Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q9HCD6 (TANC2_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein TANC2
Alternative name(s):
Tetratricopeptide repeat, ankyrin repeat and coiled-coil domain-containing protein 2
Gene names
Name:TANC2
Synonyms:KIAA1148, KIAA1636
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1990 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the TANC family.

Contains 11 ANK repeats.

Contains 3 TPR repeats.

Sequence caution

The sequence CAB92314.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

The sequence CAB92314.1 differs from that shown. Reason: Frameshift at position 1221.

Isoform 2: The sequence CAB92314.1 differs from that shown. Reason: Frameshift at position 363.

Ontologies

Keywords
   Coding sequence diversityAlternative splicing
   DomainANK repeat
Repeat
TPR repeat
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular functionbinding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Alternative products

This entry describes 4 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q9HCD6-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: Q9HCD6-2)

The sequence of this isoform differs from the canonical sequence as follows:
     1225-1225: I → IGCQTLPSRPR
Isoform 3 (identifier: Q9HCD6-3)

The sequence of this isoform differs from the canonical sequence as follows:
     944-971: VDHLDKNGQCALVHAALRGHLEVVKFLI → VLAAQLCCFSSLFLYFRCILFLISSVTS
     972-1990: Missing.
Note: No experimental confirmation available.
Isoform 4 (identifier: Q9HCD6-4)

The sequence of this isoform differs from the canonical sequence as follows:
     1006-1010: IVSYL → VRSRQ
     1011-1990: Missing.
Note: No experimental confirmation available.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 19901990Protein TANC2
PRO_0000333811

Regions

Repeat846 – 87833ANK 1
Repeat884 – 91330ANK 2
Repeat917 – 94630ANK 3
Repeat950 – 97930ANK 4
Repeat990 – 101930ANK 5
Repeat1033 – 106230ANK 6
Repeat1066 – 109530ANK 7
Repeat1099 – 112830ANK 8
Repeat1132 – 116130ANK 9
Repeat1165 – 119430ANK 10
Repeat1198 – 122730ANK 11
Repeat1244 – 127734TPR 1
Repeat1291 – 132434TPR 2
Repeat1325 – 135834TPR 3

Amino acid modifications

Modified residue1691Phosphoserine Ref.7
Modified residue1711Phosphothreonine Ref.9
Modified residue14421Phosphoserine Ref.6
Modified residue14461Phosphoserine Ref.6
Modified residue14571Phosphoserine Ref.8
Modified residue15301Phosphoserine Ref.10
Modified residue15341Phosphoserine Ref.10
Modified residue15451Phosphoserine By similarity
Modified residue18271Phosphoserine Ref.7

Natural variations

Alternative sequence944 – 97128VDHLD…VKFLI → VLAAQLCCFSSLFLYFRCIL FLISSVTS in isoform 3.
VSP_033546
Alternative sequence972 – 19901019Missing in isoform 3.
VSP_033547
Alternative sequence1006 – 10105IVSYL → VRSRQ in isoform 4.
VSP_033548
Alternative sequence1011 – 1990980Missing in isoform 4.
VSP_033549
Alternative sequence12251I → IGCQTLPSRPR in isoform 2.
VSP_033550

Experimental info

Sequence conflict12101R → P in CAB92314. Ref.4
Sequence conflict12341T → P in CAB92314. Ref.4
Sequence conflict12491E → K in CAB92314. Ref.4
Sequence conflict12851T → P in CAB92314. Ref.4

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified May 20, 2008. Version 3.
Checksum: E835D98F5C546365

FASTA1,990219,650
        10         20         30         40         50         60 
MFRNSLKMLL TGGKSSRKNR SSDGGSEEPP DRRQSSVDSR QSRSGQGGIS TESDCAFEPD 

        70         80         90        100        110        120 
YAVPPLPVSE GDAEQELGPP PSVDEAANTL MTRLGFLLGE KVTEVQPGDQ YSMEVQDENQ 

       130        140        150        160        170        180 
TSAITQRISP CSTLTSSTAS PPASSPCSTL PPISTNATAK DCSYGAVTSP TSTLESRDSG 

       190        200        210        220        230        240 
IIATLTSYSE NVERTKYAGE SSKELGSGGN IKPWQSQKSS MDSCLYRVDE NMTASTYSLN 

       250        260        270        280        290        300 
KIPERNLETV LSQSVQSIPL YLMPRPNSVA ATSSAHLEDL AYLDEQRHTP LRTSLRMPRQ 

       310        320        330        340        350        360 
SMGGARTQQD LRVRFAPYRP PDISLKPLLF EVPSITTESV FVGRDWVFHE IDAQLQSSNA 

       370        380        390        400        410        420 
SVNQGVVIVG NIGFGKTAII SRLVALSCHG TRMRQIASDS PHASPKHVDA NRELPLTQPP 

       430        440        450        460        470        480 
SAHSSITSGS CPGTPEMRRR QEEAMRRLAS QVVAYHYCQA DNAYTCLVPE FVHNVAALLC 

       490        500        510        520        530        540 
RSPQLTAYRE QLLREPHLQS MLSLRSCVQD PMASFRRGVL EPLENLHKER KIPDEDFIIL 

       550        560        570        580        590        600 
IDGLNEAEFH KPDYGDTIVS FLSKMIGKFP SWLKLIVTVR TSLQEITKLL PFHRIFLDRL 

       610        620        630        640        650        660 
EENEAIDQDL QAYILHRIHS SSEIQNNISL NGKMDNTTFG KLSSHLKTLS QGSYLYLKLT 

       670        680        690        700        710        720 
FDLIEKGYLV LKSSSYKVVP VSLSEVYLLQ CNMKFPTQSS FDRVMPLLNV AVASLHPLTD 

       730        740        750        760        770        780 
EHIFQAINAG SIEGTLEWED FQQRMENLSM FLIKRRDMTR MFVHPSFREW LIWREEGEKT 

       790        800        810        820        830        840 
KFLCDPRSGH TLLAFWFSRQ EGKLNRQQTI ELGHHILKAH IFKGLSKKVG VSSSILQGLW 

       850        860        870        880        890        900 
ISYSTEGLSM ALASLRNLYT PNIKVSRLLI LGGANINYRT EVLNNAPILC VQSHLGYTEM 

       910        920        930        940        950        960 
VALLLEFGAN VDASSESGLT PLGYAAAAGY LSIVVLLCKK RAKVDHLDKN GQCALVHAAL 

       970        980        990       1000       1010       1020 
RGHLEVVKFL IQCDWTMAGQ QQGVFKKSHA IQQALIAAAS MGYTEIVSYL LDLPEKDEEE 

      1030       1040       1050       1060       1070       1080 
VERAQINSFD SLWGETALTA AAGRGKLEVC RLLLEQGAAV AQPNRRGAVP LFSTVRQGHW 

      1090       1100       1110       1120       1130       1140 
QIVDLLLTHG ADVNMADKQG RTPLMMAASE GHLGTVDFLL AQGASIALMD KEGLTALSWA 

      1150       1160       1170       1180       1190       1200 
CLKGHLSVVR SLVDNGAATD HADKNGRTPL DLAAFYGDAE VVQFLVDHGA MIEHVDYSGM 

      1210       1220       1230       1240       1250       1260 
RPLDRAVGCR NTSVVVTLLK KGAKIGPATW AMATSKPDIM IILLSKLMEE GDMFYKKGKV 

      1270       1280       1290       1300       1310       1320 
KEAAQRYQYA LKKFPREGFG EDLKTFRELK VSLLLNLSRC RRKMNDFGMA EEFATKALEL 

      1330       1340       1350       1360       1370       1380 
KPKSYEAYYA RARAKRSSRQ FAAALEDLNE AIKLCPNNRE IQRLLLRVEE ECRQMQQPQQ 

      1390       1400       1410       1420       1430       1440 
PPPPPQPQQQ LPEEAEPEPQ HEDIYSVQDI FEEEYLEQDV ENVSIGLQTE ARPSQGLPVI 

      1450       1460       1470       1480       1490       1500 
QSPPSSPPHR DSAYISSSPL GSHQVFDFRS SSSVGSPTRQ TYQSTSPALS PTHQNSHYRP 

      1510       1520       1530       1540       1550       1560 
SPPHTSPAHQ GGSYRFSPPP VGGQGKEYPS PPPSPLRRGP QYRASPPAES MSVYRSQSGS 

      1570       1580       1590       1600       1610       1620 
PVRYQQETSV SQLPGRPKSP LSKMAQRPYQ MPQLPVAVPQ QGLRLQPAKA QIVRSNQPSP 

      1630       1640       1650       1660       1670       1680 
AVHSSTVIPT GAYGQVAHSM ASKYQSSQGD IGVSQSRLVY QGSIGGIVGD GRPVQHVQAS 

      1690       1700       1710       1720       1730       1740 
LSAGAICQHG GLTKEDLPQR PSSAYRGGVR YSQTPQIGRS QSASYYPVCH SKLDLERSSS 

      1750       1760       1770       1780       1790       1800 
QLGSPDVSHL IRRPISVNPN EIKPHPPTPR PLLHSQSVGL RFSPSSNSIS STSNLTPTFR 

      1810       1820       1830       1840       1850       1860 
PSSSIQQMEI PLKPAYERSC DELSPVSPTQ GGYPSEPTRS RTTPFMGIID KTARTQQYPH 

      1870       1880       1890       1900       1910       1920 
LHQQNRTWAV SSVDTVLSPT SPGNLPQPES FSPPSSISNI AFYNKTNNAQ NGHLLEDDYY 

      1930       1940       1950       1960       1970       1980 
SPHGMLANGS RGDLLERVSQ ASSYPDVKVA RTLPVAQAYQ DNLYRQLSRD SRQGQTSPIK 

      1990 
PKRPFVESNV 

« Hide

Isoform 2 [UniParc].

Checksum: CABC5E9427E0AB68
Show »

FASTA2,000220,746
Isoform 3 [UniParc].

Checksum: A081DBE1D3316880
Show »

FASTA971107,895
Isoform 4 [UniParc].

Checksum: 38BFC3EE8DD7BD26
Show »

FASTA1,010112,154

References

« Hide 'large scale' references
[1]"DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage."
Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L. expand/collapse author list , Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J., DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S., Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E., Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K., LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J., Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A., Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K., Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D., Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A., Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.
Nature 440:1045-1049(2006) [PubMed: 16625196] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro."
Nagase T., Kikuno R., Nakayama M., Hirosawa M., Ohara O.
DNA Res. 7:273-281(2000) [PubMed: 10997877] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 127-1990 (ISOFORM 1).
Tissue: Brain.
[3]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 676-1990 (ISOFORM 3), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 843-1990 (ISOFORM 4).
Tissue: Embryo.
[4]Dahllund L., Sjodin J., Wikstrom L.
Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 869-1990 (ISOFORM 2).
[5]"Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain."
Hirosawa M., Nagase T., Ishikawa K., Kikuno R., Nomura N., Ohara O.
DNA Res. 6:329-336(1999) [PubMed: 10574461] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1448-1990 (ISOFORMS 1/2).
Tissue: Brain.
[6]"Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry."
Brill L.M., Salomon A.R., Ficarro S.B., Mukherji M., Stettler-Gill M., Peters E.C.
Anal. Chem. 76:2763-2772(2004) [PubMed: 15144186] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1442 AND SER-1446, MASS SPECTROMETRY.
Tissue: Leukemic T-cell.
[7]"Large-scale characterization of HeLa cell nuclear phosphoproteins."
Beausoleil S.A., Jedrychowski M., Schwartz D., Elias J.E., Villen J., Li J., Cohn M.A., Cantley L.C., Gygi S.P.
Proc. Natl. Acad. Sci. U.S.A. 101:12130-12135(2004) [PubMed: 15302935] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-169 AND SER-1827, MASS SPECTROMETRY.
Tissue: Cervix carcinoma.
[8]"Global, in vivo, and site-specific phosphorylation dynamics in signaling networks."
Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M.
Cell 127:635-648(2006) [PubMed: 17081983] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1457, MASS SPECTROMETRY.
Tissue: Cervix carcinoma.
[9]"Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach."
Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.
Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-171, MASS SPECTROMETRY.
Tissue: Embryonic kidney.
[10]"Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1530 AND SER-1534, MASS SPECTROMETRY.
Tissue: Leukemic T-cell.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC005828 Genomic DNA. No translation available.
AC005972 Genomic DNA. No translation available.
AC006270 Genomic DNA. No translation available.
AC015923 Genomic DNA. No translation available.
AB046856 mRNA. Translation: BAB13462.2.
AK001077 mRNA. No translation available.
AK021886 mRNA. No translation available.
AJ278120 mRNA. Translation: CAB92314.1. Sequence problems.
AB032974 mRNA. Translation: BAA86462.2.
IPIIPI00868787.
IPI00892805.
IPI00893434.
IPI00894531.
RefSeqNP_079461.2. NM_025185.3.
UniGeneHs.410889.

3D structure databases

HSSPHSSP built from PDB template 1D9S based on UniProtKB P55271.
ProteinModelPortalQ9HCD6.
SMRQ9HCD6. Positions 339-385, 859-1371.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9HCD6.

PTM databases

PhosphoSiteQ9HCD6.

Polymorphism databases

DMDM189029946.

Proteomic databases

PeptideAtlasQ9HCD6.
PRIDEQ9HCD6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000424789; ENSP00000387593; ENSG00000170921.
GeneID26115.
KEGGhsa:26115.
UCSCuc002jal.2. human.

Organism-specific databases

CTD26115.
GeneCardsGC17P061086.
H-InvDBHIX0014063.
HGNCHGNC:30212. TANC2.
HPAHPA023274.
neXtProtNX_Q9HCD6.
PharmGKBPA142670837.
HUGESearch...
Search...
GenAtlasSearch...

Phylogenomic databases

eggNOGprNOG09324.
GeneTreeENSGT00600000084024.
HOVERGENHBG061464.
InParanoidQ9HCD6.
OMATQQDLRV.

Gene expression databases

ArrayExpressQ9HCD6.
BgeeQ9HCD6.
CleanExHS_TANC2.
GenevestigatorQ9HCD6.

Family and domain databases

InterProIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR013026. TPR-contain.
IPR011990. TPR-like_helical.
IPR019734. TPR_repeat.
[Graphical view]
Gene3DG3DSA:1.25.40.20. ANK. 1 hit.
G3DSA:1.25.40.10. TPR-like_helical. 1 hit.
PfamPF00023. Ank. 2 hits.
PF12796. Ank_2. 2 hits.
[Graphical view]
PRINTSPR01415. ANKYRIN.
SMARTSM00248. ANK. 11 hits.
SM00028. TPR. 3 hits.
[Graphical view]
SUPFAMSSF48403. ANK. 1 hit.
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 6 hits.
PS50005. TPR. 3 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio48114.

Entry information

Entry nameTANC2_HUMAN
AccessionPrimary (citable) accession number: Q9HCD6
Secondary accession number(s): Q9HAC3 expand/collapse secondary AC list , Q9NW88, Q9NXY9, Q9ULS2
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 20, 2008
Last modified: January 25, 2012
This is version 74 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 17

Human chromosome 17: entries, gene names and cross-references to MIM

SIMILARITY comments

Index of protein domains and families