Reviewed,
UniProtKB/Swiss-Prot Q9H5V9 (CX056_HUMAN)
Last modified
December 15, 2009.
Version 55.
History...
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90%,
50% identity |
Documents (3) |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: UPF0428 protein CXorf56 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Complete proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 222 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Sequence similarities | Belongs to the UPF0428 family. |
| Sequence caution | The sequence AAB96348.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Domain | Coiled coil |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Molecular function | protein binding Inferred from physical interaction. Source: IntAct |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| [1] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [2] | "The DNA sequence of the human X chromosome." Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C. Bentley D.R.Nature 434:325-337(2005) [PubMed: 15772651] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Skin. |
| [4] | Colinge J., Superti-Furga G., Bennett K.L. Submitted (OCT-2008) to UniProtKB Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
Cross-references
Sequence databases | |
|---|---|
| AK026618 mRNA. Translation: BAB15510.1. AC004000 Genomic DNA. Translation: AAB96348.1. Sequence problems. AC004913 Genomic DNA. No translation available. AC005190 Genomic DNA. No translation available. BC023506 mRNA. No translation available. | |
| IPI | IPI00005055. |
| RefSeq | NP_071384.1. |
| UniGene | Hs.248572 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9H5V9. 1 interaction. |
Proteomic databases | |
| PRIDE | Q9H5V9. |
Genome annotation databases | |
| Ensembl | ENST00000371594; ENSP00000360652; ENSG00000018610; Homo sapiens. [Genome view] ENST00000476164; ENSP00000420635; ENSG00000018610; Homo sapiens. [Genome view] ENST00000486230; ENSP00000420787; ENSG00000018610; Homo sapiens. [Genome view] |
| GeneID | 63932. |
| KEGG | hsa:63932. |
| UCSC | uc004erk.1. human. |
Organism-specific databases | |
| CTD | 63932. |
| GeneCards | GC0XM118556. |
| HGNC | HGNC:26239. CXorf56. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | HBG382892. |
| HOVERGEN | Q9H5V9. |
| InParanoid | Q9H5V9. |
| OMA | GIERQFR. |
| OrthoDB | EOG93R671. |
Gene expression databases | |
| ArrayExpress | Q9H5V9. |
| Bgee | Q9H5V9. |
| CleanEx | HS_CXorf56. |
| Genevestigator | Q9H5V9. |
Family and domain databases | |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 65686. |
Entry information
| Entry name | CX056_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9H5V9 Secondary accession number(s): O43351 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome X Human chromosome X: entries, gene names and cross-references to MIM |
| SIMILARITY comments Index of protein domains and families |
| Uncharacterized protein families (UPF) List of uncharacterized protein family (UPF) entries |

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