe visual and neurological impairment, such as facial palsy and deafness. Ref.7 Ref.8 |
| Sequence similarities | Belongs to the ANKH family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Phosphate transport Transport |
| Cellular component | Membrane |
| Disease | Deafness Disease mutation |
| Domain | Transmembrane |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | locomotory behavior Ref.1 Non-traceable author statement. Source: UniProtKB phosphate transportInferred from electronic annotation. Source: UniProtKB-KW regulation of bone mineralization Ref.1 Ref.8Traceable author statement. Source: UniProtKB skeletal system development Ref.1Non-traceable author statement. Source: UniProtKB |
| Cellular component | outer membrane Ref.1 Ref.8 Traceable author statement. Source: UniProtKB |
| Molecular function | inorganic diphosphate transmembrane transporter activity Ref.8 Inferred from direct assay. Source: UniProtKB inorganic phosphate transmembrane transporter activity Ref.8Inferred from direct assay. Source: UniProtKB |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 492 | 492 | Progressive ankylosis protein homolog | PRO_0000137467 | |||||
Regions | |||||||||
| Topological domain | 1 – 85 | 85 | Cytoplasmic Potential | ||||||
| Transmembrane | 86 – 106 | 21 | Potential | ||||||
| Topological domain | 107 – 131 | 25 | Extracellular Potential | ||||||
| Transmembrane | 132 – 152 | 21 | Potential | ||||||
| Topological domain | 153 – 158 | 6 | Cytoplasmic Potential | ||||||
| Transmembrane | 159 – 179 | 21 | Potential | ||||||
| Topological domain | 180 – 189 | 10 | Extracellular Potential | ||||||
| Transmembrane | 190 – 210 | 21 | Potential | ||||||
| Topological domain | 211 – 326 | 116 | Cytoplasmic Potential | ||||||
| Transmembrane | 327 – 347 | 21 | Potential | ||||||
| Topological domain | 348 – 350 | 3 | Extracellular Potential | ||||||
| Transmembrane | 351 – 371 | 21 | Potential | ||||||
| Topological domain | 372 – 403 | 32 | Cytoplasmic Potential | ||||||
| Transmembrane | 404 – 426 | 23 | Potential | ||||||
| Topological domain | 427 – 429 | 3 | Extracellular Potential | ||||||
| Transmembrane | 430 – 452 | 23 | Potential | ||||||
| Topological domain | 453 – 492 | 40 | Cytoplasmic Potential | ||||||
Natural variations | |||||||||
| Natural variant | 5 | 1 | P → L in CCAL2. Ref.10 | VAR_022606 | |||||
| Natural variant | 5 | 1 | P → T in CCAL2. Ref.11 | VAR_022607 | |||||
| Natural variant | 48 | 1 | M → T in CCAL2. Ref.9 | VAR_017556 | |||||
| Natural variant | 292 | 1 | W → R in CMDJ. Ref.8 | VAR_012192 | |||||
| Natural variant | 331 | 1 | C → R in CMDJ. Ref.8 | VAR_012193 | |||||
| Natural variant | 375 | 1 | Missing in CMDJ. | VAR_012194 | |||||
| Natural variant | 376 | 1 | Missing in CMDJ. | VAR_012195 | |||||
| Natural variant | 377 | 1 | Missing in CMDJ. | VAR_012196 | |||||
| Natural variant | 380 | 1 | P → PA in CMDJ. Ref.7 Ref.8 | VAR_012197 | |||||
| Natural variant | 389 | 1 | G → R in CMDJ. dbSNP rs28939080. | VAR_012198 | |||||
| Natural variant | 490 | 1 | Missing in CCAL2; sporadic. | VAR_017557 | |||||
Experimental info | |||||||||
| Sequence conflict | 78 | 1 | N → S in AAF88039. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Role of the mouse ank gene in control of tissue calcification and arthritis." Ho A.M., Johnson M.D., Kingsley D.M. Science 289:265-270(2000) [PubMed: 10894769] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Nakayama M., Hirosawa M., Ohara O. DNA Res. 7:273-281(2000) [PubMed: 10997877] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain. |
| [3] | "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment." Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J., Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P., Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E. Gray A.M.Genome Res. 13:2265-2270(2003) [PubMed: 12975309] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Cerebellum. |
| [5] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Ovary. |
| [7] | "Autosomal dominant craniometaphyseal dysplasia is caused by mutations in the transmembrane protein ANK." Reichenberger E., Tiziani V., Watanabe S., Park L., Ueki Y., Santanna C., Baur S.T., Shiang R., Grange D.K., Beighton P., Gardner J., Hamersma H., Sellars S., Ramesar R., Lidral A.C., Sommer A., Raposo do Amaral C.M., Gorlin R.J., Mulliken J.B., Olsen B.R. Am. J. Hum. Genet. 68:1321-1326(2001) [PubMed: 11326338] [Abstract] Cited for: VARIANTS CMDJ SER-375 DEL; PHE-376 DEL AND ALA-380 INS. |
| [8] | "Heterozygous mutations in ANKH, the human ortholog of the mouse progressive ankylosis gene, result in craniometaphyseal dysplasia." Nuernberg P., Thiele H., Chandler D., Hoehne W., Cunningham M.L., Ritter H., Leschik G., Uhlmann K., Mischung C., Harrop K., Goldblatt J., Borochowitz Z.U., Kotzot D., Westermann F., Mundlos S., Braun H.-S., Laing N., Tinschert S. Nat. Genet. 28:37-41(2001) [PubMed: 11326272] [Abstract] Cited for: VARIANTS CMDJ ARG-292; ARG-331; SER-375 DEL; PHE-377 DEL; ALA-380 INS AND ARG-389. |
| [9] | "Mutations in ANKH cause chondrocalcinosis." Pendleton A., Johnson M.D., Hughes A., Gurley K.A., Ho A.M., Doherty M., Dixey J., Gillet P., Loeuille D., McGrath R., Reginato A., Shiang R., Wright G., Netter P., Williams C., Kingsley D.M. Am. J. Hum. Genet. 71:933-940(2002) [PubMed: 12297987] [Abstract] Cited for: VARIANTS CCAL2 THR-48 AND GLU-490 DEL. |
| [10] | "Autosomal dominant familial calcium pyrophosphate dihydrate deposition disease is caused by mutation in the transmembrane protein ANKH." Williams C.J., Zhang Y., Timms A., Bonavita G., Caeiro F., Broxholme J., Cuthbertson J., Jones Y., Marchegiani R., Reginato A., Russell R.G.G., Wordsworth B.P., Carr A.J., Brown M.A. Am. J. Hum. Genet. 71:985-991(2002) [PubMed: 12297989] [Abstract] Cited for: VARIANT CCAL2 LEU-5. |
| [11] | "Mutations in the amino terminus of ANKH in two US families with calcium pyrophosphate dihydrate crystal deposition disease." Williams C.J., Pendleton A., Bonavita G., Reginato A.J., Hughes A.E., Peariso S., Doherty M., McCarty D.J., Ryan L.M. Arthritis Rheum. 48:2627-2631(2003) [PubMed: 13130483] [Abstract] Cited for: VARIANT CCAL2 THR-5. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AF274753 mRNA. Translation: AAF88039.1. AB046801 mRNA. Translation: BAB13407.1. Different initiation. AY358503 mRNA. Translation: AAQ88867.1. AK315012 mRNA. Translation: BAG37504.1. CH471102 Genomic DNA. Translation: EAX08034.1. BC009835 mRNA. Translation: AAH09835.1. BC014526 mRNA. Translation: AAH14526.1. | |
| IPI | IPI00215869. |
| RefSeq | NP_473368.1. |
| UniGene | Hs.156727 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q9HCJ1. |
Protein family/group databases | |
| TCDB | 2.A.66.9.1. multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) flippase superfamily. |
PTM databases | |
| PhosphoSite | Q9HCJ1. |
Proteomic databases | |
| PRIDE | Q9HCJ1. |
Genome annotation databases | |
| Ensembl | ENST00000284268; ENSP00000284268; ENSG00000154122; Homo sapiens. [Genome view] |
| GeneID | 56172. |
| KEGG | hsa:56172. |
| UCSC | uc003jfm.2. human. |
Organism-specific databases | |
| CTD | 56172. |
| GeneCards | GC05M014762. |
| H-InvDB | HIX0004761. HIX0024805. |
| HGNC | HGNC:15492. ANKH. |
| MIM | 118600. phenotype. 123000. phenotype. 605145. gene. |
| Orphanet | 1416. Chondrocalcinosis, familial articular. 1522. Craniometaphyseal dysplasia. |
| PharmGKB | PA24801. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | Q9HCJ1. |
| HOVERGEN | Q9HCJ1. |
| OMA | YMGVHGA |
| OrthoDB | EOG9JDKS4 |
Gene expression databases | |
| ArrayExpress | Q9HCJ1. |
| Bgee | Q9HCJ1. |
| CleanEx | HS_ANKH. |
| Genevestigator | Q9HCJ1. |
| GermOnline | ENSG00000154122. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR009887. ANKH. [Graphical view] |
| Pfam | PF07260. ANKH. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 61818. |
| SOURCE | Search... |
Entry information
| Entry name | ANKH_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9HCJ1 Secondary accession number(s): B2RCA7, Q9NQW2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 5 Human chromosome 5: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


