Q9H8E8 (CSR2B_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 108.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Cysteine-rich protein 2-binding protein Short name=CSRP2-binding protein Alternative name(s): ADA2A-containing complex subunit 2 Short name=ATAC2 CRP2-binding partner Short name=CRP2BP | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 782 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4. May function as a scaffold for the ATAC complex to promote ATAC complex stability. Has also weak histone acetyltransferase activity toward histone H4. Required for the normal progression through G1 and G2/M phases of the cell cycle. Ref.7 |
| Subunit structure | Interacts with the LIM 1 domain of CSRP2. Component of the ADA2A-containing complex (ATAC), composed of CSRP2BP, KAT2A, TADA2L, TADA3L, ZZ3, MBIP, WDR5, YEATS2, CCDC101 and DR1. In the complex, it probably interacts directly with KAT2A, MBIP and WDR5. Ref.5 Ref.7 |
| Subcellular location | |
| Tissue specificity | Expressed in skeletal muscle, heart, lung, placenta, brain, liver, pancreas and kidney. High expression in skeletal muscle and heart. Lower expression in lung. |
| Sequence similarities | Contains 1 N-acetyltransferase domain. |
| Sequence caution | The sequence CAB56651.2 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| PTM | Acetylation |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | cell cycle process Inferred from electronic annotation. Source: Compara embryo developmentInferred from electronic annotation. Source: Compara histone H3 acetylationInferred from direct assay PubMed 18838386. Source: BHF-UCL |
| Cellular_component | Ada2/Gcn5/Ada3 transcription activator complex Inferred from direct assay PubMed 18838386. Source: BHF-UCL cytoplasmInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | LIM domain binding Non-traceable author statement Ref.5. Source: UniProtKB histone acetyltransferase activityInferred from direct assay Ref.7. Source: MGI |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| MBIP | Q9NS73 | 3 | EBI-750907,EBI-741953 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9H8E8-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9H8E8-2) The sequence of this isoform differs from the canonical sequence as follows: 1-128: Missing. | ||||||
| Note: May be due to an intron retention. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 782 | 782 | Cysteine-rich protein 2-binding protein | PRO_0000074603 | |||||
Regions | |||||||||
| Domain | 638 – 782 | 145 | N-acetyltransferase | ||||||
Amino acid modifications | |||||||||
| Modified residue | 292 | 1 | N6-acetyllysine Ref.8 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 128 | 128 | Missing in isoform 2. | VSP_000070 | |||||
| Natural variant | 214 | 1 | P → L. Corresponds to variant rs6081011 [ dbSNP | Ensembl ]. | VAR_028034 | |||||
| Natural variant | 400 | 1 | V → G. Ref.1 Ref.4 Corresponds to variant rs1205193 [ dbSNP | Ensembl ]. | VAR_028035 | |||||
| Natural variant | 442 | 1 | R → T. Corresponds to variant rs2295182 [ dbSNP | Ensembl ]. | VAR_020466 | |||||
| Natural variant | 600 | 1 | P → R. Corresponds to variant rs11557577 [ dbSNP | Ensembl ]. | VAR_033839 | |||||
| Natural variant | 738 | 1 | A → S. Corresponds to variant rs6081027 [ dbSNP | Ensembl ]. | VAR_048166 | |||||
Experimental info | |||||||||
| Sequence conflict | 535 | 1 | R → G in BAB14669. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), VARIANT GLY-400. Tissue: Placenta. |
| [2] | "The DNA sequence and comparative analysis of human chromosome 20." Deloukas P., Matthews L.H., Ashurst J.L., Burton J., Gilbert J.G.R., Jones M., Stavrides G., Almeida J.P., Babbage A.K., Bagguley C.L., Bailey J., Barlow K.F., Bates K.N., Beard L.M., Beare D.M., Beasley O.P., Bird C.P., Blakey S.E. Rogers J.Nature 414:865-871(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2), VARIANT GLY-400. Tissue: Eye and Placenta. |
| [5] | "The cysteine- and glycine-rich LIM domain protein CRP2 specifically interacts with a novel human protein." Weiskirchen R., Gressner A.M. Biochem. Biophys. Res. Commun. 274:655-663(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 546-782, INTERACTION WITH CSRP2. Tissue: Kidney. |
| [6] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [7] | "The double-histone-acetyltransferase complex ATAC is essential for mammalian development." Guelman S., Kozuka K., Mao Y., Pham V., Solloway M.J., Wang J., Wu J., Lill J.R., Zha J. Mol. Cell. Biol. 29:1176-1188(2009) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, IDENTIFICATION IN ATAC COMPLEX. |
| [8] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-292, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AK023759 mRNA. Translation: BAB14669.1. AL050321 Genomic DNA. Translation: CAB56651.2. Sequence problems. AL050321 Genomic DNA. Translation: CAM28294.1. CH471133 Genomic DNA. Translation: EAX10255.1. BC007537 mRNA. Translation: AAH07537.1. BC009174 mRNA. No translation available. AF252257 mRNA. Translation: AAG10249.1. |
| IPI | IPI00063635. IPI00218147. |
| RefSeq | NP_065397.3. NM_020536.4. |
| UniGene | Hs.488051. Hs.728790. |
3D structure databases | |
| ProteinModelPortal | Q9H8E8. |
| SMR | Q9H8E8. Positions 672-758. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9H8E8. 2 interactions. |
| MINT | MINT-1479938. |
| STRING | 9606.ENSP00000278816. |
PTM databases | |
| PhosphoSite | Q9H8E8. |
Polymorphism databases | |
| DMDM | 308153608. |
Proteomic databases | |
| PaxDb | Q9H8E8. |
| PRIDE | Q9H8E8. |
Protocols and materials databases | |
| DNASU | 57325. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000278816; ENSP00000278816; ENSG00000149474. ENST00000377681; ENSP00000366909; ENSG00000149474. ENST00000435364; ENSP00000392318; ENSG00000149474. ENST00000489634; ENSP00000425909; ENSG00000149474. |
| GeneID | 57325. |
| KEGG | hsa:57325. |
| UCSC | uc002wqk.3. human. |
Organism-specific databases | |
| CTD | 57325. |
| GeneCards | GC20P018066. |
| HGNC | HGNC:15904. CSRP2BP. |
| HPA | CAB034224. |
| neXtProt | NX_Q9H8E8. |
| PharmGKB | PA26969. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG295186. |
| HOGENOM | HOG000230880. |
| HOVERGEN | HBG051142. |
| InParanoid | Q9H8E8. |
| OMA | KEDICAF. |
| OrthoDB | EOG4XSKPB. |
| PhylomeDB | Q9H8E8. |
Gene expression databases | |
| ArrayExpress | Q9H8E8. |
| Bgee | Q9H8E8. |
| CleanEx | HS_CSRP2BP. |
| Genevestigator | Q9H8E8. |
| GermOnline | ENSG00000149474. Homo sapiens. |
Family and domain databases | |
| Gene3D | 3.40.630.30. 1 hit. |
| InterPro | IPR016181. Acyl_CoA_acyltransferase. IPR000182. GNAT_dom. [Graphical view] |
| Pfam | PF00583. Acetyltransf_1. 1 hit. [Graphical view] |
| SUPFAM | SSF55729. Acyl_CoA_acyltransferase. 1 hit. |
| PROSITE | PS51186. GNAT. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 57325. |
| NextBio | 63428. |
Entry information
| Entry name | CSR2B_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9H8E8 Secondary accession number(s): A2A2I5 Q9UIY5 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 20 Human chromosome 20: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with
