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Protein
Submitted name:

cDNA FLJ12657 fis, clone NT2RM4002140

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

SignaLinkiQ9H9M3.

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ12657 fis, clone NT2RM4002140Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA37362.

PTM / Processingi

Proteomic databases

PaxDbiQ9H9M3.
PeptideAtlasiQ9H9M3.

Expressioni

Gene expression databases

GenevisibleiQ9H9M3. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000378857.

Structurei

3D structure databases

ProteinModelPortaliQ9H9M3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0974. Eukaryota.
ENOG410ZJ6J. LUCA.
HOVERGENiHBG071036.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 1 hit.
[Graphical view]
SMARTiSM00320. WD40. 3 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 3 hits.

Sequencei

Sequence statusi: Complete.

Q9H9M3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNWLAGLRIV PDGSMVILGF HANEFVVWNP RSHEKLHIVN CGGGHRSWAF
60 70 80 90 100
SDTEAAMAFA YLKDGDVMLY RALGGCTRPH VILREGLHGR EITCVKRVGT
110 120 130 140 150
ITLGPEYGVP SFMQPDDLEP GSEGPDLTDI VITCSEDTTV CVLALPTTTG
160 170 180 190 200
SAHALTAVCN HISSVRAVAV WGIGTPGGPQ DPQPGLTAHV VSAGGRAEMH
210 220 230 240 250
CFSIMVTPDP STPSRLACHV MHLSSHRLDE YWDRQRNRHR MVKVDPETRY
260 270 280 290 300
MSLAVCELDQ PGLGPLVAAA CSDGAVRLFL LQDSGRILQL LAETFHHKRC
310 320 330 340 350
VLKVHSFTHE APNQRRRLLL CSAATDGSLA FWDLTTMLDH DSTVLEPPVD
360 370 380 390 400
PGLPYRLGTP SLTLQAHSCG INSLHTLPTR EGHHLVASGS EDGSLHVFVL
410 420 430 440 450
AVEMLQLEEA VGEAGLVPQL RVLEEYSVPC AHAAHVTGLK ILSPSIMVSA
460 470 480 490 500
SIDQRLTFWR LGHGEPTFMN STVFHVPDVA DMDCWPVSPE FGHRCALGGR

GLEVYNWYD
Length:509
Mass (Da):55,514
Last modified:March 1, 2001 - v1
Checksum:i3B76D0D3CBCDE55C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK022719 mRNA. Translation: BAB14201.1.
RefSeqiNP_001307475.1. NM_001320546.1.
NP_001307476.1. NM_001320547.1.
NP_060501.3. NM_018031.4.
UniGeneiHs.654815.

Genome annotation databases

GeneIDi11180.
KEGGihsa:11180.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK022719 mRNA. Translation: BAB14201.1.
RefSeqiNP_001307475.1. NM_001320546.1.
NP_001307476.1. NM_001320547.1.
NP_060501.3. NM_018031.4.
UniGeneiHs.654815.

3D structure databases

ProteinModelPortaliQ9H9M3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000378857.

Proteomic databases

PaxDbiQ9H9M3.
PeptideAtlasiQ9H9M3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi11180.
KEGGihsa:11180.

Organism-specific databases

CTDi11180.
PharmGKBiPA37362.

Phylogenomic databases

eggNOGiKOG0974. Eukaryota.
ENOG410ZJ6J. LUCA.
HOVERGENiHBG071036.

Enzyme and pathway databases

SignaLinkiQ9H9M3.

Miscellaneous databases

GenomeRNAii11180.

Gene expression databases

GenevisibleiQ9H9M3. HS.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 1 hit.
[Graphical view]
SMARTiSM00320. WD40. 3 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 3 hits.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ9H9M3_HUMAN
AccessioniPrimary (citable) accession number: Q9H9M3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: July 6, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.