##gff-version 3 Q9HBG7 UniProtKB Signal peptide 1 47 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Chain 48 655 . . . ID=PRO_0000014851;Note=T-lymphocyte surface antigen Ly-9 Q9HBG7 UniProtKB Topological domain 48 454 . . . Note=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Transmembrane 455 476 . . . Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Topological domain 477 655 . . . Note=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Domain 48 158 . . . Note=Ig-like V-type 1 Q9HBG7 UniProtKB Domain 159 235 . . . Note=Ig-like C2-type 1 Q9HBG7 UniProtKB Domain 251 363 . . . Note=Ig-like V-type 2 Q9HBG7 UniProtKB Domain 364 452 . . . Note=Ig-like C2-type 2 Q9HBG7 UniProtKB Region 521 556 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q9HBG7 UniProtKB Region 633 655 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q9HBG7 UniProtKB Motif 601 606 . . . Note=ITSM 1;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q13291 Q9HBG7 UniProtKB Motif 624 629 . . . Note=ITSM 2;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q13291 Q9HBG7 UniProtKB Compositional bias 525 539 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q9HBG7 UniProtKB Compositional bias 542 556 . . . Note=Basic and acidic residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q9HBG7 UniProtKB Modified residue 603 603 . . . Note=Phosphotyrosine;Ontology_term=ECO:0000305,ECO:0000305;evidence=ECO:0000305|PubMed:12458214,ECO:0000305|PubMed:26221972;Dbxref=PMID:12458214,PMID:26221972 Q9HBG7 UniProtKB Glycosylation 68 68 . . . Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Glycosylation 95 95 . . . Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Glycosylation 120 120 . . . Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Glycosylation 169 169 . . . Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Glycosylation 173 173 . . . Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Glycosylation 285 285 . . . Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:19349973;Dbxref=PMID:19349973 Q9HBG7 UniProtKB Glycosylation 413 413 . . . Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Glycosylation 424 424 . . . Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9HBG7 UniProtKB Disulfide bond 172 242 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00114 Q9HBG7 UniProtKB Disulfide bond 178 222 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00114 Q9HBG7 UniProtKB Disulfide bond 377 446 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00114 Q9HBG7 UniProtKB Disulfide bond 383 427 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00114 Q9HBG7 UniProtKB Alternative sequence 152 193 . . . ID=VSP_043328;Note=In isoform 4. EQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSWTP->APFIEKLSVHVIEGDHRTLLEGSGLESIISTLAEPRVSVREG;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334 Q9HBG7 UniProtKB Alternative sequence 359 448 . . . ID=VSP_002524;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|Ref.7 Q9HBG7 UniProtKB Alternative sequence 500 513 . . . ID=VSP_002525;Note=In isoform 2 and isoform 3. Missing;Ontology_term=ECO:0000303,ECO:0000303;evidence=ECO:0000303|PubMed:8537117,ECO:0000303|Ref.7;Dbxref=PMID:8537117 Q9HBG7 UniProtKB Alternative sequence 524 554 . . . ID=VSP_002526;Note=In isoform 3. PARQQPTPTSDSSSDSNLTTEEDEDRPEVHK->Q;Ontology_term=ECO:0000303;evidence=ECO:0000303|Ref.7 Q9HBG7 UniProtKB Natural variant 602 602 . . . ID=VAR_033612;Note=Decreases interaction with SH2D1A and INPP5D 2-fold%2C reduced T-cell response. M->V;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10970093,ECO:0000269|PubMed:26221972,ECO:0000269|PubMed:8537117;Dbxref=dbSNP:rs509749,PMID:10970093,PMID:26221972,PMID:8537117 Q9HBG7 UniProtKB Sequence conflict 171 171 . . . Note=Missing;Ontology_term=ECO:0000305;evidence=ECO:0000305