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Protein

Cytosolic Fe-S cluster assembly factor NARFL

Gene

NARFL

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Seems to negatively regulate the level of HIF1A expression, although this effect could be indirect.2 Publications

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi24 – 241Iron-sulfur 1 (4Fe-4S)Sequence Analysis
Metal bindingi71 – 711Iron-sulfur 1 (4Fe-4S)Sequence Analysis
Metal bindingi74 – 741Iron-sulfur 1 (4Fe-4S)Sequence Analysis
Metal bindingi77 – 771Iron-sulfur 1 (4Fe-4S)Sequence Analysis
Metal bindingi190 – 1901Iron-sulfur 2 (4Fe-4S)Sequence Analysis
Metal bindingi246 – 2461Iron-sulfur 2 (4Fe-4S)Sequence Analysis
Metal bindingi395 – 3951Iron-sulfur 2 (4Fe-4S)Sequence Analysis
Metal bindingi399 – 3991Iron-sulfur 2 (4Fe-4S)Sequence Analysis

GO - Molecular functioni

  1. 4 iron, 4 sulfur cluster binding Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. hematopoietic progenitor cell differentiation Source: Ensembl
  2. iron-sulfur cluster assembly Source: UniProtKB
  3. oxygen homeostasis Source: HGNC
  4. regulation of transcription, DNA-templated Source: HGNC
  5. response to hypoxia Source: HGNC
  6. small molecule metabolic process Source: Reactome
Complete GO annotation...

Keywords - Ligandi

4Fe-4S, Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

ReactomeiREACT_160176. Cytosolic iron-sulfur cluster assembly.

Names & Taxonomyi

Protein namesi
Recommended name:
Cytosolic Fe-S cluster assembly factor NARFL
Alternative name(s):
Iron-only hydrogenase-like protein 1
Short name:
IOP1
Nuclear prelamin A recognition factor-like protein
Protein related to Narf
Gene namesi
Name:NARFL
Synonyms:PRN
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 16

Organism-specific databases

HGNCiHGNC:14179. NARFL.

Subcellular locationi

GO - Cellular componenti

  1. CIA complex Source: UniProtKB
Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA128394707.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 476475Cytosolic Fe-S cluster assembly factor NARFLPRO_0000288485Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanine1 Publication

Keywords - PTMi

Acetylation

Proteomic databases

MaxQBiQ9H6Q4.
PaxDbiQ9H6Q4.
PeptideAtlasiQ9H6Q4.
PRIDEiQ9H6Q4.

PTM databases

PhosphoSiteiQ9H6Q4.

Expressioni

Tissue specificityi

Widely expressed.1 Publication

Gene expression databases

BgeeiQ9H6Q4.
CleanExiHS_NARFL.
ExpressionAtlasiQ9H6Q4. baseline.
GenevestigatoriQ9H6Q4.

Organism-specific databases

HPAiHPA040851.

Interactioni

Subunit structurei

Component of the CIA complex.2 Publications

Protein-protein interaction databases

BioGridi122176. 7 interactions.
STRINGi9606.ENSP00000251588.

Structurei

3D structure databases

ProteinModelPortaliQ9H6Q4.
SMRiQ9H6Q4. Positions 70-464.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NARF family.Curated

Phylogenomic databases

eggNOGiCOG4624.
GeneTreeiENSGT00390000017231.
HOGENOMiHOG000191744.
HOVERGENiHBG055005.
InParanoidiQ9H6Q4.
OMAiFIGPSQD.
OrthoDBiEOG7VB2FK.
PhylomeDBiQ9H6Q4.
TreeFamiTF106273.

Family and domain databases

Gene3Di4.10.260.20. 1 hit.
InterProiIPR009016. Fe_hydrogenase.
IPR004108. Fe_hydrogenase_lsu_C.
IPR003149. Fe_hydrogenase_ssu-like.
[Graphical view]
PfamiPF02906. Fe_hyd_lg_C. 1 hit.
PF02256. Fe_hyd_SSU. 1 hit.
[Graphical view]
SMARTiSM00902. Fe_hyd_SSU. 1 hit.
[Graphical view]
SUPFAMiSSF53920. SSF53920. 2 hits.

Sequences (3)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 3 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q9H6Q4-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MASPFSGALQ LTDLDDFIGP SQECIKPVKV EKRAGSGVAK IRIEDDGSYF
60 70 80 90 100
QINQDGGTRR LEKAKVSLND CLACSGCITS AETVLITQQS HEELKKVLDA
110 120 130 140 150
NKMAAPSQQR LVVVSVSPQS RASLAARFQL NPTDTARKLT SFFKKIGVHF
160 170 180 190 200
VFDTAFSRHF SLLESQREFV RRFRGQADCR QALPLLASAC PGWICYAEKT
210 220 230 240 250
HGSFILPHIS TARSPQQVMG SLVKDFFAQQ QHLTPDKIYH VTVMPCYDKK
260 270 280 290 300
LEASRPDFFN QEHQTRDVDC VLTTGEVFRL LEEEGVSLPD LEPAPLDSLC
310 320 330 340 350
SGASAEEPTS HRGGGSGGYL EHVFRHAARE LFGIHVAEVT YKPLRNKDFQ
360 370 380 390 400
EVTLEKEGQV LLHFAMAYGF RNIQNLVQRL KRGRCPYHYV EVMACPSGCL
410 420 430 440 450
NGGGQLQAPD RPSRELLQHV ERLYGMVRAE APEDAPGVQE LYTHWLQGTD
460 470
SECAGRLLHT QYHAVEKAST GLGIRW
Length:476
Mass (Da):53,020
Last modified:March 1, 2001 - v1
Checksum:i88A019DA4D7988EA
GO
Isoform 2 (identifier: Q9H6Q4-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-243: Missing.

Show »
Length:233
Mass (Da):26,135
Checksum:iAA85FD01731E7051
GO
Isoform 3 (identifier: Q9H6Q4-3) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-102: Missing.

Show »
Length:374
Mass (Da):42,010
Checksum:iD22B5E1FFD155545
GO

Sequence cautioni

The sequence AAK61251.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti205 – 2051I → T in BAD96725. 1 PublicationCurated

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti38 – 381V → M.
Corresponds to variant rs8045850 [ dbSNP | Ensembl ].
VAR_053911
Natural varianti444 – 4441H → R.
Corresponds to variant rs7188554 [ dbSNP | Ensembl ].
VAR_053912

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 243243Missing in isoform 2. 1 PublicationVSP_025694Add
BLAST
Alternative sequencei1 – 102102Missing in isoform 3. 1 PublicationVSP_025695Add
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY129231 mRNA. Translation: AAM98737.1.
AK025641 mRNA. Translation: BAB15199.1.
AK025861 mRNA. Translation: BAB15261.1.
AK095675 mRNA. Translation: BAG53105.1.
AK223005 mRNA. Translation: BAD96725.1.
AE006464 Genomic DNA. Translation: AAK61251.1. Sequence problems.
Z98258 Genomic DNA. Translation: CAM26480.1.
CH471112 Genomic DNA. Translation: EAW85723.1.
BC030248 mRNA. Translation: AAH30248.1.
BC129940 mRNA. Translation: AAI29941.1.
CCDSiCCDS10425.1. [Q9H6Q4-1]
RefSeqiNP_071938.1. NM_022493.1. [Q9H6Q4-1]
XP_005255557.1. XM_005255500.1. [Q9H6Q4-3]
UniGeneiHs.513247.

Genome annotation databases

EnsembliENST00000251588; ENSP00000251588; ENSG00000103245. [Q9H6Q4-1]
ENST00000540986; ENSP00000444008; ENSG00000103245. [Q9H6Q4-3]
ENST00000568545; ENSP00000457058; ENSG00000103245. [Q9H6Q4-3]
GeneIDi64428.
KEGGihsa:64428.
UCSCiuc002cjp.3. human. [Q9H6Q4-1]

Polymorphism databases

DMDMi74733617.

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY129231 mRNA. Translation: AAM98737.1.
AK025641 mRNA. Translation: BAB15199.1.
AK025861 mRNA. Translation: BAB15261.1.
AK095675 mRNA. Translation: BAG53105.1.
AK223005 mRNA. Translation: BAD96725.1.
AE006464 Genomic DNA. Translation: AAK61251.1. Sequence problems.
Z98258 Genomic DNA. Translation: CAM26480.1.
CH471112 Genomic DNA. Translation: EAW85723.1.
BC030248 mRNA. Translation: AAH30248.1.
BC129940 mRNA. Translation: AAI29941.1.
CCDSiCCDS10425.1. [Q9H6Q4-1]
RefSeqiNP_071938.1. NM_022493.1. [Q9H6Q4-1]
XP_005255557.1. XM_005255500.1. [Q9H6Q4-3]
UniGeneiHs.513247.

3D structure databases

ProteinModelPortaliQ9H6Q4.
SMRiQ9H6Q4. Positions 70-464.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi122176. 7 interactions.
STRINGi9606.ENSP00000251588.

PTM databases

PhosphoSiteiQ9H6Q4.

Polymorphism databases

DMDMi74733617.

Proteomic databases

MaxQBiQ9H6Q4.
PaxDbiQ9H6Q4.
PeptideAtlasiQ9H6Q4.
PRIDEiQ9H6Q4.

Protocols and materials databases

DNASUi64428.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000251588; ENSP00000251588; ENSG00000103245. [Q9H6Q4-1]
ENST00000540986; ENSP00000444008; ENSG00000103245. [Q9H6Q4-3]
ENST00000568545; ENSP00000457058; ENSG00000103245. [Q9H6Q4-3]
GeneIDi64428.
KEGGihsa:64428.
UCSCiuc002cjp.3. human. [Q9H6Q4-1]

Organism-specific databases

CTDi64428.
GeneCardsiGC16M000796.
HGNCiHGNC:14179. NARFL.
HPAiHPA040851.
MIMi611118. gene.
neXtProtiNX_Q9H6Q4.
PharmGKBiPA128394707.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiCOG4624.
GeneTreeiENSGT00390000017231.
HOGENOMiHOG000191744.
HOVERGENiHBG055005.
InParanoidiQ9H6Q4.
OMAiFIGPSQD.
OrthoDBiEOG7VB2FK.
PhylomeDBiQ9H6Q4.
TreeFamiTF106273.

Enzyme and pathway databases

ReactomeiREACT_160176. Cytosolic iron-sulfur cluster assembly.

Miscellaneous databases

ChiTaRSiNARFL. human.
GenomeRNAii64428.
NextBioi66437.
PROiQ9H6Q4.
SOURCEiSearch...

Gene expression databases

BgeeiQ9H6Q4.
CleanExiHS_NARFL.
ExpressionAtlasiQ9H6Q4. baseline.
GenevestigatoriQ9H6Q4.

Family and domain databases

Gene3Di4.10.260.20. 1 hit.
InterProiIPR009016. Fe_hydrogenase.
IPR004108. Fe_hydrogenase_lsu_C.
IPR003149. Fe_hydrogenase_ssu-like.
[Graphical view]
PfamiPF02906. Fe_hyd_lg_C. 1 hit.
PF02256. Fe_hyd_SSU. 1 hit.
[Graphical view]
SMARTiSM00902. Fe_hyd_SSU. 1 hit.
[Graphical view]
SUPFAMiSSF53920. SSF53920. 2 hits.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "A comparison of Narf, HPRN and Nar1p in human and yeast cells."
    Barton R.M., Worman H.J.
    Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
  2. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3).
    Tissue: Brain.
  3. Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S.
    Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Tissue: Small intestine.
  4. "Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16."
    Daniels R.J., Peden J.F., Lloyd C., Horsley S.W., Clark K., Tufarelli C., Kearney L., Buckle V.J., Doggett N.A., Flint J., Higgs D.R.
    Hum. Mol. Genet. 10:339-352(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  6. "The sequence and analysis of duplication-rich human chromosome 16."
    Martin J., Han C., Gordon L.A., Terry A., Prabhakar S., She X., Xie G., Hellsten U., Chan Y.M., Altherr M., Couronne O., Aerts A., Bajorek E., Black S., Blumer H., Branscomb E., Brown N.C., Bruno W.J.
    , Buckingham J.M., Callen D.F., Campbell C.S., Campbell M.L., Campbell E.W., Caoile C., Challacombe J.F., Chasteen L.A., Chertkov O., Chi H.C., Christensen M., Clark L.M., Cohn J.D., Denys M., Detter J.C., Dickson M., Dimitrijevic-Bussod M., Escobar J., Fawcett J.J., Flowers D., Fotopulos D., Glavina T., Gomez M., Gonzales E., Goodstein D., Goodwin L.A., Grady D.L., Grigoriev I., Groza M., Hammon N., Hawkins T., Haydu L., Hildebrand C.E., Huang W., Israni S., Jett J., Jewett P.B., Kadner K., Kimball H., Kobayashi A., Krawczyk M.-C., Leyba T., Longmire J.L., Lopez F., Lou Y., Lowry S., Ludeman T., Manohar C.F., Mark G.A., McMurray K.L., Meincke L.J., Morgan J., Moyzis R.K., Mundt M.O., Munk A.C., Nandkeshwar R.D., Pitluck S., Pollard M., Predki P., Parson-Quintana B., Ramirez L., Rash S., Retterer J., Ricke D.O., Robinson D.L., Rodriguez A., Salamov A., Saunders E.H., Scott D., Shough T., Stallings R.L., Stalvey M., Sutherland R.D., Tapia R., Tesmer J.G., Thayer N., Thompson L.S., Tice H., Torney D.C., Tran-Gyamfi M., Tsai M., Ulanovsky L.E., Ustaszewska A., Vo N., White P.S., Williams A.L., Wills P.L., Wu J.-R., Wu K., Yang J., DeJong P., Bruce D., Doggett N.A., Deaven L., Schmutz J., Grimwood J., Richardson P., Rokhsar D.S., Eichler E.E., Gilna P., Lucas S.M., Myers R.M., Rubin E.M., Pennacchio L.A.
    Nature 432:988-994(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  7. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
    Tissue: Brain.
  8. "IOP1, a novel hydrogenase-like protein that modulates hypoxia-inducible factor-1alpha activity."
    Huang J., Song D., Flores A., Zhao Q., Mooney S.M., Shaw L.M., Lee F.S.
    Biochem. J. 401:341-352(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, TISSUE SPECIFICITY.
  9. "A role for IOP1 in mammalian cytosolic iron-sulfur protein biogenesis."
    Song D., Lee F.S.
    J. Biol. Chem. 283:9231-9238(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION.
  10. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
    Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
    Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], CLEAVAGE OF INITIATOR METHIONINE [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.
  11. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  12. "MMS19 assembles iron-sulfur proteins required for DNA metabolism and genomic integrity."
    Stehling O., Vashisht A.A., Mascarenhas J., Jonsson Z.O., Sharma T., Netz D.J., Pierik A.J., Wohlschlegel J.A., Lill R.
    Science 337:195-199(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION IN THE CIA COMPLEX.
  13. "MMS19 links cytoplasmic iron-sulfur cluster assembly to DNA metabolism."
    Gari K., Leon Ortiz A.M., Borel V., Flynn H., Skehel J.M., Boulton S.J.
    Science 337:243-245(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION IN THE CIA COMPLEX.

Entry informationi

Entry nameiNARFL_HUMAN
AccessioniPrimary (citable) accession number: Q9H6Q4
Secondary accession number(s): A1L385
, B3KTJ3, Q53GC6, Q96S10, Q9H6J8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: March 1, 2001
Last modified: January 7, 2015
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 16
    Human chromosome 16: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.