Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

UPF0686 protein C11orf1

Gene

C11orf1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0686 protein C11orf1
Gene namesi
Name:C11orf1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

EuPathDBiHostDB:ENSG00000137720.7
HGNCiHGNC:1163 C11orf1
neXtProtiNX_Q9H5F2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000137720
PharmGKBiPA25477

Polymorphism and mutation databases

BioMutaiC11orf1
DMDMi47605552

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000898291 – 150UPF0686 protein C11orf1Add BLAST150

Proteomic databases

PaxDbiQ9H5F2
PeptideAtlasiQ9H5F2
PRIDEiQ9H5F2

PTM databases

iPTMnetiQ9H5F2
PhosphoSitePlusiQ9H5F2

Expressioni

Gene expression databases

BgeeiENSG00000137720
CleanExiHS_C11orf1
ExpressionAtlasiQ9H5F2 baseline and differential
GenevisibleiQ9H5F2 HS

Organism-specific databases

HPAiHPA038410
HPA057519

Interactioni

Binary interactionsi

Show more details

Protein-protein interaction databases

BioGridi1222861 interactor.
IntActiQ9H5F2 14 interactors.

Structurei

3D structure databases

ProteinModelPortaliQ9H5F2
SMRiQ9H5F2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0686 family.Curated

Phylogenomic databases

eggNOGiENOG410IVWW Eukaryota
ENOG411205M LUCA
GeneTreeiENSGT00390000002905
HOGENOMiHOG000067902
HOVERGENiHBG050969
InParanoidiQ9H5F2
PhylomeDBiQ9H5F2
TreeFamiTF329225

Family and domain databases

InterProiView protein in InterPro
IPR009524 UPF0686
PANTHERiPTHR34524 PTHR34524, 1 hit
PfamiView protein in Pfam
PF06608 DUF1143, 1 hit

Sequencei

Sequence statusi: Complete.

Q9H5F2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASQCLCCS KFLFQRQNLA CFLTNPHCGS LVNADGHGEV WTDWNNMSKF
60 70 80 90 100
FQYGWRCTTN ENTYSNRTLM GNWNQERYDL RNIVQPKPLP SQFGHYFETT
110 120 130 140 150
YDTSYNNKMP LSTHRFKREP HWFPGHQPEL DPPRYKCTEK STYMNSYSKP
Length:150
Mass (Da):17,785
Last modified:March 1, 2001 - v1
Checksum:iBB1D0B7EDE8F2C7B
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_05416340V → A2 PublicationsCorresponds to variant dbSNP:rs9280Ensembl.1
Natural variantiVAR_05086149K → Q. Corresponds to variant dbSNP:rs11540721Ensembl.1
Natural variantiVAR_05086285Q → H. Corresponds to variant dbSNP:rs3180820Ensembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ250229 mRNA Translation: CAB96538.1
AK027152 mRNA Translation: BAB15674.1
CR457378 mRNA Translation: CAG33659.1
BC020628 mRNA Translation: AAH20628.1
CCDSiCCDS8350.1
RefSeqiNP_001317300.1, NM_001330371.1
NP_073598.1, NM_022761.2
UniGeneiHs.17546

Genome annotation databases

EnsembliENST00000260276; ENSP00000260276; ENSG00000137720
GeneIDi64776
KEGGihsa:64776
UCSCiuc001pmd.4 human

Keywords - Coding sequence diversityi

Polymorphism

Similar proteinsi

Entry informationi

Entry nameiCK001_HUMAN
AccessioniPrimary (citable) accession number: Q9H5F2
Secondary accession number(s): Q6I9X7, Q9NQC6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 24, 2004
Last sequence update: March 1, 2001
Last modified: February 28, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome