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Protein

Protein FAM204A

Gene

FAM204A

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM204A
Gene namesi
Name:FAM204A
Synonyms:C10orf84
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 10

Organism-specific databases

HGNCiHGNC:25794. FAM204A.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134910767.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 233233Protein FAM204APRO_0000089808Add
BLAST

Proteomic databases

MaxQBiQ9H8W3.
PaxDbiQ9H8W3.
PRIDEiQ9H8W3.

PTM databases

PhosphoSiteiQ9H8W3.

Expressioni

Gene expression databases

BgeeiQ9H8W3.
CleanExiHS_C10orf84.
ExpressionAtlasiQ9H8W3. baseline and differential.
GenevestigatoriQ9H8W3.

Organism-specific databases

HPAiHPA038182.

Interactioni

Protein-protein interaction databases

BioGridi121970. 3 interactions.
IntActiQ9H8W3. 1 interaction.
MINTiMINT-8417609.

Structurei

3D structure databases

ProteinModelPortaliQ9H8W3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili144 – 16421Sequence AnalysisAdd
BLAST

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiNOG43173.
GeneTreeiENSGT00390000008978.
HOGENOMiHOG000111693.
HOVERGENiHBG050968.
InParanoidiQ9H8W3.
OMAiIACHNFV.
OrthoDBiEOG7QNVNR.
PhylomeDBiQ9H8W3.
TreeFamiTF328607.

Sequencei

Sequence statusi: Complete.

Q9H8W3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MWSGLLPPGL NESDAESNSE DEATLENSGL NLQEDKEDES IRKTEIIDFS
60 70 80 90 100
TDEPKTETES NVNAYEECPS GIPIDMWNKF QELHKKHSEQ KSTTSRFRGK
110 120 130 140 150
RRKRSRKDKL KNEKELHSEP SSNETQWKEL TQYFGVNDRF DPPVKRKKVE
160 170 180 190 200
KSGLEKRIDQ AVEEWNIEKA EELSNQLATR ELGVKIAKAV ACHNFVKAKK
210 220 230
EVENSQAARK KKKLAWGFEA KKRWETKSNM GYM
Length:233
Mass (Da):27,021
Last modified:March 1, 2001 - v1
Checksum:i53F9EA7A560F70FB
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti68 – 681C → F in BAB15514. (PubMed:14702039)Curated
Sequence conflicti84 – 841H → R in BAB15514. (PubMed:14702039)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK023250 mRNA. Translation: BAB14487.1.
AK026630 mRNA. Translation: BAB15514.1.
AL365498 Genomic DNA. Translation: CAI13373.1.
CH471066 Genomic DNA. Translation: EAW49417.1.
CH471066 Genomic DNA. Translation: EAW49418.1.
BC023577 mRNA. Translation: AAH23577.1.
CCDSiCCDS7605.1.
RefSeqiNP_001128144.1. NM_001134672.1.
NP_071346.1. NM_022063.2.
XP_006718002.1. XM_006717939.1.
UniGeneiHs.105575.
Hs.372309.

Genome annotation databases

EnsembliENST00000369172; ENSP00000358170; ENSG00000165669.
ENST00000369183; ENSP00000358183; ENSG00000165669.
GeneIDi63877.
KEGGihsa:63877.
UCSCiuc001ldo.2. human.

Polymorphism databases

DMDMi50400654.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK023250 mRNA. Translation: BAB14487.1.
AK026630 mRNA. Translation: BAB15514.1.
AL365498 Genomic DNA. Translation: CAI13373.1.
CH471066 Genomic DNA. Translation: EAW49417.1.
CH471066 Genomic DNA. Translation: EAW49418.1.
BC023577 mRNA. Translation: AAH23577.1.
CCDSiCCDS7605.1.
RefSeqiNP_001128144.1. NM_001134672.1.
NP_071346.1. NM_022063.2.
XP_006718002.1. XM_006717939.1.
UniGeneiHs.105575.
Hs.372309.

3D structure databases

ProteinModelPortaliQ9H8W3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi121970. 3 interactions.
IntActiQ9H8W3. 1 interaction.
MINTiMINT-8417609.

PTM databases

PhosphoSiteiQ9H8W3.

Polymorphism databases

DMDMi50400654.

Proteomic databases

MaxQBiQ9H8W3.
PaxDbiQ9H8W3.
PRIDEiQ9H8W3.

Protocols and materials databases

DNASUi63877.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000369172; ENSP00000358170; ENSG00000165669.
ENST00000369183; ENSP00000358183; ENSG00000165669.
GeneIDi63877.
KEGGihsa:63877.
UCSCiuc001ldo.2. human.

Organism-specific databases

CTDi63877.
GeneCardsiGC10M120065.
HGNCiHGNC:25794. FAM204A.
HPAiHPA038182.
neXtProtiNX_Q9H8W3.
PharmGKBiPA134910767.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG43173.
GeneTreeiENSGT00390000008978.
HOGENOMiHOG000111693.
HOVERGENiHBG050968.
InParanoidiQ9H8W3.
OMAiIACHNFV.
OrthoDBiEOG7QNVNR.
PhylomeDBiQ9H8W3.
TreeFamiTF328607.

Miscellaneous databases

ChiTaRSiFAM204A. human.
GenomeRNAii63877.
NextBioi65564.
PROiQ9H8W3.

Gene expression databases

BgeeiQ9H8W3.
CleanExiHS_C10orf84.
ExpressionAtlasiQ9H8W3. baseline and differential.
GenevestigatoriQ9H8W3.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  2. "The DNA sequence and comparative analysis of human chromosome 10."
    Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J.
    , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R.M., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
    Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: B-cell.

Entry informationi

Entry nameiF204A_HUMAN
AccessioniPrimary (citable) accession number: Q9H8W3
Secondary accession number(s): D3DRC6, Q5T373, Q9H5V5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: March 1, 2001
Last modified: January 7, 2015
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 10
    Human chromosome 10: entries, gene names and cross-references to MIM

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.