Q9H1H9 (KI13A_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 98.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Kinesin-like protein KIF13A Alternative name(s): Kinesin-like protein RBKIN | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1805 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Plus end-directed microtubule-dependent motor protein involved in intracellular transport and regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis and cytokinesis. Mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex. During melanosome maturation, required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. Also required for the abcission step in cytokinesis: mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis. Ref.6 Ref.7 |
| Subunit structure | Interacts with AP2B1 By similarity. Interacts with ZFYVE26. Interacts with AP1G1 and AP1G2. Ref.6 Ref.7 |
| Subcellular location | Cytoplasm › cytoskeleton › centrosome. Midbody. Endosome membrane. Golgi apparatus membrane By similarity. Note: Recruited to the midbody during cytokinesis. Ref.6 Ref.7 |
| Tissue specificity | Widely expressed, with highest levels in heart, brain and skeletal muscle. Ref.1 Ref.2 |
| Developmental stage | Expressed at very low level in most fetal tissues, but at higher levels in skeletal muscle and lung. Ref.2 |
| Sequence similarities | Belongs to the kinesin-like protein family. Contains 1 FHA domain. Contains 1 kinesin-motor domain. |
| Sequence caution | The sequence CAI21670.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI21671.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI40947.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI40948.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
Alternative products
| This entry describes 5 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9H1H9-1) Also known as: RBKIN1; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9H1H9-2) Also known as: RBKIN2; The sequence of this isoform differs from the canonical sequence as follows: 1493-1527: Missing. | ||||||
| Isoform 3 (identifier: Q9H1H9-3) The sequence of this isoform differs from the canonical sequence as follows: 1071-1083: Missing. 1493-1527: Missing. 1792-1797: VIIPEA → GGTTSR 1798-1805: Missing. | ||||||
| Isoform 4 (identifier: Q9H1H9-4) The sequence of this isoform differs from the canonical sequence as follows: 1071-1083: Missing. 1493-1527: Missing. | ||||||
| Isoform 5 (identifier: Q9H1H9-5) The sequence of this isoform differs from the canonical sequence as follows: 50-70: KPPKVFAFDYCFWSMDESNTT → LVTVAHISNSSTLGGQGKRIT 71-1805: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1805 | 1805 | Kinesin-like protein KIF13A | PRO_0000125446 | |||||
Regions | |||||||||
| Domain | 1 – 277 | 277 | Kinesin-motor | ||||||
| Domain | 469 – 519 | 51 | FHA | ||||||
| Nucleotide binding | 102 – 109 | 8 | ATP By similarity | ||||||
| Coiled coil | 359 – 436 | 78 | Potential | ||||||
| Coiled coil | 602 – 775 | 174 | Potential | ||||||
| Coiled coil | 1100 – 1138 | 39 | Potential | ||||||
| Coiled coil | 1518 – 1547 | 30 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 1287 | 1 | Phosphoserine Ref.8 | ||||||
| Modified residue | 1529 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1648 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1698 | 1 | Phosphoserine By similarity | ||||||
Natural variations | |||||||||
| Alternative sequence | 50 – 70 | 21 | KPPKV…ESNTT → LVTVAHISNSSTLGGQGKRI T in isoform 5. | VSP_045584 | |||||
| Alternative sequence | 71 – 1805 | 1735 | Missing in isoform 5. | VSP_045585 | |||||
| Alternative sequence | 1071 – 1083 | 13 | Missing in isoform 3 and isoform 4. | VSP_021724 | |||||
| Alternative sequence | 1493 – 1527 | 35 | Missing in isoform 2, isoform 3 and isoform 4. | VSP_002870 | |||||
| Alternative sequence | 1792 – 1797 | 6 | VIIPEA → GGTTSR in isoform 3. | VSP_021725 | |||||
| Alternative sequence | 1798 – 1805 | 8 | Missing in isoform 3. | VSP_021726 | |||||
| Natural variant | 1415 | 1 | M → V. Corresponds to variant rs17689215 [ dbSNP | Ensembl ]. | VAR_029389 | |||||
| Natural variant | 1600 | 1 | F → S. Corresponds to variant rs12211658 [ dbSNP | Ensembl ]. | VAR_049699 | |||||
Experimental info | |||||||||
| Sequence conflict | 674 | 1 | S → G in AAG38890. Ref.2 | ||||||
| Sequence conflict | 674 | 1 | S → G in AAG38891. Ref.2 | ||||||
| Sequence conflict | 925 | 1 | T → A in AAG38890. Ref.2 | ||||||
| Sequence conflict | 925 | 1 | T → A in AAG38891. Ref.2 | ||||||
| Sequence conflict | 1185 | 1 | L → P in AAG38890. Ref.2 | ||||||
| Sequence conflict | 1185 | 1 | L → P in AAG38891. Ref.2 | ||||||
| Sequence conflict | 1521 | 1 | S → N in AAG38890. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Identification of the human KIF13A gene homologous to Drosophila kinesin-73 and candidate for schizophrenia." Jamain S., Quach H., Fellous M., Bourgeron T. Genomics 74:36-44(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 3 AND 4), TISSUE SPECIFICITY. Tissue: Fetal brain. |
| [2] | "Genomic amplification in retinoblastoma narrowed to 0.6 megabase on chromosome 6p containing a kinesin-like gene, RBKIN." Chen D., Pajovic S., Duckett A., Brown V.D., Squire J.A., Gallie B.L. Cancer Res. 62:967-971(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), TISSUE SPECIFICITY, DEVELOPMENTAL STAGE. Tissue: Retina. |
| [3] | "The DNA sequence and analysis of human chromosome 6." Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D. Beck S.Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 2; 4 AND 5). Tissue: Glioblastoma. |
| [5] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [6] | "AP-1 and KIF13A coordinate endosomal sorting and positioning during melanosome biogenesis." Delevoye C., Hurbain I., Tenza D., Sibarita J.B., Uzan-Gafsou S., Ohno H., Geerts W.J., Verkleij A.J., Salamero J., Marks M.S., Raposo G. J. Cell Biol. 187:247-264(2009) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH AP1G1 AND AP1G2, SUBCELLULAR LOCATION. |
| [7] | "PtdIns(3)P controls cytokinesis through KIF13A-mediated recruitment of FYVE-CENT to the midbody." Sagona A.P., Nezis I.P., Pedersen N.M., Liestol K., Poulton J., Rusten T.E., Skotheim R.I., Raiborg C., Stenmark H. Nat. Cell Biol. 12:362-371(2010) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH ZFYVE26. |
| [8] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1287, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AJ291578 mRNA. Translation: CAC20442.1. AJ291579 mRNA. Translation: CAC20443.1. AY014403 mRNA. Translation: AAG38890.1. AY014404 mRNA. Translation: AAG38891.1. AL023807, AL138724 Genomic DNA. Translation: CAI21670.1. Sequence problems. AL023807, AL138724 Genomic DNA. Translation: CAI21671.1. Sequence problems. AL138724, AL023807 Genomic DNA. Translation: CAI40947.1. Sequence problems. AL138724, AL023807 Genomic DNA. Translation: CAI40948.1. Sequence problems. BC062673 mRNA. No translation available. BC127115 mRNA. Translation: AAI27116.1. BC127116 mRNA. Translation: AAI27117.1. |
| IPI | IPI00164861. IPI00218490. IPI00295487. IPI00807394. IPI00967988. |
| RefSeq | NP_001099036.1. NM_001105566.2. NP_001099037.1. NM_001105567.2. NP_001099038.1. NM_001105568.2. NP_001230352.1. NM_001243423.1. NP_071396.4. NM_022113.5. |
| UniGene | Hs.94499. |
3D structure databases | |
| ProteinModelPortal | Q9H1H9. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-52276N. |
| IntAct | Q9H1H9. 3 interactions. |
| MINT | MINT-1185433. |
| STRING | 9606.ENSP00000259711. |
PTM databases | |
| PhosphoSite | Q9H1H9. |
Polymorphism databases | |
| DMDM | 118572662. |
Proteomic databases | |
| PaxDb | Q9H1H9. |
| PRIDE | Q9H1H9. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000259711; ENSP00000259711; ENSG00000137177. ENST00000378814; ENSP00000368091; ENSG00000137177. ENST00000378826; ENSP00000368103; ENSG00000137177. ENST00000378843; ENSP00000368120; ENSG00000137177. ENST00000502704; ENSP00000425453; ENSG00000137177. |
| GeneID | 63971. |
| KEGG | hsa:63971. |
| UCSC | uc003ncf.3. human. uc003ncg.4. human. uc003nch.4. human. uc003nci.4. human. |
Organism-specific databases | |
| CTD | 63971. |
| GeneCards | GC06M017759. |
| HGNC | HGNC:14566. KIF13A. |
| HPA | HPA029253. HPA029254. |
| MIM | 605433. gene. |
| neXtProt | NX_Q9H1H9. |
| PharmGKB | PA30098. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG5059. |
| HOVERGEN | HBG052244. |
| InParanoid | Q9H1H9. |
| KO | K10392. |
| OMA | SKNGQPA. |
Enzyme and pathway databases | |
| Reactome | REACT_17015. Metabolism of proteins. |
Gene expression databases | |
| ArrayExpress | Q9H1H9. |
| Bgee | Q9H1H9. |
| CleanEx | HS_KIF13A. |
| Genevestigator | Q9H1H9. |
| GermOnline | ENSG00000137177. Homo sapiens. |
Family and domain databases | |
| Gene3D | 2.60.200.20. 1 hit. 3.40.850.10. 1 hit. |
| InterPro | IPR000253. FHA_dom. IPR022140. KIF1B. IPR022164. Kinesin-like. IPR019821. Kinesin_motor_CS. IPR001752. Kinesin_motor_dom. IPR008984. SMAD_FHA_domain. [Graphical view] |
| Pfam | PF12473. DUF3694. 2 hits. PF00498. FHA. 1 hit. PF12423. KIF1B. 1 hit. PF00225. Kinesin. 1 hit. [Graphical view] |
| PRINTS | PR00380. KINESINHEAVY. |
| SMART | SM00240. FHA. 1 hit. SM00129. KISc. 1 hit. [Graphical view] |
| SUPFAM | SSF49879. SMAD_FHA. 1 hit. |
| PROSITE | PS50006. FHA_DOMAIN. False negative. PS00411. KINESIN_MOTOR_DOMAIN1. 1 hit. PS50067. KINESIN_MOTOR_DOMAIN2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | KIF13A. human. |
| GenomeRNAi | 63971. |
| NextBio | 65762. |
| SOURCE | Search... |
Entry information
| Entry name | KI13A_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9H1H9 Secondary accession number(s): A0JP21 Q9H1H8 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 6 Human chromosome 6: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
