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Protein

Protein FAM234A

Gene

FAM234A

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM234A
Alternative name(s):
Protein ITFG3
Gene namesi
Name:FAM234AImported
Synonyms:C16orf9, ITFG3
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

HGNCiHGNC:14163. FAM234A.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 49CytoplasmicSequence analysisAdd BLAST49
Transmembranei50 – 70Helical; Signal-anchor for type II membrane proteinSequence analysisAdd BLAST21
Topological domaini71 – 552ExtracellularSequence analysisAdd BLAST482

GO - Cellular componenti

  • cell surface Source: UniProtKB
  • extracellular exosome Source: UniProtKB
  • integral component of membrane Source: UniProtKB-KW

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

DisGeNETi83986.
OpenTargetsiENSG00000167930.
PharmGKBiPA25564.

Polymorphism and mutation databases

BioMutaiITFG3.
DMDMi74733531.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002479931 – 552Protein FAM234AAdd BLAST552

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei21PhosphoserineBy similarity1
Glycosylationi116N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi314N-linked (GlcNAc...) asparagine1 Publication1
Glycosylationi389N-linked (GlcNAc...) asparagine2 Publications1
Glycosylationi473N-linked (GlcNAc...) asparagine1 Publication1

Keywords - PTMi

Glycoprotein, Phosphoprotein

Proteomic databases

EPDiQ9H0X4.
MaxQBiQ9H0X4.
PaxDbiQ9H0X4.
PeptideAtlasiQ9H0X4.
PRIDEiQ9H0X4.

PTM databases

iPTMnetiQ9H0X4.
PhosphoSitePlusiQ9H0X4.
SwissPalmiQ9H0X4.

Expressioni

Gene expression databases

BgeeiENSG00000167930.
CleanExiHS_ITFG3.
ExpressionAtlasiQ9H0X4. baseline and differential.
GenevisibleiQ9H0X4. HS.

Organism-specific databases

HPAiHPA011651.

Interactioni

Protein-protein interaction databases

BioGridi123837. 6 interactors.
IntActiQ9H0X4. 2 interactors.
MINTiMINT-4724606.
STRINGi9606.ENSP00000301678.

Structurei

3D structure databases

ProteinModelPortaliQ9H0X4.
SMRiQ9H0X4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM234 family.Curated

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IF25. Eukaryota.
ENOG4111VVF. LUCA.
GeneTreeiENSGT00530000063694.
HOGENOMiHOG000069926.
HOVERGENiHBG056541.
InParanoidiQ9H0X4.
KOiK17258.
OMAiFIIPCPD.
OrthoDBiEOG091G0JUN.
PhylomeDBiQ9H0X4.
TreeFamiTF327203.

Family and domain databases

InterProiView protein in InterPro
IPR011047. Quinoprotein_ADH-like_supfam.
SUPFAMiSSF50998. SSF50998. 2 hits.

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q9H0X4-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MLDHKDLEAE IHPLKNEERK SQENLGNPSK NEDNVKSAPP QSRLSRCRAA
60 70 80 90 100
AFFLSLFLCL FVVFVVSFVI PCPDRPASQR MWRIDYSAAV IYDFLAVDDI
110 120 130 140 150
NGDRIQDVLF LYKNTNSSNN FSRSCVDEGF SSPCTFAAAV SGANGSTLWE
160 170 180 190 200
RPVAQDVALV ECAVPQPRGS EAPSACILVG RPSSFIAVNL FTGETLWNHS
210 220 230 240 250
SSFSGNASIL SPLLQVPDVD GDGAPDLLVL TQEREEVSGH LYSGSTGHQI
260 270 280 290 300
GLRGSLGVDG ESGFLLHVTR TGAHYILFPC ASSLCGCSVK GLYEKVTGSG
310 320 330 340 350
GPFKSDPHWE SMLNATTRRM LSHSSGAVRY LMHVPGNAGA DVLLVGSEAF
360 370 380 390 400
VLLDGQELTP RWTPKAAHVL RKPIFGRYKP DTLAVAVENG TGTDRQILFL
410 420 430 440 450
DLGTGAVLCS LALPSLPGGP LSASLPTADH RSAFFFWGLH ELGSTSETET
460 470 480 490 500
GEARHSLYMF HPTLPRVLLE LANVSTHIVA FDAVLFEPSR HAAYILLTGP
510 520 530 540 550
ADSEAPGLVS VIKHKVRDLV PSSRVVRLGE GGPDSDQAIR DRFSRLRYQS

EA
Length:552
Mass (Da):59,660
Last modified:March 1, 2001 - v1
Checksum:iAC81CB184EC3B043
GO
Isoform 2 (identifier: Q9H0X4-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     516-540: VRDLVPSSRVVRLGEGGPDSDQAIR → AHTGRQRRGSWTGQSSRRDLHVRVL
     541-552: Missing.

Note: No experimental confirmation available.
Show »
Length:540
Mass (Da):58,388
Checksum:i4031F2348BA6637E
GO

Sequence cautioni

The sequence AAK61220 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti20K → E in BAB71374 (PubMed:14702039).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_020121516 – 540VRDLV…DQAIR → AHTGRQRRGSWTGQSSRRDL HVRVL in isoform 2. 1 PublicationAdd BLAST25
Alternative sequenceiVSP_020122541 – 552Missing in isoform 2. 1 PublicationAdd BLAST12

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL136542 mRNA. Translation: CAB66477.1.
AK057165 mRNA. Translation: BAB71374.1.
AE006462 Genomic DNA. Translation: AAK61220.1. Sequence problems.
CH471112 Genomic DNA. Translation: EAW85846.1.
CH471112 Genomic DNA. Translation: EAW85847.1.
BC010521 mRNA. Translation: AAH10521.1.
BC013047 mRNA. Translation: AAH13047.1.
BC032112 mRNA. Translation: AAH32112.1.
CCDSiCCDS10402.1. [Q9H0X4-1]
RefSeqiNP_001271426.1. NM_001284497.1. [Q9H0X4-1]
NP_114428.1. NM_032039.3. [Q9H0X4-1]
XP_005255679.1. XM_005255622.1. [Q9H0X4-1]
XP_011520993.1. XM_011522691.1. [Q9H0X4-1]
XP_011520994.1. XM_011522692.1. [Q9H0X4-1]
XP_016879249.1. XM_017023760.1. [Q9H0X4-1]
XP_016879250.1. XM_017023761.1. [Q9H0X4-1]
XP_016879251.1. XM_017023762.1. [Q9H0X4-1]
UniGeneiHs.513225.

Genome annotation databases

EnsembliENST00000301678; ENSP00000301678; ENSG00000167930. [Q9H0X4-1]
ENST00000301679; ENSP00000301679; ENSG00000167930. [Q9H0X4-2]
ENST00000399932; ENSP00000382814; ENSG00000167930. [Q9H0X4-1]
GeneIDi83986.
KEGGihsa:83986.
UCSCiuc002cgf.4. human. [Q9H0X4-1]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiF234A_HUMAN
AccessioniPrimary (citable) accession number: Q9H0X4
Secondary accession number(s): D3DU45
, Q7L416, Q96FR1, Q96MC7, Q96S30
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: March 1, 2001
Last modified: July 5, 2017
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 16
    Human chromosome 16: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families