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Protein

UPF0686 protein C11orf1

Gene

C11orf1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0686 protein C11orf1
Gene namesi
Name:C11orf1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

EuPathDBiHostDB:ENSG00000137720.7.
HGNCiHGNC:1163. C11orf1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000137720.
PharmGKBiPA25477.

Polymorphism and mutation databases

BioMutaiC11orf1.
DMDMi47605552.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000898291 – 150UPF0686 protein C11orf1Add BLAST150

Proteomic databases

PaxDbiQ9H5F2.
PeptideAtlasiQ9H5F2.
PRIDEiQ9H5F2.

PTM databases

iPTMnetiQ9H5F2.
PhosphoSitePlusiQ9H5F2.

Expressioni

Gene expression databases

BgeeiENSG00000137720.
CleanExiHS_C11orf1.
ExpressionAtlasiQ9H5F2. baseline and differential.
GenevisibleiQ9H5F2. HS.

Organism-specific databases

HPAiHPA038410.
HPA057519.

Interactioni

Binary interactionsi

Show more details

Protein-protein interaction databases

BioGridi122286. 1 interactor.
IntActiQ9H5F2. 14 interactors.
MINTiMINT-1385135.

Structurei

3D structure databases

ProteinModelPortaliQ9H5F2.
SMRiQ9H5F2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0686 family.Curated

Phylogenomic databases

eggNOGiENOG410IVWW. Eukaryota.
ENOG411205M. LUCA.
GeneTreeiENSGT00390000002905.
HOGENOMiHOG000067902.
HOVERGENiHBG050969.
InParanoidiQ9H5F2.
PhylomeDBiQ9H5F2.
TreeFamiTF329225.

Family and domain databases

InterProiView protein in InterPro
IPR009524. UPF0686.
PfamiView protein in Pfam
PF06608. DUF1143. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9H5F2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASQCLCCS KFLFQRQNLA CFLTNPHCGS LVNADGHGEV WTDWNNMSKF
60 70 80 90 100
FQYGWRCTTN ENTYSNRTLM GNWNQERYDL RNIVQPKPLP SQFGHYFETT
110 120 130 140 150
YDTSYNNKMP LSTHRFKREP HWFPGHQPEL DPPRYKCTEK STYMNSYSKP
Length:150
Mass (Da):17,785
Last modified:March 1, 2001 - v1
Checksum:iBB1D0B7EDE8F2C7B
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_05416340V → A2 PublicationsCorresponds to variant dbSNP:rs9280Ensembl.1
Natural variantiVAR_05086149K → Q. Corresponds to variant dbSNP:rs11540721Ensembl.1
Natural variantiVAR_05086285Q → H. Corresponds to variant dbSNP:rs3180820Ensembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ250229 mRNA. Translation: CAB96538.1.
AK027152 mRNA. Translation: BAB15674.1.
CR457378 mRNA. Translation: CAG33659.1.
BC020628 mRNA. Translation: AAH20628.1.
CCDSiCCDS8350.1.
RefSeqiNP_001317300.1. NM_001330371.1.
NP_073598.1. NM_022761.2.
UniGeneiHs.17546.

Genome annotation databases

EnsembliENST00000260276; ENSP00000260276; ENSG00000137720.
GeneIDi64776.
KEGGihsa:64776.
UCSCiuc001pmd.4. human.

Keywords - Coding sequence diversityi

Polymorphism

Similar proteinsi

Entry informationi

Entry nameiCK001_HUMAN
AccessioniPrimary (citable) accession number: Q9H5F2
Secondary accession number(s): Q6I9X7, Q9NQC6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 24, 2004
Last sequence update: March 1, 2001
Last modified: October 25, 2017
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. SIMILARITY comments
    Index of protein domains and families
  5. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries