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Protein

Uncharacterized protein ARRDC1-AS1

Gene

ARRDC1-AS1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein ARRDC1-AS1
Alternative name(s):
ARRDC1 antisense RNA 1
ARRDC1 antisense gene protein 1
Gene namesi
Name:ARRDC1-AS1
Synonyms:C9orf37
ORF Names:AD038
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:23395. ARRDC1-AS1.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134985448.

Polymorphism and mutation databases

BioMutaiC9orf37.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 176176Uncharacterized protein ARRDC1-AS1PRO_0000089680Add
BLAST

Proteomic databases

EPDiQ9H2J1.
MaxQBiQ9H2J1.
PaxDbiQ9H2J1.
PeptideAtlasiQ9H2J1.
PRIDEiQ9H2J1.

Expressioni

Gene expression databases

BgeeiQ9H2J1.
CleanExiHS_C9orf37.

Organism-specific databases

HPAiHPA021817.

Structurei

3D structure databases

ProteinModelPortaliQ9H2J1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410KCEM. Eukaryota.
ENOG4110P1S. LUCA.
HOGENOMiHOG000111637.
InParanoidiQ9H2J1.
OrthoDBiEOG7Z95NV.
PhylomeDBiQ9H2J1.

Family and domain databases

InterProiIPR007677. Gasdermin.
[Graphical view]
PANTHERiPTHR16399. PTHR16399. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9H2J1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEFHYVAQAD LELLTSSNPP ASASQSTGIT GGSHRARPGP VHFIDKVTDK
60 70 80 90 100
PSHSHPFALK ENWNLNPEPS SPPSPLFLEA PSRQASQHHG ASPGAGTSAG
110 120 130 140 150
CPFEKCCSTE PCLSGLGDVG RGEAASLRAR PGSGASRGQG PGSRVSCRRD
160 170
LGKPLHAPAG FSAGEVHTTP LGNLGA
Length:176
Mass (Da):18,048
Last modified:August 21, 2007 - v2
Checksum:i8C2B3CD9D9E7CD4C
GO

Sequence cautioni

The sequence AAG44726.1 differs from that shown. Reason: Frameshift at position 141. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF267857 mRNA. Translation: AAG44726.1. Frameshift.
AL365502 Genomic DNA. Translation: CAI14590.1.
BC066646 mRNA. Translation: AAH66646.1.
BC117267 mRNA. Translation: AAI17268.1.
UniGeneiHs.522520.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF267857 mRNA. Translation: AAG44726.1. Frameshift.
AL365502 Genomic DNA. Translation: CAI14590.1.
BC066646 mRNA. Translation: AAH66646.1.
BC117267 mRNA. Translation: AAI17268.1.
UniGeneiHs.522520.

3D structure databases

ProteinModelPortaliQ9H2J1.
ModBaseiSearch...
MobiDBiSearch...

Polymorphism and mutation databases

BioMutaiC9orf37.

Proteomic databases

EPDiQ9H2J1.
MaxQBiQ9H2J1.
PaxDbiQ9H2J1.
PeptideAtlasiQ9H2J1.
PRIDEiQ9H2J1.

Protocols and materials databases

DNASUi85026.
Structural Biology KnowledgebaseSearch...

Organism-specific databases

GeneCardsiARRDC1-AS1.
H-InvDBHIX0008577.
HGNCiHGNC:23395. ARRDC1-AS1.
HPAiHPA021817.
neXtProtiNX_Q9H2J1.
PharmGKBiPA134985448.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410KCEM. Eukaryota.
ENOG4110P1S. LUCA.
HOGENOMiHOG000111637.
InParanoidiQ9H2J1.
OrthoDBiEOG7Z95NV.
PhylomeDBiQ9H2J1.

Miscellaneous databases

ChiTaRSiC9orf37. human.
PROiQ9H2J1.

Gene expression databases

BgeeiQ9H2J1.
CleanExiHS_C9orf37.

Family and domain databases

InterProiIPR007677. Gasdermin.
[Graphical view]
PANTHERiPTHR16399. PTHR16399. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Adrenal gland.
  2. "DNA sequence and analysis of human chromosome 9."
    Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
    , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
    Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain and Pancreas.

Entry informationi

Entry nameiCI037_HUMAN
AccessioniPrimary (citable) accession number: Q9H2J1
Secondary accession number(s): Q17RM5, Q5T368
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: August 21, 2007
Last modified: July 6, 2016
This is version 82 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.