Q9HCJ1 (ANKH_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 105.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Progressive ankylosis protein homolog Short name=ANK | ||||||
| Gene names |
| ||||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 492 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Regulates intra- and extracellular levels of inorganic pyrophosphate (PPi), probably functioning as PPi transporter. |
| Subcellular location | Membrane; Multi-pass membrane protein Probable. |
| Tissue specificity | Found in osteoblasts from mandibular bone and from iliac bone; not detected in osteoclastic cells. |
| Involvement in disease | Chondrocalcinosis 2 (CCAL2) [MIM:118600]: Chondrocalcinosis is a common cause of joint pain and arthritis caused by calcium deposition in articular cartilage and the presence of calcium hypophosphate crystals in synovial fluid, cartilage and periarticular soft tissue.DEAL2 inheritance is autosomal dominant. Craniometaphyseal dysplasia Jackson type (CMDJ) [MIM:123000]: Rare autosomal dominant skeletal disorder characterized by abnormal bone formation and mineralization in membranous as well as endochondral bones. Progressive thickening of the bones can cause narrowing of cranial foramina and can lead to severe visual and neurological impairment, such as facial palsy and deafness. |
| Sequence similarities | Belongs to the ANKH family. |
| Sequence caution | The sequence BAB13407.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 492 | 492 | Progressive ankylosis protein homolog | PRO_0000137467 | |||||
Regions | |||||||||
| Topological domain | 1 – 85 | 85 | Cytoplasmic Potential | ||||||
| Transmembrane | 86 – 106 | 21 | Helical; Potential | ||||||
| Topological domain | 107 – 131 | 25 | Extracellular Potential | ||||||
| Transmembrane | 132 – 152 | 21 | Helical; Potential | ||||||
| Topological domain | 153 – 158 | 6 | Cytoplasmic Potential | ||||||
| Transmembrane | 159 – 179 | 21 | Helical; Potential | ||||||
| Topological domain | 180 – 189 | 10 | Extracellular Potential | ||||||
| Transmembrane | 190 – 210 | 21 | Helical; Potential | ||||||
| Topological domain | 211 – 326 | 116 | Cytoplasmic Potential | ||||||
| Transmembrane | 327 – 347 | 21 | Helical; Potential | ||||||
| Topological domain | 348 – 350 | 3 | Extracellular Potential | ||||||
| Transmembrane | 351 – 371 | 21 | Helical; Potential | ||||||
| Topological domain | 372 – 403 | 32 | Cytoplasmic Potential | ||||||
| Transmembrane | 404 – 426 | 23 | Helical; Potential | ||||||
| Topological domain | 427 – 429 | 3 | Extracellular Potential | ||||||
| Transmembrane | 430 – 452 | 23 | Helical; Potential | ||||||
| Topological domain | 453 – 492 | 40 | Cytoplasmic Potential | ||||||
Natural variations | |||||||||
| Natural variant | 5 | 1 | P → L in CCAL2. Ref.10 | VAR_022606 | |||||
| Natural variant | 5 | 1 | P → T in CCAL2. Ref.11 | VAR_022607 | |||||
| Natural variant | 48 | 1 | M → T in CCAL2. Ref.9 | VAR_017556 | |||||
| Natural variant | 292 | 1 | W → R in CMDJ. Ref.8 | VAR_012192 | |||||
| Natural variant | 331 | 1 | C → R in CMDJ. Ref.8 | VAR_012193 | |||||
| Natural variant | 375 | 1 | Missing in CMDJ. Ref.7 Ref.8 | VAR_012194 | |||||
| Natural variant | 376 | 1 | Missing in CMDJ. Ref.7 | VAR_012195 | |||||
| Natural variant | 377 | 1 | Missing in CMDJ. Ref.8 | VAR_012196 | |||||
| Natural variant | 380 | 1 | P → PA in CMDJ. Ref.7 Ref.8 | VAR_012197 | |||||
| Natural variant | 389 | 1 | G → R in CMDJ. Ref.8 Corresponds to variant rs28939080 [ dbSNP | Ensembl ]. | VAR_012198 | |||||
| Natural variant | 490 | 1 | Missing in CCAL2; sporadic. Ref.9 | VAR_017557 | |||||
Experimental info | |||||||||
| Sequence conflict | 78 | 1 | N → S in AAF88039. Ref.1 | ||||||
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Role of the mouse ank gene in control of tissue calcification and arthritis." Ho A.M., Johnson M.D., Kingsley D.M. Science 289:265-270(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Nakayama M., Hirosawa M., Ohara O. DNA Res. 7:273-281(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain. |
| [3] | "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment." Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J., Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P., Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E. Gray A.M.Genome Res. 13:2265-2270(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Cerebellum. |
| [5] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Ovary. |
| [7] | "Autosomal dominant craniometaphyseal dysplasia is caused by mutations in the transmembrane protein ANK." Reichenberger E., Tiziani V., Watanabe S., Park L., Ueki Y., Santanna C., Baur S.T., Shiang R., Grange D.K., Beighton P., Gardner J., Hamersma H., Sellars S., Ramesar R., Lidral A.C., Sommer A., Raposo do Amaral C.M., Gorlin R.J., Mulliken J.B., Olsen B.R. Am. J. Hum. Genet. 68:1321-1326(2001) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CMDJ SER-375 DEL; PHE-376 DEL AND ALA-380 INS. |
| [8] | "Heterozygous mutations in ANKH, the human ortholog of the mouse progressive ankylosis gene, result in craniometaphyseal dysplasia." Nuernberg P., Thiele H., Chandler D., Hoehne W., Cunningham M.L., Ritter H., Leschik G., Uhlmann K., Mischung C., Harrop K., Goldblatt J., Borochowitz Z.U., Kotzot D., Westermann F., Mundlos S., Braun H.-S., Laing N., Tinschert S. Nat. Genet. 28:37-41(2001) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CMDJ ARG-292; ARG-331; SER-375 DEL; PHE-377 DEL; ALA-380 INS AND ARG-389. |
| [9] | "Mutations in ANKH cause chondrocalcinosis." Pendleton A., Johnson M.D., Hughes A., Gurley K.A., Ho A.M., Doherty M., Dixey J., Gillet P., Loeuille D., McGrath R., Reginato A., Shiang R., Wright G., Netter P., Williams C., Kingsley D.M. Am. J. Hum. Genet. 71:933-940(2002) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CCAL2 THR-48 AND GLU-490 DEL. |
| [10] | "Autosomal dominant familial calcium pyrophosphate dihydrate deposition disease is caused by mutation in the transmembrane protein ANKH." Williams C.J., Zhang Y., Timms A., Bonavita G., Caeiro F., Broxholme J., Cuthbertson J., Jones Y., Marchegiani R., Reginato A., Russell R.G.G., Wordsworth B.P., Carr A.J., Brown M.A. Am. J. Hum. Genet. 71:985-991(2002) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT CCAL2 LEU-5. |
| [11] | "Mutations in the amino terminus of ANKH in two US families with calcium pyrophosphate dihydrate crystal deposition disease." Williams C.J., Pendleton A., Bonavita G., Reginato A.J., Hughes A.E., Peariso S., Doherty M., McCarty D.J., Ryan L.M. Arthritis Rheum. 48:2627-2631(2003) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT CCAL2 THR-5. |
| + | Additional computationally mapped references. |
Web resources
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF274753 mRNA. Translation: AAF88039.1. AB046801 mRNA. Translation: BAB13407.1. Different initiation. AY358503 mRNA. Translation: AAQ88867.1. AK315012 mRNA. Translation: BAG37504.1. CH471102 Genomic DNA. Translation: EAX08034.1. CH471102 Genomic DNA. Translation: EAX08035.1. BC009835 mRNA. Translation: AAH09835.1. BC014526 mRNA. Translation: AAH14526.1. |
| IPI | IPI00215869. |
| RefSeq | NP_473368.1. NM_054027.4. |
| UniGene | Hs.156727. |
3D structure databases | |
| ProteinModelPortal | Q9HCJ1. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9HCJ1. 1 interaction. |
| STRING | 9606.ENSP00000284268. |
Protein family/group databases | |
| TCDB | 2.A.66.9.1. multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) flippase superfamily. |
PTM databases | |
| PhosphoSite | Q9HCJ1. |
Polymorphism databases | |
| DMDM | 17366849. |
Proteomic databases | |
| PaxDb | Q9HCJ1. |
| PRIDE | Q9HCJ1. |
Protocols and materials databases | |
| DNASU | 56172. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000284268; ENSP00000284268; ENSG00000154122. |
| GeneID | 56172. |
| KEGG | hsa:56172. |
| UCSC | uc003jfm.4. human. |
Organism-specific databases | |
| CTD | 56172. |
| GeneCards | GC05M014706. |
| HGNC | HGNC:15492. ANKH. |
| MIM | 118600. phenotype. 123000. phenotype. 605145. gene. |
| neXtProt | NX_Q9HCJ1. |
| Orphanet | 1522. Craniometaphyseal dysplasia. 1416. Familial articular chondrocalcinosis. |
| PharmGKB | PA24801. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG19764. |
| HOGENOM | HOG000033943. |
| HOVERGEN | HBG018728. |
| InParanoid | Q9HCJ1. |
| OMA | YMGVHGA. |
| OrthoDB | EOG4MCX04. |
| PhylomeDB | Q9HCJ1. |
Gene expression databases | |
| ArrayExpress | Q9HCJ1. |
| Bgee | Q9HCJ1. |
| CleanEx | HS_ANKH. |
| Genevestigator | Q9HCJ1. |
| GermOnline | ENSG00000154122. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR009887. ANKH. [Graphical view] |
| Pfam | PF07260. ANKH. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | ANKH. human. |
| GenomeRNAi | 56172. |
| NextBio | 61818. |
| SOURCE | Search... |
Entry information
| Entry name | ANKH_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9HCJ1 Secondary accession number(s): B2RCA7, D3DTD4, Q9NQW2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 5 Human chromosome 5: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
