Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Coiled-coil domain-containing protein 86

Gene

CCDC86

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • poly(A) RNA binding Source: UniProtKB

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Host-virus interaction

Enzyme and pathway databases

BioCyciZFISH:ENSG00000110104-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Coiled-coil domain-containing protein 86
Alternative name(s):
Cytokine-induced protein with coiled-coil domain
Gene namesi
Name:CCDC86
Synonyms:CYCLON
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

HGNCiHGNC:28359. CCDC86.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

DisGeNETi79080.
OpenTargetsiENSG00000110104.
PharmGKBiPA144596454.

Polymorphism and mutation databases

BioMutaiCCDC86.
DMDMi74733605.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002860921 – 360Coiled-coil domain-containing protein 86Add BLAST360

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei18PhosphoserineCombined sources1
Modified residuei21PhosphoserineCombined sources1
Modified residuei24PhosphoserineCombined sources1
Modified residuei47PhosphoserineCombined sources1
Modified residuei50PhosphoserineCombined sources1
Modified residuei58PhosphoserineCombined sources1
Modified residuei65PhosphothreonineCombined sources1
Modified residuei66PhosphoserineCombined sources1
Modified residuei69PhosphoserineCombined sources1
Modified residuei80PhosphoserineCombined sources1
Modified residuei91PhosphoserineCombined sources1
Modified residuei102PhosphoserineCombined sources1
Modified residuei110PhosphoserineCombined sources1
Modified residuei113PhosphoserineCombined sources1
Modified residuei128PhosphoserineCombined sources1
Modified residuei188PhosphoserineBy similarity1
Modified residuei217PhosphoserineCombined sources1
Modified residuei218PhosphoserineBy similarity1
Modified residuei342CitrullineBy similarity1

Post-translational modificationi

Citrullinated by PADI4.By similarity

Keywords - PTMi

Citrullination, Phosphoprotein

Proteomic databases

EPDiQ9H6F5.
MaxQBiQ9H6F5.
PaxDbiQ9H6F5.
PeptideAtlasiQ9H6F5.
PRIDEiQ9H6F5.

PTM databases

iPTMnetiQ9H6F5.
PhosphoSitePlusiQ9H6F5.

Expressioni

Gene expression databases

BgeeiENSG00000110104.
CleanExiHS_CCDC86.
ExpressionAtlasiQ9H6F5. baseline and differential.
GenevisibleiQ9H6F5. HS.

Organism-specific databases

HPAiHPA041117.
HPA041540.

Interactioni

Subunit structurei

Interacts with hepatitis C virus (HCV) protein NS5A.1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
P279583EBI-721289,EBI-8753518From a different organism.

Protein-protein interaction databases

BioGridi122529. 23 interactors.
IntActiQ9H6F5. 11 interactors.
MINTiMINT-1399934.
STRINGi9606.ENSP00000227520.

Structurei

3D structure databases

ProteinModelPortaliQ9H6F5.
SMRiQ9H6F5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili272 – 323Sequence analysisAdd BLAST52

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi45 – 200Pro-richAdd BLAST156

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG4538. Eukaryota.
ENOG41129IK. LUCA.
GeneTreeiENSGT00390000017281.
HOGENOMiHOG000111441.
HOVERGENiHBG097194.
InParanoidiQ9H6F5.
KOiK14822.
OMAiLRTSWQR.
OrthoDBiEOG091G13MD.
PhylomeDBiQ9H6F5.
TreeFamiTF325663.

Family and domain databases

InterProiIPR026570. CCDC86.
IPR005579. Cgr1-like.
[Graphical view]
PANTHERiPTHR13557. PTHR13557. 1 hit.
PfamiPF03879. Cgr1. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q9H6F5-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MDTPLRRSRR LGGLRPESPE SLTSVSRTRR ALVEFESNPE ETREPGSPPS
60 70 80 90 100
VQRAGLGSPE RPPKTSPGSP RLQQGAGLES PQGQPEPGAA SPQRQQDLHL
110 120 130 140 150
ESPQRQPEYS PESPRCQPKP SEEAPKCSQD QGVLASELAQ NKEELTPGAP
160 170 180 190 200
QHQLPPVPGS PEPYPGQQAP GPEPSQPLLE LTPRAPGSPR GQHEPSKPPP
210 220 230 240 250
AGETVTGGFG AKKRKGSSSQ APASKKLNKE ELPVIPKGKP KSGRVWKDRS
260 270 280 290 300
KKRFSQMLQD KPLRTSWQRK MKERQERKLA KDFARHLEEE KERRRQEKKQ
310 320 330 340 350
RRAENLKRRL ENERKAEVVQ VIRNPAKLKR AKKKQLRSIE KRDTLALLQK
360
QPPQQPAAKI
Length:360
Mass (Da):40,236
Last modified:March 1, 2001 - v1
Checksum:i5599506F3E799A6C
GO
Isoform 2 (identifier: Q9H6F5-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-256: Missing.

Note: No experimental confirmation available.
Show »
Length:104
Mass (Da):12,743
Checksum:i0E08850779677306
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_032069153Q → H.Corresponds to variant rs2074421dbSNPEnsembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_0569051 – 256Missing in isoform 2. 1 PublicationAdd BLAST256

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ501251 mRNA. Translation: ABF68612.1.
AK025974 mRNA. Translation: BAB15304.1.
AK302329 mRNA. Translation: BAG63661.1.
AP000777 Genomic DNA. No translation available.
BC001378 mRNA. Translation: AAH01378.1.
CCDSiCCDS7993.1. [Q9H6F5-1]
RefSeqiNP_077003.1. NM_024098.3. [Q9H6F5-1]
UniGeneiHs.4253.

Genome annotation databases

EnsembliENST00000227520; ENSP00000227520; ENSG00000110104. [Q9H6F5-1]
ENST00000545580; ENSP00000440906; ENSG00000110104. [Q9H6F5-2]
GeneIDi79080.
KEGGihsa:79080.
UCSCiuc001nqa.3. human. [Q9H6F5-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ501251 mRNA. Translation: ABF68612.1.
AK025974 mRNA. Translation: BAB15304.1.
AK302329 mRNA. Translation: BAG63661.1.
AP000777 Genomic DNA. No translation available.
BC001378 mRNA. Translation: AAH01378.1.
CCDSiCCDS7993.1. [Q9H6F5-1]
RefSeqiNP_077003.1. NM_024098.3. [Q9H6F5-1]
UniGeneiHs.4253.

3D structure databases

ProteinModelPortaliQ9H6F5.
SMRiQ9H6F5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi122529. 23 interactors.
IntActiQ9H6F5. 11 interactors.
MINTiMINT-1399934.
STRINGi9606.ENSP00000227520.

PTM databases

iPTMnetiQ9H6F5.
PhosphoSitePlusiQ9H6F5.

Polymorphism and mutation databases

BioMutaiCCDC86.
DMDMi74733605.

Proteomic databases

EPDiQ9H6F5.
MaxQBiQ9H6F5.
PaxDbiQ9H6F5.
PeptideAtlasiQ9H6F5.
PRIDEiQ9H6F5.

Protocols and materials databases

DNASUi79080.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000227520; ENSP00000227520; ENSG00000110104. [Q9H6F5-1]
ENST00000545580; ENSP00000440906; ENSG00000110104. [Q9H6F5-2]
GeneIDi79080.
KEGGihsa:79080.
UCSCiuc001nqa.3. human. [Q9H6F5-1]

Organism-specific databases

CTDi79080.
DisGeNETi79080.
GeneCardsiCCDC86.
HGNCiHGNC:28359. CCDC86.
HPAiHPA041117.
HPA041540.
MIMi611293. gene.
neXtProtiNX_Q9H6F5.
OpenTargetsiENSG00000110104.
PharmGKBiPA144596454.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG4538. Eukaryota.
ENOG41129IK. LUCA.
GeneTreeiENSGT00390000017281.
HOGENOMiHOG000111441.
HOVERGENiHBG097194.
InParanoidiQ9H6F5.
KOiK14822.
OMAiLRTSWQR.
OrthoDBiEOG091G13MD.
PhylomeDBiQ9H6F5.
TreeFamiTF325663.

Enzyme and pathway databases

BioCyciZFISH:ENSG00000110104-MONOMER.

Miscellaneous databases

ChiTaRSiCCDC86. human.
GenomeRNAii79080.
PROiQ9H6F5.
SOURCEiSearch...

Gene expression databases

BgeeiENSG00000110104.
CleanExiHS_CCDC86.
ExpressionAtlasiQ9H6F5. baseline and differential.
GenevisibleiQ9H6F5. HS.

Family and domain databases

InterProiIPR026570. CCDC86.
IPR005579. Cgr1-like.
[Graphical view]
PANTHERiPTHR13557. PTHR13557. 1 hit.
PfamiPF03879. Cgr1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCCD86_HUMAN
AccessioniPrimary (citable) accession number: Q9H6F5
Secondary accession number(s): B4DY99
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 2007
Last sequence update: March 1, 2001
Last modified: November 2, 2016
This is version 125 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.