Q9HC16 (ABC3G_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 116.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: DNA dC->dU-editing enzyme APOBEC-3G EC=3.5.4.14 Alternative name(s): APOBEC-related cytidine deaminase Short name=APOBEC-related protein Short name=ARCD APOBEC-related protein 9 Short name=ARP-9 CEM-15 Short name=CEM15 Deoxycytidine deaminase Short name=A3G | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 384 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | DNA deaminase (cytidine deaminase) which acts as an inhibitor of retrovirus replication and retrotransposon mobility via deaminase-dependent and -independent mechanisms. Exhibits potent antiviral activity against vif-deficient HIV-1. After the penetration of retroviral nucleocapsids into target cells of infection and the initiation of reverse transcription, it can induce the conversion of cytosine to uracil in the minus-sense single-strand viral DNA, leading to G-to-A hypermutations in the subsequent plus-strand viral DNA. The resultant detrimental levels of mutations in the proviral genome, along with a deamination-independent mechanism that works prior to the proviral integration, together exert efficient antiretroviral effects in infected target cells. Selectively targets single-stranded DNA and does not deaminate double-stranded DNA or single-or double-stranded RNA. Exhibits antiviral activity also against simian immunodeficiency viruses (SIVs), hepatitis B virus (HBV), equine infectious anemia virus (EIAV), xenotropic MuLV-related virus (XMRV) and simian foamy virus (SFV). May inhibit the mobility of LTR and non-LTR retrotransposons. Ref.1 Ref.10 Ref.11 Ref.12 Ref.13 Ref.14 Ref.15 Ref.18 Ref.23 Ref.24 Ref.26 Ref.33 Ref.35 Ref.36 Ref.40 Ref.41 Ref.46 Ref.48 Ref.49 Ref.52 Ref.53 Ref.54 |
| Catalytic activity | Deoxycytidine + H2O = deoxyuridine + NH3. Ref.13 Ref.54 Ref.55 Ref.56 |
| Cofactor | Zinc. |
| Enzyme regulation | Assembly into ribonucleoprotein complexes of high-molecular-mass (HMM) inhibits its enzymatic activity. Antiviral activity is neutralized by the HIV-1 virion infectivity factor (VIF), that prevents its incorporation into progeny HIV-1 virions by both inhibiting its translation and/or by inducing its ubiquitination and subsequent degradation by the 26S proteasome. Can also be neutralized by simian immunodeficiency virus sooty mangabey monkey virus (SIV-sm) and chimpanzee immunodeficiency virus (SIV-cpz) VIF. Ref.41 |
| Subunit structure | Homodimer. Homooligomer. Can bind RNA to form ribonucleoprotein complexes of high-molecular-mass (HMM) or low-molecular-mass (LMM). HMM is inactive and heterogeneous in protein composition because of binding nonselectively to cellular RNAs, which in turn are associated with variety of cellular proteins. The LMM form which is enzymatically active has few or no RNAs associated. Its ability to form homooligomer is distinct from its ability to assemble into HMM. Interacts with APOBEC3B, APOBEC3F, MOV10, EIF2C2/AGO2, EIF4E, EIF4ENIF1, DCP2 and DDX6 in an RNA-dependent manner. Interacts with EIF2C1/AGO1, EIF2C3/AGO3 and PKA/PRKACA. Interacts with HIV-1 VIF and reverse transcriptase/ribonuclease H. Interacts with hepatitis B virus capsid protein. Ref.9 Ref.14 Ref.16 Ref.17 Ref.25 Ref.27 Ref.30 Ref.32 Ref.38 Ref.46 Ref.47 Ref.48 |
| Subcellular location | Cytoplasm. Nucleus. Cytoplasm › P-body. Note: Mainly cytoplasmic. Small amount are found in the nucleus. During HIV-1 infection, virion-encapsidated in absence of HIV-1 VIF. Ref.11 Ref.24 Ref.27 Ref.31 Ref.39 Ref.41 Ref.48 |
| Tissue specificity | Expressed in spleen, testes, ovary and peripheral blood leukocytes and CD4+ lymphocytes. Also expressed in non-permissive peripheral blood mononuclear cells, and several tumor cell lines; no expression detected in permissive lymphoid and non-lymphoid cell lines. Exists only in the LMM form in peripheral blood-derived resting CD4 T-cells and monocytes, both of which are refractory to HIV-1 infection. LMM is converted to a HMM complex when resting CD4 T cells are activated or when monocytes are induced to differentiate into macrophages. This change correlates with increased susceptibility of these cells to HIV-1 infection. Ref.9 Ref.10 Ref.37 |
| Induction | |
| Domain | The CMP/dCMP deaminase zinc-binding 1 domain mediates RNA binding, RNA-dependent oligomerization and virion incorporation whereas the CMP/dCMP deaminase zinc-binding 2 domain confers deoxycytidine deaminase activity and substrate sequence specificity (Ref.25). Ref.25 Ref.43 |
| Post-translational modification | Ubiquitinated in the presence of HIV-1 VIF. Association with VIF targets the protein for proteolysis by the ubiquitin-dependent proteasome pathway. Ref.16 Ref.17 Ref.18 Phosphorylation at Thr-32 reduces its binding to HIV-1 VIF and subsequent ubiquitination and degradation thus promoting its antiviral activity. |
| Miscellaneous | Accumulation of APOBEC3G induced non-lethal hypermutation could contribute to the genetic variation of primate lentiviral populations. It is one of seven related genes or pseudogenes found in a cluster, thought to result from gene duplication, on chromosome 22. |
| Sequence similarities | Belongs to the cytidine and deoxycytidylate deaminase family. Contains 2 CMP/dCMP deaminase zinc-binding domains. |
| Sequence caution | The sequence CAB45274.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9HC16-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 3 (identifier: Q9HC16-3) The sequence of this isoform differs from the canonical sequence as follows: 58-79: VYSELKYHPEMRFFHWFSKWRK → VPPGLQSLCRQELSQLGKQTTH 80-384: Missing. | ||||||
| Note: May be due to a competing donor splice site. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 384 | 384 | DNA dC->dU-editing enzyme APOBEC-3G | PRO_0000171761 | |||||||||||||||||||||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||||||||||||||||||||
| Domain | 65 – 100 | 36 | CMP/dCMP deaminase zinc-binding 1 | ||||||||||||||||||||||||||||||||||||||||||
| Domain | 257 – 291 | 35 | CMP/dCMP deaminase zinc-binding 2 | ||||||||||||||||||||||||||||||||||||||||||
| Region | 1 – 60 | 60 | Essential for cytoplasmic localization | ||||||||||||||||||||||||||||||||||||||||||
| Region | 209 – 336 | 128 | Necessary for homooligomerization | ||||||||||||||||||||||||||||||||||||||||||
| Region | 213 – 215 | 3 | Interaction with DNA Probable | ||||||||||||||||||||||||||||||||||||||||||
| Region | 313 – 320 | 8 | Interaction with DNA Probable | ||||||||||||||||||||||||||||||||||||||||||
Sites | |||||||||||||||||||||||||||||||||||||||||||||
| Active site | 259 | 1 | Proton donor Probable | ||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 65 | 1 | Zinc By similarity | ||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 97 | 1 | Zinc By similarity | ||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 100 | 1 | Zinc By similarity | ||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 257 | 1 | Zinc; catalytic | ||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 288 | 1 | Zinc; catalytic | ||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 291 | 1 | Zinc; catalytic | ||||||||||||||||||||||||||||||||||||||||||
| Site | 244 | 1 | Interaction with DNA Probable | ||||||||||||||||||||||||||||||||||||||||||
Amino acid modifications | |||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 32 | 1 | Phosphothreonine; by PKA Ref.32 Ref.39 | ||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 218 | 1 | Phosphothreonine; by PKA and CAMK2 Ref.39 | ||||||||||||||||||||||||||||||||||||||||||
Natural variations | |||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 58 – 79 | 22 | VYSEL…SKWRK → VPPGLQSLCRQELSQLGKQT TH in isoform 3. | VSP_009588 | |||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 80 – 384 | 305 | Missing in isoform 3. | VSP_009589 | |||||||||||||||||||||||||||||||||||||||||
| Natural variant | 186 | 1 | H → R. Ref.5 Corresponds to variant rs8177832 [ dbSNP | Ensembl ]. | VAR_017837 | |||||||||||||||||||||||||||||||||||||||||
| Natural variant | 256 | 1 | R → H. Corresponds to variant rs17000736 [ dbSNP | Ensembl ]. | VAR_048723 | |||||||||||||||||||||||||||||||||||||||||
| Natural variant | 275 | 1 | Q → E. Ref.5 Corresponds to variant rs17496046 [ dbSNP | Ensembl ]. | VAR_025060 | |||||||||||||||||||||||||||||||||||||||||
Experimental info | |||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 67 | 1 | E → A: Loss of cytidine deaminase activity and significant decrease in antiviral activity; when associated with A-259. Ref.11 Ref.15 Ref.25 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 67 | 1 | E → A: No effect on cytidine deaminase and antiviral activity. Ref.11 Ref.15 Ref.25 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 67 | 1 | E → Q: Decreases cytidine deaminase activity. Ref.11 Ref.15 Ref.25 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 81 | 1 | H → A: Decreases cytidine deaminase activity. Ref.11 Ref.13 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 85 | 1 | E → Q: Does not decrease cytidine deaminase activity. Ref.11 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 97 | 1 | C → A: Decreases cytidine deaminase activity. Ref.11 Ref.13 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 100 | 1 | C → A or S: Decreases cytidine deaminase activity. Ref.11 Ref.13 Ref.15 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 128 | 1 | D → K: Complete loss of VIF-induced degradation. Ref.22 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 213 | 1 | R → A: Slightly reduces enzyme activity. Ref.54 Ref.55 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 213 | 1 | R → E: Reduces enzyme activity. Ref.54 Ref.55 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 215 | 1 | R → A or E: Abolishes enzyme activity. Ref.54 Ref.55 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 217 | 1 | E → K: Modifies the spectrum of action against mobile genetic elements; when associated with K-247. Ref.40 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 218 | 1 | T → A: Loss of phosphorylation. No effect on cytidine deaminase activity or HIV-1 restriction activity. Ref.39 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 218 | 1 | T → E: Phosphomimetic mutant which shows loss of cytidine deaminase activity and HIV-1 restriction activity. Ref.39 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 221 | 1 | C → S: Does not decrease cytidine deaminase activity. Ref.11 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 244 | 1 | N → A: Abolishes enzyme activity. Ref.55 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 247 | 1 | P → K: Modifies the spectrum of action against mobile genetic elements; when associated with K-217. Ref.40 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 256 | 1 | R → E: Strongly reduces enzyme activity. | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 257 | 1 | H → A: Decreases cytidine deaminase activity. Ref.11 Ref.13 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 259 | 1 | E → A: Loss of cytidine deaminase activity and significant decrease in antiviral activity. Ref.11 Ref.15 Ref.25 Ref.54 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 259 | 1 | E → A: Loss of cytidine deaminase activity and significant decrease in antiviral activity; when associated with A-67. | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 259 | 1 | E → Q: Decreases cytidine deaminase activity and antiviral activity. Ref.11 Ref.15 Ref.25 Ref.54 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 285 | 1 | W → A: Abolishes enzyme activity. Ref.54 Ref.55 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 288 | 1 | C → A: Decreases cytidine deaminase activity. Ref.11 Ref.13 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 291 | 1 | C → A or S: Decreases cytidine deaminase activity. Ref.11 Ref.13 Ref.15 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 313 | 1 | R → A or E: Abolishes enzyme activity. Ref.54 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 315 | 1 | Y → A: Abolishes enzyme activity. Ref.55 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 320 | 1 | R → A: Slightly reduces enzyme activity. Ref.54 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 320 | 1 | R → E: Reduces enzyme activity. Ref.54 | ||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 323 | 1 | E → Q: Does not decrease cytidine deaminase activity. Ref.11 | ||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 162 | 1 | S → N no nucleotide entry Ref.1 | ||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 370 | 1 | D → Y no nucleotide entry Ref.1 | ||||||||||||||||||||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 195 – 197 | 3 | |||||||||||||||||||||||||||||||||||||||||||
| Helix | 199 – 206 | 8 | |||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 213 – 217 | 5 | |||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 219 – 228 | 10 | |||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 231 – 234 | 4 | |||||||||||||||||||||||||||||||||||||||||||
| Helix | 236 – 238 | 3 | |||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 240 – 243 | 4 | |||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 247 – 250 | 4 | |||||||||||||||||||||||||||||||||||||||||||
| Helix | 258 – 265 | 8 | |||||||||||||||||||||||||||||||||||||||||||
| Helix | 266 – 269 | 4 | |||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 273 – 275 | 3 | |||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 277 – 285 | 9 | |||||||||||||||||||||||||||||||||||||||||||
| Helix | 289 – 301 | 13 | |||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 305 – 313 | 9 | |||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 318 – 320 | 3 | |||||||||||||||||||||||||||||||||||||||||||
| Helix | 321 – 330 | 10 | |||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 334 – 337 | 4 | |||||||||||||||||||||||||||||||||||||||||||
| Helix | 340 – 350 | 11 | |||||||||||||||||||||||||||||||||||||||||||
| Helix | 364 – 379 | 16 | |||||||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The human immunodeficiency virus type 1 Vif protein reduces intracellular expression and inhibits packaging of APOBEC3G (CEM15), a cellular inhibitor of virus infectivity." Kao S., Khan M.A., Miyagi E., Plishka R., Buckler-White A., Strebel K. J. Virol. 77:11398-11407(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION IN HIV-1 INFECTION INHIBITION. Tissue: Kidney. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Synovium and Teratocarcinoma. |
| [3] | "Novel genes expressed in hematopoietic stem/progenitor cells from myelodysplastic syndrome patients." Huang C., Qian B., Tu Y., Gu W., Wang Y., Han Z., Chen Z. Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Hematopoietic stem cell. |
| [4] | "A genome annotation-driven approach to cloning the human ORFeome." Collins J.E., Wright C.L., Edwards C.A., Davis M.P., Grinham J.A., Cole C.G., Goward M.E., Aguado B., Mallya M., Mokrab Y., Huckle E.J., Beare D.M., Dunham I. Genome Biol. 5:R84.1-R84.11(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
| [5] | SeattleSNPs program for genomic applications Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS ARG-186 AND GLU-275. |
| [6] | "The DNA sequence of human chromosome 22." Dunham I., Hunt A.R., Collins J.E., Bruskiewich R., Beare D.M., Clamp M., Smink L.J., Ainscough R., Almeida J.P., Babbage A.K., Bagguley C., Bailey J., Barlow K.F., Bates K.N., Beasley O.P., Bird C.P., Blakey S.E., Bridgeman A.M. Wright H.Nature 402:489-495(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [8] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3). Tissue: Skin and Uterus. |
| [9] | "An anthropoid-specific locus of orphan C to U RNA-editing enzymes on chromosome 22." Jarmuz A., Chester A., Bayliss J., Gisbourne J., Dunham I., Scott J., Navaratnam N. Genomics 79:285-296(2002) [PubMed] [Europe PMC] [Abstract] Cited for: GENE FAMILY ORGANIZATION, TISSUE SPECIFICITY, SUBUNIT, RNA-BINDING, ZINC-BINDING. |
| [10] | "Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein." Sheehy A.M., Gaddis N.C., Choi J.D., Malim M.H. Nature 418:646-650(2002) [PubMed] [Europe PMC] [Abstract] Cited for: TISSUE SPECIFICITY, FUNCTION IN HIV-1 INFECTION INHIBITION. Tissue: T-cell lymphoma. |
| [11] | "Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts." Mangeat B., Turelli P., Caron G., Friedli M., Perrin L., Trono D. Nature 424:99-103(2003) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION, FUNCTION IN DNA C TO U EDITING, MUTAGENESIS OF GLU-67; HIS-81; GLU-85; CYS-97; CYS-100; CYS-221; HIS-257; GLU-259; CYS-288; CYS-291 AND GLU-323. |
| [12] | "DNA deamination mediates innate immunity to retroviral infection." Harris R.S., Bishop K.N., Sheehy A.M., Craig H.M., Petersen-Mahrt S.K., Watt I.N., Neuberger M.S., Malim M.H. Cell 113:803-809(2003) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN DNA C TO U EDITING, MLV INFECTION INHIBITION. |
| [13] | "The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA." Zhang H., Yang B., Pomerantz R.J., Zhang C., Arunachalam S.C., Gao L. Nature 424:94-98(2003) [PubMed] [Europe PMC] [Abstract] Cited for: CATALYTIC ACTIVITY, FUNCTION IN DNA C TO U EDITING, MUTAGENESIS OF HIS-81; CYS-97; CYS-100; HIS-257; CYS-288 AND CYS-291. |
| [14] | "Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif." Mariani R., Chen D., Schroefelbauer B., Navarro F., Koenig R., Bollman B., Muenk C., Nymark-McMahon H., Landau N.R. Cell 114:21-31(2003) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN DNA C TO U EDITING, INTERACTION WITH VIF. |
| [15] | "The enzymatic activity of CEM15/Apobec-3G is essential for the regulation of the infectivity of HIV-1 virion but not a sole determinant of its antiviral activity." Shindo K., Takaori-Kondo A., Kobayashi M., Abudu A., Fukunaga K., Uchiyama T. J. Biol. Chem. 278:44412-44416(2003) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN DNA C TO U EDITING, INFECTION REGULATION OF HIV-1, MUTAGENESIS OF GLU-67; CYS-100; GLU-259 AND CYS-291. Tissue: T-cell lymphoma. |
| [16] | "HIV-1 Vif blocks the antiviral activity of APOBEC3G by impairing both its translation and intracellular stability." Stopak K., de Noronha C., Yonemoto W., Greene W.C. Mol. Cell 12:591-601(2003) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH VIF, PROTEASOME MEDIATED DEGRADATION, TRANSLATION INHIBITION. |
| [17] | "HIV-1 Vif protein binds the editing enzyme APOBEC3G and induces its degradation." Marin M., Rose K.M., Kozak S.L., Kabat D. Nat. Med. 9:1398-1403(2003) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH VIF, UBIQUITINATION. |
| [18] | "The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif." Sheehy A.M., Gaddis N.C., Malim M.H. Nat. Med. 9:1404-1407(2003) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN DNA C TO U EDITING, UBIQUITINATION. |
| [19] | "Messenger RNA editing in mammals: new members of the APOBEC family seeking roles in the family business." Wedekind J.E., Dance G.S.C., Sowden M.P., Smith H.C. Trends Genet. 19:207-216(2003) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW ON APOBEC FAMILY. |
| [20] | "Death and the retrovirus." Vartanian J.P., Sommer P., Wain-Hobson S. Trends Mol. Med. 9:409-413(2003) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [21] | "HIV-1 Vif: counteracting innate antiretroviral defenses." Cullen B.R. Mol. Ther. 8:525-527(2003) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [22] | "A single amino acid substitution in human APOBEC3G antiretroviral enzyme confers resistance to HIV-1 virion infectivity factor-induced depletion." Xu H., Svarovskaia E.S., Barr R., Zhang Y., Khan M.A., Strebel K., Pathak V.K. Proc. Natl. Acad. Sci. U.S.A. 101:5652-5657(2004) [PubMed] [Europe PMC] [Abstract] Cited for: MUTAGENESIS OF ASP-128. |
| [23] | "Inhibition of hepatitis B virus replication by APOBEC3G." Turelli P., Mangeat B., Jost S., Vianin S., Trono D. Science 303:1829-1829(2004) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN HBV INHIBITION. |
| [24] | "APOBEC3A is a potent inhibitor of adeno-associated virus and retrotransposons." Chen H., Lilley C.E., Yu Q., Lee D.V., Chou J., Narvaiza I., Landau N.R., Weitzman M.D. Curr. Biol. 16:480-485(2006) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN RETROTRANSPOSITION, SUBCELLULAR LOCATION. |
| [25] | "Reversed functional organization of mouse and human APOBEC3 cytidine deaminase domains." Hakata Y., Landau N.R. J. Biol. Chem. 281:36624-36631(2006) [PubMed] [Europe PMC] [Abstract] Cited for: DOMAIN CMP/DCMP DEAMINASE ZINC-BINDING, SUBUNIT, MUTAGENESIS OF GLU-67 AND GLU-259. |
| [26] | "Restriction of foamy viruses by APOBEC cytidine deaminases." Delebecque F., Suspene R., Calattini S., Casartelli N., Saib A., Froment A., Wain-Hobson S., Gessain A., Vartanian J.P., Schwartz O. J. Virol. 80:605-614(2006) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN SFV RESTRICTION. |
| [27] | "Human retroviral host restriction factors APOBEC3G and APOBEC3F localize to mRNA processing bodies." Wichroski M.J., Robb G.B., Rana T.M. PLoS Pathog. 2:E41-E41(2006) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION, INTERACTION WITH APOBEC3F; EIF2C2; EIF4E; EIF4ENIF1; DCP2 AND DDX6. |
| [28] | "The APOBEC3 cytidine deaminases: an innate defensive network opposing exogenous retroviruses and endogenous retroelements." Chiu Y.L., Greene W.C. Annu. Rev. Immunol. 26:317-353(2008) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [29] | "Hepatitis B: modern concepts in pathogenesis--APOBEC3 cytidine deaminases as effectors in innate immunity against the hepatitis B virus." Bonvin M., Greeve J. Curr. Opin. Infect. Dis. 21:298-303(2008) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW ON FUNCTION IN HBV RESTRICTION. |
| [30] | "APOBEC3G subunits self-associate via the C-terminal deaminase domain." Bennett R.P., Salter J.D., Liu X., Wedekind J.E., Smith H.C. J. Biol. Chem. 283:33329-33336(2008) [PubMed] [Europe PMC] [Abstract] Cited for: SUBUNIT. |
| [31] | "Two regions within the amino-terminal half of APOBEC3G cooperate to determine cytoplasmic localization." Stenglein M.D., Matsuo H., Harris R.S. J. Virol. 82:9591-9599(2008) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [32] | "Phosphorylation of APOBEC3G by protein kinase A regulates its interaction with HIV-1 Vif." Shirakawa K., Takaori-Kondo A., Yokoyama M., Izumi T., Matsui M., Io K., Sato T., Sato H., Uchiyama T. Nat. Struct. Mol. Biol. 15:1184-1191(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION AT THR-32, INTERACTION WITH PRKACA. |
| [33] | "Restriction of equine infectious anemia virus by equine APOBEC3 cytidine deaminases." Zielonka J., Bravo I.G., Marino D., Conrad E., Perkovic M., Battenberg M., Cichutek K., Muenk C. J. Virol. 83:7547-7559(2009) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN EIAV RESTRICTION. |
| [34] | "APOBEC3G: an intracellular centurion." Chiu Y.L., Greene W.C. Philos. Trans. R. Soc. Lond., B, Biol. Sci. 364:689-703(2009) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [35] | "APOBEC3F and APOBEC3G inhibit HIV-1 DNA integration by different mechanisms." Mbisa J.L., Bu W., Pathak V.K. J. Virol. 84:5250-5259(2010) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN HIV-1 RESTRICTION. |
| [36] | "Inhibition of xenotropic murine leukemia virus-related virus by APOBEC3 proteins and antiviral drugs." Paprotka T., Venkatachari N.J., Chaipan C., Burdick R., Delviks-Frankenberry K.A., Hu W.S., Pathak V.K. J. Virol. 84:5719-5729(2010) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN XMRV RESTRICTION. |
| [37] | "Quantitative profiling of the full APOBEC3 mRNA repertoire in lymphocytes and tissues: implications for HIV-1 restriction." Refsland E.W., Stenglein M.D., Shindo K., Albin J.S., Brown W.L., Harris R.S. Nucleic Acids Res. 38:4274-4284(2010) [PubMed] [Europe PMC] [Abstract] Cited for: TISSUE SPECIFICITY. |
| [38] | "APOBEC3G directly binds Hepatitis B virus core protein in cell and cell free systems." Zhao D., Wang X., Lou G., Peng G., Li J., Zhu H., Chen F., Li S., Liu D., Chen Z., Yang Z. Virus Res. 151:213-219(2010) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH HEPATITIS B VIRUS CAPSID PROTEIN. |
| [39] | "Phosphorylation directly regulates the intrinsic DNA cytidine deaminase activity of activation-induced deaminase and APOBEC3G protein." Demorest Z.L., Li M., Harris R.S. J. Biol. Chem. 286:26568-26575(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION AT THR-32 AND THR-218, SUBCELLULAR LOCATION, MUTAGENESIS OF THR-218. |
| [40] | "Structure-function analyses point to a polynucleotide-accommodating groove essential for APOBEC3A restriction activities." Bulliard Y., Narvaiza I., Bertero A., Peddi S., Roehrig U.F., Ortiz M., Zoete V., Castro-Diaz N., Turelli P., Telenti A., Michielin O., Weitzman M.D., Trono D. J. Virol. 85:1765-1776(2011) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN HOST DEFENSE, MUTAGENESIS OF GLU-217 AND PRO-247. |
| [41] | "Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1." Hultquist J.F., Lengyel J.A., Refsland E.W., LaRue R.S., Lackey L., Brown W.L., Harris R.S. J. Virol. 85:11220-11234(2011) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN HIV-1 RESTRICTION, SUBCELLULAR LOCATION, ENZYME REGULATION. |
| [42] | "APOBEC3G: a double agent in defense." Smith H.C. Trends Biochem. Sci. 36:239-244(2011) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [43] | "Functional analysis of the two cytidine deaminase domains in APOBEC3G." Li X., Ma J., Zhang Q., Zhou J., Yin X., Zhai C., You X., Yu L., Guo F., Zhao L., Li Z., Zeng Y., Cen S. Virology 414:130-136(2011) [PubMed] [Europe PMC] [Abstract] Cited for: DOMAIN CMP/DCMP DEAMINASE ZINC-BINDING. |
| [44] | "Antiviral mechanism and biochemical basis of the human APOBEC3 family." Imahashi M., Nakashima M., Iwatani Y. Front. Microbiol. 3:250-250(2012) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [45] | "Retroelements versus APOBEC3 family members: No great escape from the magnificent seven." Arias J.F., Koyama T., Kinomoto M., Tokunaga K. Front. Microbiol. 3:275-275(2012) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [46] | "APOBEC3G inhibits microRNA-mediated repression of translation by interfering with the interaction between Argonaute-2 and MOV10." Liu C., Zhang X., Huang F., Yang B., Li J., Liu B., Luo H., Zhang P., Zhang H. J. Biol. Chem. 287:29373-29383(2012) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH MOV10. |
| [47] | "The cellular antiviral protein APOBEC3G interacts with HIV-1 reverse transcriptase and inhibits its function during viral replication." Wang X., Ao Z., Chen L., Kobinger G., Peng J., Yao X. J. Virol. 86:3777-3786(2012) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH HIV-1 REVERSE TRANSCRIPTASE/RIBONUCLEASE H. |
| [48] | "HIV-1 replication and APOBEC3 antiviral activity are not regulated by P bodies." Phalora P.K., Sherer N.M., Wolinsky S.M., Swanson C.M., Malim M.H. J. Virol. 86:11712-11724(2012) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH EIF2C1; EIF2C2 AND EIF2C3. |
| [49] | "Endogenous origins of HIV-1 G-to-A hypermutation and restriction in the nonpermissive T cell line CEM2n." Refsland E.W., Hultquist J.F., Harris R.S. PLoS Pathog. 8:E1002800-E1002800(2012) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN HIV-1 RESTRICTION. |
| [50] | "Emerging complexities of APOBEC3G action on immunity and viral fitness during HIV infection and treatment." Monajemi M., Woodworth C.F., Benkaroun J., Grant M., Larijani M. Retrovirology 9:35-35(2012) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [51] | "Functions and regulation of the APOBEC family of proteins." Smith H.C., Bennett R.P., Kizilyer A., McDougall W.M., Prohaska K.M. Semin. Cell Dev. Biol. 23:258-268(2012) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [52] | "APOBEC3G restricts HIV-1 to a greater extent than APOBEC3F and APOBEC3DE in human primary CD4+ t cells and macrophages." Chaipan C., Smith J.L., Hu W.S., Pathak V.K. J. Virol. 87:444-453(2013) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN HIV-1 RESTRICTION. |
| [53] | "The suppression of HIV-1 infection by APOBEC3 proteins in primary human CD4+ T cells is associated with the inhibition of processive reverse transcription as well as excessive cytidine deamination." Gillick K., Pollpeter D., Phalora P., Kim E.Y., Wolinsky S.M., Malim M.H. J. Virol. 87:1508-1517(2013) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN HIV-1 RESTRICTION. |
| [54] | "Structure of the DNA deaminase domain of the HIV-1 restriction factor APOBEC3G." Chen K.M., Harjes E., Gross P.J., Fahmy A., Lu Y., Shindo K., Harris R.S., Matsuo H. Nature 452:116-119(2008) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY NMR OF 198-384 IN COMPLEX WITH ZINC, CATALYTIC ACTIVITY, FUNCTION, MUTAGENESIS OF ARG-213; ARG-215; GLU-259; TRP-285; ARG-313 AND ARG-320. |
| [55] | "Crystal structure of the anti-viral APOBEC3G catalytic domain and functional implications." Holden L.G., Prochnow C., Chang Y.P., Bransteitter R., Chelico L., Sen U., Stevens R.C., Goodman M.F., Chen X.S. Nature 456:121-124(2008) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 197-380 IN COMPLEX WITH ZINC, CATALYTIC ACTIVITY, MUTAGENESIS OF ARG-213; ARG-215; ASN-244; TRP-285 AND TYR-315. |
| [56] | "Structure, interaction and real-time monitoring of the enzymatic reaction of wild-type APOBEC3G." Furukawa A., Nagata T., Matsugami A., Habu Y., Sugiyama R., Hayashi F., Kobayashi N., Yokoyama S., Takaku H., Katahira M. EMBO J. 28:440-451(2009) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY NMR OF 193-384 IN COMPLEX WITH ZINC, CATALYTIC ACTIVITY. |
| [57] | "First-in-class small molecule inhibitors of the single-strand DNA cytosine deaminase APOBEC3G." Li M., Shandilya S.M., Carpenter M.A., Rathore A., Brown W.L., Perkins A.L., Harki D.A., Solberg J., Hook D.J., Pandey K.K., Parniak M.A., Johnson J.R., Krogan N.J., Somasundaran M., Ali A., Schiffer C.A., Harris R.S. ACS Chem. Biol. 7:506-517(2012) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.38 ANGSTROMS) OF 191-380. |
| + | Additional computationally mapped references. |
Web resources
| SeattleSNPs |
| Protein Spotlight Protein wars - Issue 45 of April 2004 |
Cross-references
Sequence databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AK022802 mRNA. No translation available. AK315650 mRNA. Translation: BAG38016.1. AF182420 mRNA. Translation: AAG14956.1. CR456472 mRNA. Translation: CAG30358.1. DQ147772 Genomic DNA. Translation: AAZ38722.1. AL022318 Genomic DNA. Translation: CAB45274.1. Sequence problems. AL078641, AL022318 Genomic DNA. Translation: CAI21556.1. AL022318, AL078641 Genomic DNA. Translation: CAI17900.1. CH471095 Genomic DNA. Translation: EAW60292.1. BC024268 mRNA. Translation: AAH24268.1. BC061914 mRNA. Translation: AAH61914.1. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IPI | IPI00396656. IPI00401132. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RefSeq | NP_001006667.1. NM_001006666.1. NP_068594.1. NM_021822.3. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| UniGene | Hs.659809. Hs.660143. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ProteinModelPortal | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DIP | DIP-37519N. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IntAct | Q9HC16. 2 interactions. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MINT | MINT-1428867. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| STRING | 9606.ENSP00000385057. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
PTM databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PhosphoSite | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Polymorphism databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DMDM | 44887683. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Proteomic databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PaxDb | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PRIDE | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DNASU | 200316. 60489. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Genome annotation databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl | ENST00000407997; ENSP00000385057; ENSG00000239713. ENST00000452957; ENSP00000413376; ENSG00000239713. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GeneID | 200316. 60489. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| KEGG | hsa:200316. hsa:60489. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| UCSC | uc003awx.3. human. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Organism-specific databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CTD | 200316. 60489. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GeneCards | GC22P039437. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HGNC | HGNC:17357. APOBEC3G. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HPA | HPA001812. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MIM | 607113. gene. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| neXtProt | NX_Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PharmGKB | PA24897. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| eggNOG | NOG135704. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOVERGEN | HBG050434. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InParanoid | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| KO | K01500. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| OMA | WDPDYQE. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| OrthoDB | EOG480HX1. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PhylomeDB | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| BRENDA | 3.5.4.5. 2681. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Reactome | REACT_116125. Disease. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene expression databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ArrayExpress | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Bgee | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CleanEx | HS_APOBEC3G. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Genevestigator | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GermOnline | ENSG00000128394. Homo sapiens. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InterPro | IPR016192. APOBEC/CMP_deaminase_Zn-bd. IPR013158. APOBEC_N. IPR016193. Cytidine_deaminase-like. [Graphical view] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Pfam | PF08210. APOBEC_N. 2 hits. [Graphical view] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SUPFAM | SSF53927. Cytidine_deaminase-like. 1 hit. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PROSITE | PS00903. CYT_DCMP_DEAMINASES. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Other | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| BindingDB | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ChEMBL | CHEMBL1741217. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ChiTaRS | APOBEC3G. human. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| EvolutionaryTrace | Q9HC16. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NextBio | 65375. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Entry information
| Entry name | ABC3G_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9HC16 Secondary accession number(s): B2RDR9 Q9H9H8 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 22 Human chromosome 22: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |
| Protein Spotlight Protein Spotlight articles and cited UniProtKB/Swiss-Prot entries |

Clusters with
