Q9H553 (ALG2_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Alpha-1,3/1,6-mannosyltransferase ALG2
EC=2.4.1.132
EC=2.4.1.257

Alternative name(s):
Asparagine-linked glycosylation protein 2 homolog
GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase
GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

Gene names

Name:	ALG2
ORF Names:	UNQ666/PRO1298

Organism

Homo sapiens (Human) [Reference proteome]

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	416 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	Mannosylates Man2GlcNAc(2)-dolichol diphosphate and Man1GlcNAc(2)-dolichol diphosphate to form Man3GlcNAc(2)-dolichol diphosphate. Ref.6
Catalytic activity	GDP-D-mannose + D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol = GDP + D-Man-alpha-(1->3)-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-GlcNAc-diphosphodolichol. GDP-D-mannose + D-Man-alpha-(1->3)-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol = GDP + D-Man-alpha-(1->3)-(D-Man-alpha-(1->6))-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol.
Pathway	Protein modification; protein glycosylation.
Subcellular location	Membrane; Single-pass membrane protein Potential.
Involvement in disease	Congenital disorder of glycosylation 1I (CDG1I) [MIM:607906]: A multisystem disorder caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. Note: The disease is caused by mutations affecting the gene represented in this entry. Ref.6
Sequence similarities	Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.

Ontologies

Keywords
Cellular component	Membrane
Coding sequence diversity	Alternative splicing Polymorphism
Disease	Congenital disorder of glycosylation
Domain	Transmembrane Transmembrane helix
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	dolichol-linked oligosaccharide biosynthetic process Inferred from genetic interaction Ref.6. Source: UniProtKB post-translational protein modification Traceable author statement. Source: Reactome protein N-linked glycosylation via asparagine Traceable author statement. Source: Reactome protein glycosylation in endoplasmic reticulum Inferred from genetic interaction Ref.6. Source: UniProtKB response to calcium ion Inferred from direct assay PubMed 12445460PubMed 17196169. Source: UniProtKB
Cellular_component	endoplasmic reticulum membrane Traceable author statement. Source: Reactome integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW nucleus Inferred from direct assay PubMed 11278427PubMed 17045351PubMed 17196169. Source: UniProtKB perinuclear region of cytoplasm Inferred from direct assay PubMed 17196169. Source: UniProtKB
Molecular_function	GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity Inferred from electronic annotation. Source: EC alpha-1,3-mannosyltransferase activity Inferred from direct assay Ref.6. Source: UniProtKB calcium-dependent protein binding Inferred from mutant phenotype PubMed 14999017. Source: UniProtKB glycolipid 6-alpha-mannosyltransferase activity Inferred from electronic annotation. Source: InterPro protein anchor Inferred from mutant phenotype PubMed 16957052. Source: UniProtKB
Complete GO annotation...

Alternative products

This entry describes 2 isoforms produced by alternative splicing. [Align] [Select]

Isoform 1 (identifier: Q9H553-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

Isoform 2 (identifier: Q9H553-2)

The sequence of this isoform differs from the canonical sequence as follows:
     1-91: Missing.
     92-116: VRMVFLALYVLFLADEEFDVVVCDQ → MPLLKLVHGSPLVFGEKFKLFTL

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 416	416	Alpha-1,3/1,6-mannosyltransferase ALG2		PRO_0000080260
Regions
	Transmembrane	85 – 105	21	Helical; Potential
Natural variations
	Alternative sequence	1 – 91	91	Missing in isoform 2.		VSP_013188
	Alternative sequence	92 – 116	25	VRMVF…VVCDQ → MPLLKLVHGSPLVFGEKFKL FTL in isoform 2.		VSP_013189
	Natural variant	11	1	S → P. Corresponds to variant rs11545137 [ dbSNP | Ensembl ].		VAR_049351
	Natural variant	367	1	V → A. Corresponds to variant rs35626507 [ dbSNP | Ensembl ].		VAR_049352
Experimental info
	Sequence conflict	178	1	Q → R in BAC11449. Ref.2

Sequences

	Sequence		Length	Mass (Da)
	Isoform 1 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 778DB1FD069E7F29	FASTA	416	47,092
	10 20 30 40 50 60 MAEEQGRERD SVPKPSVLFL HPDLGVGGAE RLVLDAALAL QARGCSVKIW TAHYDPGHCF 70 80 90 100 110 120 AESRELPVRC AGDWLPRGLG WGGRGAAVCA YVRMVFLALY VLFLADEEFD VVVCDQVSAC 130 140 150 160 170 180 IPVFRLARRR KKILFYCHFP DLLLTKRDSF LKRLYRAPID WIEEYTTGMA DCILVNSQFT 190 200 210 220 230 240 AAVFKETFKS LSHIDPDVLY PSLNVTSFDS VVPEKLDDLV PKGKKFLLLS INRYERKKNL 250 260 270 280 290 300 TLALEALVQL RGRLTSQDWE RVHLIVAGGY DERVLENVEH YQELKKMVQQ SDLGQYVTFL 310 320 330 340 350 360 RSFSDKQKIS LLHSCTCVLY TPSNEHFGIV PLEAMYMQCP VIAVNSGGPL ESIDHSVTGF 370 380 390 400 410 LCEPDPVHFS EAIEKFIREP SLKATMGLAG RARVKEKFSP EAFTEQLYRY VTKLLV
	Isoform 2 [UniParc]. Checksum: C8506E37A7E15848	FASTA	323	37,017
	10 20 30 40 50 60 MPLLKLVHGS PLVFGEKFKL FTLVSACIPV FRLARRRKKI LFYCHFPDLL LTKRDSFLKR 70 80 90 100 110 120 LYRAPIDWIE EYTTGMADCI LVNSQFTAAV FKETFKSLSH IDPDVLYPSL NVTSFDSVVP 130 140 150 160 170 180 EKLDDLVPKG KKFLLLSINR YERKKNLTLA LEALVQLRGR LTSQDWERVH LIVAGGYDER 190 200 210 220 230 240 VLENVEHYQE LKKMVQQSDL GQYVTFLRSF SDKQKISLLH SCTCVLYTPS NEHFGIVPLE 250 260 270 280 290 300 AMYMQCPVIA VNSGGPLESI DHSVTGFLCE PDPVHFSEAI EKFIREPSLK ATMGLAGRAR 310 320 VKEKFSPEAF TEQLYRYVTK LLV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Molecular cloning of the mammalian genes which complement the defect of the yeast alg2 mutation." Takahashi T., Katoh R., Okutomi S., Suzuki Y., Mori H., Takizawa Y., Nishikawa Y. Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
[2]	"The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment." Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J., Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P., Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E. , Heldens S., Huang A., Kim H.S., Klimowski L., Jin Y., Johnson S., Lee J., Lewis L., Liao D., Mark M.R., Robbie E., Sanchez C., Schoenfeld J., Seshagiri S., Simmons L., Singh J., Smith V., Stinson J., Vagts A., Vandlen R.L., Watanabe C., Wieand D., Woods K., Xie M.-H., Yansura D.G., Yi S., Yu G., Yuan J., Zhang M., Zhang Z., Goddard A.D., Wood W.I., Godowski P.J., Gray A.M. Genome Res. 13:2265-2270(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
[3]	"Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S. Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2). Tissue: Placenta.
[4]	"DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I. Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[5]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Embryonic testis carcinoma.
[6]	"A new type of congenital disorders of glycosylation (CDG-Ii) provides new insights into the early steps of dolichol-linked oligosaccharide biosynthesis." Thiel C., Schwarz M., Peng J., Grzmil M., Hasilik M., Braulke T., Kohlschuetter A., von Figura K., Lehle L., Koerner C. J. Biol. Chem. 278:22498-22505(2003) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INVOLVEMENT IN CDG1I.
[7]	"Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Web resources

GeneReviews

GGDB

GlycoGene database

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB161356 mRNA. Translation: BAD11905.1. AY358697 mRNA. Translation: AAQ89060.1. AK027417 mRNA. Translation: BAB55099.1. AK074704 mRNA. Translation: BAC11150.1. AK074988 mRNA. Translation: BAC11337.1. AK075172 mRNA. Translation: BAC11449.1. AL137067 Genomic DNA. Translation: CAC07999.1. BC017876 mRNA. Translation: AAH17876.1.
IPI	IPI00171443. IPI00386072.
RefSeq	NP_149078.1. NM_033087.3.
UniGene	Hs.40919.
3D structure databases
ProteinModelPortal	Q9H553.
ModBase	Search...
Protein-protein interaction databases
STRING	9606.ENSP00000417764.
Protein family/group databases
CAZy	GT4. Glycosyltransferase Family 4.
PTM databases
PhosphoSite	Q9H553.
Polymorphism databases
DMDM	46395991.
Proteomic databases
PaxDb	Q9H553.
PRIDE	Q9H553.
Protocols and materials databases
DNASU	85365.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000238477; ENSP00000432675; ENSG00000119523. ENST00000319033; ENSP00000326609; ENSG00000119523. ENST00000476832; ENSP00000417764; ENSG00000119523.
GeneID	85365.
KEGG	hsa:85365.
UCSC	uc004azf.3. human. uc004azg.3. human.
Organism-specific databases
CTD	85365.
GeneCards	GC09M101978.
H-InvDB	HIX0019474.
HGNC	HGNC:23159. ALG2.
HPA	HPA041512. HPA041601.
MIM	607905. gene. 607906. phenotype.
neXtProt	NX_Q9H553.
Orphanet	79326. ALG2-CDG syndrome.
PharmGKB	PA134956849.
GenAtlas	Search...
Phylogenomic databases
eggNOG	COG0438.
HOGENOM	HOG000177048.
HOVERGEN	HBG009445.
InParanoid	Q9H553.
KO	K03843.
OMA	KIWTAHY.
OrthoDB	EOG4X97H7.
PhylomeDB	Q9H553.
Enzyme and pathway databases
Reactome	REACT_17015. Metabolism of proteins.
UniPathway	UPA00378.
Gene expression databases
ArrayExpress	Q9H553.
Bgee	Q9H553.
CleanEx	HS_ALG2.
Genevestigator	Q9H553.
GermOnline	ENSG00000119523. Homo sapiens.
Family and domain databases
InterPro	IPR027054. ALG2. IPR001296. Glyco_trans_1. [Graphical view]
PANTHER	PTHR12526:SF22. PTHR12526:SF22. 1 hit.
Pfam	PF00534. Glycos_transf_1. 1 hit. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	ALG2. human.
GenomeRNAi	85365.
NextBio	75895.
SOURCE	Search...

Entry information

Entry name

ALG2_HUMAN

Accession

Primary (citable) accession number: Q9H553
Secondary accession number(s): A2A2Y0, Q8NBX2, Q8NC39

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 13, 2004
Last sequence update:	March 1, 2001
Last modified:	May 29, 2013
This is version 106 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.