Q9HAF1 (EAF6_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 88.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Chromatin modification-related protein MEAF6 Short name=MYST/Esa1-associated factor 6 Alternative name(s): Esa1-associated factor 6 homolog Short name=Protein EAF6 homolog Short name=hEAF6 Sarcoma antigen NY-SAR-91 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 191 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histone H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. Component of the HBO1 complex which has a histone H4-specific acetyltransferase activity, a reduced activity toward histone H3 and is responsible for the bulk of histone H4 acetylation in vivo. Component of the MOZ/MORF complex which has a histone H3 acetyltransferase activity. Ref.8 Ref.10 Ref.12 |
| Subunit structure | Component of the NuA4 histone acetyltransferase complex which contains the catalytic subunit KAT5 and the subunits EP400, TRRAP, BRD8, EPC1, DMAP1, RUVBL1, RUVBL2, ING3, actin, ACTL6A, MORF4L1, MORF4L2, MRGBP, YEATS4, VPS72 and MEAF6. Component of the HBO1 complex composed at least of ING4 or ING5, KAT7/HBO1, MEAF6, and one of PHF15, PHF16 and PHF17. Component of the MOZ/MORF complex composed at least of ING5, KAT6A, KAT6B, MEAF6 and one of BRPF1, BRD1/BRPF2 and BRPF3. Ref.7 Ref.8 Ref.9 Ref.10 Ref.12 |
| Subcellular location | |
| Involvement in disease | A chromosomal aberration involving MEAF6 may be a cause of endometrial stromal tumors. Translocation t(1;6)(p34;p21) with PHF1. Ref.17 |
| Sequence similarities | Belongs to the EAF6 family. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| FXR2 | P51116 | 3 | EBI-399266,EBI-740459 |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9HAF1-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9HAF1-2) The sequence of this isoform differs from the canonical sequence as follows: 178-191: RIDLKLNKKPRADY → SPSGMFDYDFEYVY | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q9HAF1-3) The sequence of this isoform differs from the canonical sequence as follows: 178-178: R → SPSGMFDYDFE | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 191 | 191 | Chromatin modification-related protein MEAF6 | PRO_0000272609 | |||||
Regions | |||||||||
| Coiled coil | 11 – 47 | 37 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 69 | 1 | N6-acetyllysine Ref.14 | ||||||
| Modified residue | 74 | 1 | N6-acetyllysine Ref.14 | ||||||
| Modified residue | 118 | 1 | Phosphoserine Ref.13 | ||||||
| Modified residue | 120 | 1 | Phosphothreonine Ref.13 | ||||||
Natural variations | |||||||||
| Alternative sequence | 178 – 191 | 14 | RIDLK…PRADY → SPSGMFDYDFEYVY in isoform 2. | VSP_022450 | |||||
| Alternative sequence | 178 | 1 | R → SPSGMFDYDFE in isoform 3. | VSP_022451 | |||||
Experimental info | |||||||||
| Sequence conflict | 2 – 3 | 2 | AM → RG in AAO65179. Ref.6 | ||||||
| Sequence conflict | 4 | 1 | H → P in AAZ13760. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Cerebellum and Fetal brain. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Embryo. |
| [3] | Lin L., Nong W., Zhou G., Ke R., Shen C., Zhong G., Zheng Z., Liang M., Li M., Li H., Yang S. Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). |
| [4] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Brain and Uterus. |
| [6] | "Immunomic analysis of human sarcoma." Lee S.-Y., Obata Y., Yoshida M., Stockert E., Williamson B., Jungbluth A.A., Chen Y.-T., Old L.J., Scanlan M.J. Proc. Natl. Acad. Sci. U.S.A. 100:2651-2656(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 2-191 (ISOFORM 1). |
| [7] | "Identification of new subunits of the multiprotein mammalian TRRAP/TIP60-containing histone acetyltransferase complex." Cai Y., Jin J., Tomomori-Sato C., Sato S., Sorokina I., Parmely T.J., Conaway R.C., Conaway J.W. J. Biol. Chem. 278:42733-42736(2003) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY, IDENTIFICATION IN THE NUA4 HISTONE ACETYLTRANSFERASE COMPLEX. |
| [8] | "Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans." Doyon Y., Selleck W., Lane W.S., Tan S., Cote J. Mol. Cell. Biol. 24:1884-1896(2004) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, IDENTIFICATION BY MASS SPECTROMETRY, IDENTIFICATION IN THE NUA4 HISTONE ACETYLTRANSFERASE COMPLEX. |
| [9] | "The mammalian YL1 protein is a shared subunit of the TRRAP/TIP60 histone acetyltransferase and SRCAP complexes." Cai Y., Jin J., Florens L., Swanson S.K., Kusch T., Li B., Workman J.L., Washburn M.P., Conaway R.C., Conaway J.W. J. Biol. Chem. 280:13665-13670(2005) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY, IDENTIFICATION IN THE NUA4 HISTONE ACETYLTRANSFERASE COMPLEX. |
| [10] | "ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation." Doyon Y., Cayrou C., Ullah M., Landry A.-J., Cote V., Selleck W., Lane W.S., Tan S., Yang X.-J., Cote J. Mol. Cell 21:51-64(2006) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, IDENTIFICATION BY MASS SPECTROMETRY, IDENTIFICATION IN THE NUA4 HISTONE ACETYLTRANSFERASE COMPLEX, IDENTIFICATION IN THE HBO1 COMPLEX, IDENTIFICATION IN THE MOZ/MORF COMPLEX. |
| [11] | "ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage." Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J. Science 316:1160-1166(2007) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Embryonic kidney. |
| [12] | "Molecular architecture of quartet MOZ/MORF histone acetyltransferase complexes." Ullah M., Pelletier N., Xiao L., Zhao S.P., Wang K., Degerny C., Tahmasebi S., Cayrou C., Doyon Y., Goh S.-L., Champagne N., Cote J., Yang X.-J. Mol. Cell. Biol. 28:6828-6843(2008) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, IDENTIFICATION IN THE MOZ/MORF COMPLEX, INTERACTION WITH BRPF1, SUBCELLULAR LOCATION. |
| [13] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-118 AND THR-120, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [14] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-69 AND LYS-74, MASS SPECTROMETRY. |
| [15] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [16] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [17] | "Novel fusion of MYST/Esa1-associated factor 6 and PHF1 in endometrial stromal sarcoma." Panagopoulos I., Micci F., Thorsen J., Gorunova L., Eibak A.M., Bjerkehagen B., Davidson B., Heim S. PLoS ONE 7:E39354-E39354(2012) [PubMed] [Europe PMC] [Abstract] Cited for: DISEASE, CHROMOSOMAL TRANSLOCATION WITH PHF1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BX538212 mRNA. Translation: CAD98071.1. BX640719 mRNA. Translation: CAE45838.1. AK021792 mRNA. Translation: BAB13898.1. DQ099384 mRNA. Translation: AAZ13760.1. AL034379 Genomic DNA. Translation: CAI20549.1. AL034379 Genomic DNA. Translation: CAI20550.1. BC056406 mRNA. Translation: AAH56406.1. BC016328 mRNA. Translation: AAH16328.1. AY211926 mRNA. Translation: AAO65179.1. |
| IPI | IPI00009373. IPI00642467. IPI00828199. |
| RefSeq | NP_001257804.1. NM_001270875.1. NP_073593.2. NM_022756.5. |
| UniGene | Hs.17118. |
3D structure databases | |
| ProteinModelPortal | Q9HAF1. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9HAF1. 7 interactions. |
| STRING | 9606.ENSP00000362166. |
PTM databases | |
| PhosphoSite | Q9HAF1. |
Polymorphism databases | |
| DMDM | 74752760. |
Proteomic databases | |
| PaxDb | Q9HAF1. |
| PRIDE | Q9HAF1. |
Protocols and materials databases | |
| DNASU | 64769. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000296214; ENSP00000296214; ENSG00000163875. ENST00000373075; ENSP00000362166; ENSG00000163875. ENST00000448519; ENSP00000394966; ENSG00000163875. |
| GeneID | 64769. |
| KEGG | hsa:64769. |
| UCSC | uc001cbe.1. human. uc001cbg.1. human. uc001cbh.1. human. |
Organism-specific databases | |
| CTD | 64769. |
| GeneCards | GC01M037951. |
| HGNC | HGNC:25674. MEAF6. |
| HPA | HPA029599. HPA029600. |
| MIM | 611001. gene. |
| neXtProt | NX_Q9HAF1. |
| PharmGKB | PA165751536. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG290756. |
| HOGENOM | HOG000290166. |
| KO | K11344. |
| OMA | SHHGSHK. |
Gene expression databases | |
| ArrayExpress | Q9HAF1. |
| Bgee | Q9HAF1. |
| CleanEx | HS_C1orf149. |
| Genevestigator | Q9HAF1. |
Family and domain databases | |
| InterPro | IPR015418. Hist_AcTrfase_NuA4_cplx. [Graphical view] |
| Pfam | PF09340. NuA4. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 64769. |
| NextBio | 66769. |
| SOURCE | Search... |
Entry information
| Entry name | EAF6_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9HAF1 Secondary accession number(s): Q4F967, Q7Z311, Q86WE3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
