Q9HCD6 (TANC2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 74.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Protein TANC2 Alternative name(s): Tetratricopeptide repeat, ankyrin repeat and coiled-coil domain-containing protein 2 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 1990 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Sequence similarities | Belongs to the TANC family. Contains 11 ANK repeats. Contains 3 TPR repeats. |
| Sequence caution | The sequence CAB92314.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence CAB92314.1 differs from that shown. Reason: Frameshift at position 1221. Isoform 2: The sequence CAB92314.1 differs from that shown. Reason: Frameshift at position 363. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing |
| Domain | ANK repeat Repeat TPR repeat |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Molecular function | binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9HCD6-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9HCD6-2) The sequence of this isoform differs from the canonical sequence as follows: 1225-1225: I → IGCQTLPSRPR | ||||||
| Isoform 3 (identifier: Q9HCD6-3) The sequence of this isoform differs from the canonical sequence as follows: 944-971: VDHLDKNGQCALVHAALRGHLEVVKFLI → VLAAQLCCFSSLFLYFRCILFLISSVTS 972-1990: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 4 (identifier: Q9HCD6-4) The sequence of this isoform differs from the canonical sequence as follows: 1006-1010: IVSYL → VRSRQ 1011-1990: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1990 | 1990 | Protein TANC2 | PRO_0000333811 | |||||
Regions | |||||||||
| Repeat | 846 – 878 | 33 | ANK 1 | ||||||
| Repeat | 884 – 913 | 30 | ANK 2 | ||||||
| Repeat | 917 – 946 | 30 | ANK 3 | ||||||
| Repeat | 950 – 979 | 30 | ANK 4 | ||||||
| Repeat | 990 – 1019 | 30 | ANK 5 | ||||||
| Repeat | 1033 – 1062 | 30 | ANK 6 | ||||||
| Repeat | 1066 – 1095 | 30 | ANK 7 | ||||||
| Repeat | 1099 – 1128 | 30 | ANK 8 | ||||||
| Repeat | 1132 – 1161 | 30 | ANK 9 | ||||||
| Repeat | 1165 – 1194 | 30 | ANK 10 | ||||||
| Repeat | 1198 – 1227 | 30 | ANK 11 | ||||||
| Repeat | 1244 – 1277 | 34 | TPR 1 | ||||||
| Repeat | 1291 – 1324 | 34 | TPR 2 | ||||||
| Repeat | 1325 – 1358 | 34 | TPR 3 | ||||||
Amino acid modifications | |||||||||
| Modified residue | 169 | 1 | Phosphoserine Ref.7 | ||||||
| Modified residue | 171 | 1 | Phosphothreonine Ref.9 | ||||||
| Modified residue | 1442 | 1 | Phosphoserine Ref.6 | ||||||
| Modified residue | 1446 | 1 | Phosphoserine Ref.6 | ||||||
| Modified residue | 1457 | 1 | Phosphoserine Ref.8 | ||||||
| Modified residue | 1530 | 1 | Phosphoserine Ref.10 | ||||||
| Modified residue | 1534 | 1 | Phosphoserine Ref.10 | ||||||
| Modified residue | 1545 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1827 | 1 | Phosphoserine Ref.7 | ||||||
Natural variations | |||||||||
| Alternative sequence | 944 – 971 | 28 | VDHLD…VKFLI → VLAAQLCCFSSLFLYFRCIL FLISSVTS in isoform 3. | VSP_033546 | |||||
| Alternative sequence | 972 – 1990 | 1019 | Missing in isoform 3. | VSP_033547 | |||||
| Alternative sequence | 1006 – 1010 | 5 | IVSYL → VRSRQ in isoform 4. | VSP_033548 | |||||
| Alternative sequence | 1011 – 1990 | 980 | Missing in isoform 4. | VSP_033549 | |||||
| Alternative sequence | 1225 | 1 | I → IGCQTLPSRPR in isoform 2. | VSP_033550 | |||||
Experimental info | |||||||||
| Sequence conflict | 1210 | 1 | R → P in CAB92314. Ref.4 | ||||||
| Sequence conflict | 1234 | 1 | T → P in CAB92314. Ref.4 | ||||||
| Sequence conflict | 1249 | 1 | E → K in CAB92314. Ref.4 | ||||||
| Sequence conflict | 1285 | 1 | T → P in CAB92314. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage." Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L. Nusbaum C.Nature 440:1045-1049(2006) [PubMed: 16625196] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [2] | "Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Nakayama M., Hirosawa M., Ohara O. DNA Res. 7:273-281(2000) [PubMed: 10997877] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 127-1990 (ISOFORM 1). Tissue: Brain. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 676-1990 (ISOFORM 3), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 843-1990 (ISOFORM 4). Tissue: Embryo. |
| [4] | Dahllund L., Sjodin J., Wikstrom L. Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 869-1990 (ISOFORM 2). |
| [5] | "Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain." Hirosawa M., Nagase T., Ishikawa K., Kikuno R., Nomura N., Ohara O. DNA Res. 6:329-336(1999) [PubMed: 10574461] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1448-1990 (ISOFORMS 1/2). Tissue: Brain. |
| [6] | "Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry." Brill L.M., Salomon A.R., Ficarro S.B., Mukherji M., Stettler-Gill M., Peters E.C. Anal. Chem. 76:2763-2772(2004) [PubMed: 15144186] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1442 AND SER-1446, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [7] | "Large-scale characterization of HeLa cell nuclear phosphoproteins." Beausoleil S.A., Jedrychowski M., Schwartz D., Elias J.E., Villen J., Li J., Cohn M.A., Cantley L.C., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 101:12130-12135(2004) [PubMed: 15302935] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-169 AND SER-1827, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1457, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach." Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S. Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-171, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [10] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1530 AND SER-1534, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AC005828 Genomic DNA. No translation available. AC005972 Genomic DNA. No translation available. AC006270 Genomic DNA. No translation available. AC015923 Genomic DNA. No translation available. AB046856 mRNA. Translation: BAB13462.2. AK001077 mRNA. No translation available. AK021886 mRNA. No translation available. AJ278120 mRNA. Translation: CAB92314.1. Sequence problems. AB032974 mRNA. Translation: BAA86462.2. |
| IPI | IPI00868787. IPI00892805. IPI00893434. IPI00894531. |
| RefSeq | NP_079461.2. NM_025185.3. |
| UniGene | Hs.410889. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1D9S based on UniProtKB P55271. |
| ProteinModelPortal | Q9HCD6. |
| SMR | Q9HCD6. Positions 339-385, 859-1371. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q9HCD6. |
PTM databases | |
| PhosphoSite | Q9HCD6. |
Polymorphism databases | |
| DMDM | 189029946. |
Proteomic databases | |
| PeptideAtlas | Q9HCD6. |
| PRIDE | Q9HCD6. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000424789; ENSP00000387593; ENSG00000170921. |
| GeneID | 26115. |
| KEGG | hsa:26115. |
| UCSC | uc002jal.2. human. |
Organism-specific databases | |
| CTD | 26115. |
| GeneCards | GC17P061086. |
| H-InvDB | HIX0014063. |
| HGNC | HGNC:30212. TANC2. |
| HPA | HPA023274. |
| neXtProt | NX_Q9HCD6. |
| PharmGKB | PA142670837. |
| HUGE | Search... Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG09324. |
| GeneTree | ENSGT00600000084024. |
| HOVERGEN | HBG061464. |
| InParanoid | Q9HCD6. |
| OMA | TQQDLRV. |
Gene expression databases | |
| ArrayExpress | Q9HCD6. |
| Bgee | Q9HCD6. |
| CleanEx | HS_TANC2. |
| Genevestigator | Q9HCD6. |
Family and domain databases | |
| InterPro | IPR002110. Ankyrin_rpt. IPR020683. Ankyrin_rpt-contain_dom. IPR013026. TPR-contain. IPR011990. TPR-like_helical. IPR019734. TPR_repeat. [Graphical view] |
| Gene3D | G3DSA:1.25.40.20. ANK. 1 hit. G3DSA:1.25.40.10. TPR-like_helical. 1 hit. |
| Pfam | PF00023. Ank. 2 hits. PF12796. Ank_2. 2 hits. [Graphical view] |
| PRINTS | PR01415. ANKYRIN. |
| SMART | SM00248. ANK. 11 hits. SM00028. TPR. 3 hits. [Graphical view] |
| SUPFAM | SSF48403. ANK. 1 hit. |
| PROSITE | PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 6 hits. PS50005. TPR. 3 hits. PS50293. TPR_REGION. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 48114. |
Entry information
| Entry name | TANC2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9HCD6 Secondary accession number(s): Q9HAC3 Q9ULS2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 17 Human chromosome 17: entries, gene names and cross-references to MIM |
| SIMILARITY comments Index of protein domains and families |

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