Reviewed,
UniProtKB/Swiss-Prot Q9H8L6 (MMRN2_HUMAN)
Last modified
October 13, 2009.
Version 72.
History...
Clusters with 100%,
90%,
50% identity |
Documents (5) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Multimerin-2 Alternative name(s): EMILIN-3 Elastin microfibril interface located protein 3 Short name=Elastin microfibril interfacer 3 EndoGlyx-1 p125/p140 subunit | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 949 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Subunit structure | Heteromer of p110, p125, p140 and p200 subunits; disulfide-linked. Ref.1 |
| Subcellular location | Secreted › extracellular space › extracellular matrix. Ref.1 |
| Tissue specificity | Endothelium. Ref.1 |
| Post-translational modification | N- and O-glycosylated. Ref.4 |
| Sequence similarities | Contains 1 C1q domain. Contains 1 EMI domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Extracellular matrix Secreted |
| Coding sequence diversity | Polymorphism |
| Domain | Coiled coil Signal |
| PTM | Disulfide bond Glycoprotein |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | extracellular space Ref.1 Inferred from expression pattern. Source: UniProtKB |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 22 | 22 | Potential | ||||||||
| Chain | 23 – 949 | 927 | Multimerin-2 | PRO_0000007822 | |||||||
Regions | |||||||||||
| Domain | 54 – 132 | 79 | EMI | ||||||||
| Domain | 821 – 949 | 129 | C1q | ||||||||
| Coiled coil | 167 – 187 | 21 | Potential | ||||||||
| Coiled coil | 292 – 487 | 196 | Potential | ||||||||
| Coiled coil | 547 – 596 | 50 | Potential | ||||||||
| Coiled coil | 688 – 711 | 24 | Potential | ||||||||
| Compositional bias | 779 – 806 | 28 | Arg/Asp/Glu/Lys-rich (highly charged) | ||||||||
Amino acid modifications | |||||||||||
| Glycosylation | 205 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 214 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 249 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 261 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 350 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 379 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 439 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 472 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 727 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 765 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 845 | 1 | N-linked (GlcNAc...) Ref.4 | ||||||||
| Disulfide bond | 58 ↔ 122 | By similarity | |||||||||
| Disulfide bond | 85 ↔ 92 | By similarity | |||||||||
| Disulfide bond | 121 ↔ 130 | By similarity | |||||||||
Natural variations | |||||||||||
| Natural variant | 49 | 1 | S → G: dbSNP rs3750823. Ref.3 | VAR_019801 | |||||||
| Natural variant | 448 | 1 | V → M in a colorectal cancer sample; somatic mutation. Ref.5 | VAR_036362 | |||||||
| Natural variant | 731 | 1 | D → H: dbSNP rs4934281. | VAR_019802 | |||||||
| Natural variant | 831 | 1 | S → R: dbSNP rs36073867. | VAR_053076 | |||||||
| Natural variant | 910 | 1 | V → L: dbSNP rs34587013. | VAR_053077 | |||||||
Experimental info | |||||||||||
| Sequence conflict | 270 | 1 | R → H in AAH64415. Ref.1 | ||||||||
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Molecular cloning and characterization of EndoGlyx-1, an EMILIN-like multisubunit glycoprotein of vascular endothelium." Christian S., Ahorn H., Novatchkova M., Garin-Chesa P., Park J.E., Weber G., Eisenhaber F., Rettig W.J., Lenter M.C. J. Biol. Chem. 276:48588-48595(2001) [PubMed: 11559704] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], SUBUNIT, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, MASS SPECTROMETRY. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Placenta. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT GLY-49. Tissue: Placenta. |
| [4] | "Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry." Liu T., Qian W.-J., Gritsenko M.A., Camp D.G. II, Monroe M.E., Moore R.J., Smith R.D. J. Proteome Res. 4:2070-2080(2005) [PubMed: 16335952] [Abstract] Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-845, MASS SPECTROMETRY. Tissue: Plasma. |
| [5] | "The consensus coding sequences of human breast and colorectal cancers." Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. Velculescu V.E.Science 314:268-274(2006) [PubMed: 16959974] [Abstract] Cited for: VARIANT [LARGE SCALE ANALYSIS] MET-448. |
Cross-references
Sequence databases | |
|---|---|
| AK023527 mRNA. Translation: BAB14599.1. BC064415 mRNA. Translation: AAH64415.1. BC094744 mRNA. Translation: AAH94744.1. | |
| IPI | IPI00015525. |
| RefSeq | NP_079032.2. |
| UniGene | Hs.524479 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q9H8L6. |
Proteomic databases | |
| PRIDE | Q9H8L6. |
Genome annotation databases | |
| Ensembl | ENST00000372027; ENSP00000361097; ENSG00000173269; Homo sapiens. [Genome view] ENST00000443699; ENSP00000400043; ENSG00000173269; Homo sapiens. [Genome view] |
| GeneID | 79812. |
| KEGG | hsa:79812. |
| UCSC | uc001kea.1. human. |
Organism-specific databases | |
| CTD | 79812. |
| GeneCards | GC10M088685. |
| H-InvDB | HIX0008998. |
| HGNC | HGNC:19888. MMRN2. |
| HPA | HPA020741. |
| MIM | 608925. gene. |
| PharmGKB | PA134991578. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | Q9H8L6. |
| HOVERGEN | Q9H8L6. |
Gene expression databases | |
| ArrayExpress | Q9H8L6. |
| Bgee | Q9H8L6. |
| CleanEx | HS_EMILIN3. HS_MMRN2. |
| Genevestigator | Q9H8L6. |
| GermOnline | ENSG00000173269. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR001073. C1q. IPR011489. EMI_domain. IPR008983. Tumour_necrosis_fac-like. [Graphical view] |
| Gene3D | G3DSA:2.60.120.40. Tumour_necrosis_fac-like. 1 hit. |
| Pfam | PF00386. C1q. 1 hit. PF07546. EMI. 1 hit. [Graphical view] |
| PRINTS | PR00007. COMPLEMNTC1Q. |
| PROSITE | PS50871. C1Q. 1 hit. PS51041. EMI. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 69406. |
| SOURCE | Search... |
Entry information
| Entry name | MMRN2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9H8L6 Secondary accession number(s): Q504V7, Q6P2N2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 10 Human chromosome 10: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


