Reviewed,
UniProtKB/Swiss-Prot Q9GZV1 (ANKR2_HUMAN)
Last modified
November 24, 2009.
Version 77.
History...
Clusters with 100%,
90%,
50% identity |
Documents (5) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Ankyrin repeat domain-containing protein 2 Alternative name(s): Skeletal muscle ankyrin repeat protein Short name=hArpp | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 360 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | May play an important role in skeletal muscle hypertrophy. |
| Subunit structure | Interacts with TTN/titin. Ref.2 |
| Tissue specificity | Expressed in skeletal and cardiac muscles. Found in slow fibers. Also expressed in kidney, but to a lower extent. Ref.1 Ref.6 |
| Sequence similarities | Contains 5 ANK repeats. |
| Sequence caution | The sequence AK056990 differs from that shown. Reason: Erroneous termination at position 210. Translated as Gln. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | ANK repeat Repeat |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | muscle contraction Ref.7 Non-traceable author statement. Source: UniProtKB muscle organ development Ref.1Non-traceable author statement. Source: UniProtKB |
| Molecular function | structural constituent of muscle Ref.1 Non-traceable author statement. Source: UniProtKB |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9GZV1-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9GZV1-2) The sequence of this isoform differs from the canonical sequence as follows: 246-278: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 360 | 360 | Ankyrin repeat domain-containing protein 2 | PRO_0000066897 | |||||
Regions | |||||||||
| Repeat | 147 – 176 | 30 | ANK 1 | ||||||
| Repeat | 180 – 209 | 30 | ANK 2 | ||||||
| Repeat | 213 – 242 | 30 | ANK 3 | ||||||
| Repeat | 246 – 275 | 30 | ANK 4 | ||||||
| Repeat | 279 – 308 | 30 | ANK 5 | ||||||
Natural variations | |||||||||
| Alternative sequence | 246 – 278 | 33 | Missing in isoform 2. | VSP_000269 | |||||
| Natural variant | 62 | 1 | A → T: dbSNP rs7094973. Ref.2 Ref.1 Ref.6 Ref.3 | VAR_042498 | |||||
Experimental info | |||||||||
| Sequence conflict | 49 | 1 | L → S in CAB99416. Ref.7 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Characterization of human skeletal muscle Ankrd2." Pallavicini A., Kojic S., Bean C., Vainzof M., Salamon M., Ievolella C., Bortoletto G., Pacchioni B., Zatz M., Lanfranchi G., Faulkner G., Valle G. Biochem. Biophys. Res. Commun. 285:378-386(2001) [PubMed: 11444853] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 1), NUCLEOTIDE SEQUENCE [MRNA] OF 25-360 (ISOFORM 1), VARIANT THR-62, TISSUE SPECIFICITY. Tissue: Skeletal muscle. |
| [2] | "The muscle ankyrin repeat proteins: CARP, ankrd2/Arpp and DARP as a family of titin filament-based stress response molecules." Miller M.K., Bang M.-L., Witt C.C., Labeit D., Trombitas C., Watanabe K., Granzier H., McElhinny A.S., Gregorio C.C., Labeit S. J. Mol. Biol. 333:951-964(2003) [PubMed: 14583192] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], INTERACTION WITH TTN, VARIANT THR-62. Tissue: Heart. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT THR-62. Tissue: Skeletal muscle. |
| [4] | "The DNA sequence and comparative analysis of human chromosome 10." Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. Rogers J.Nature 429:375-381(2004) [PubMed: 15164054] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Skeletal muscle. |
| [6] | "Identification of a novel human ankyrin-repeated protein homologous to CARP." Moriyama M., Tsukamoto Y., Fujiwara M., Kondo G., Nakada C., Baba T., Ishiguro N., Miyazaki A., Nakamura K., Hori N., Sato K., Shomori K., Takeuchi K., Satoh H., Mori S., Ito H. Biochem. Biophys. Res. Commun. 285:715-723(2001) [PubMed: 11453652] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 25-360 (ISOFORM 1), TISSUE SPECIFICITY, VARIANT THR-62. |
| [7] | "Identification of Ankrd2, a novel skeletal muscle gene coding for a stretch-responsive ankyrin-repeat protein." Kemp T.J., Sadusky T.J., Saltisi F., Carey N., Moss J., Yang S.Y., Sassoon D.A., Goldspink G., Coulton G.R. Genomics 66:229-241(2000) [PubMed: 10873377] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 49-150. Tissue: Skeletal muscle. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AJ304805 mRNA. Translation: CAC19412.1. Different initiation. AJ304804 Genomic DNA. Translation: CAC19411.1. Different initiation. AJ583444 mRNA. Translation: CAE47432.1. Different initiation. AK056990 mRNA. No translation available. AL359388, AL355315 Genomic DNA. Translation: CAI14194.1. Different initiation. AL355315, AL359388 Genomic DNA. Translation: CAI15463.1. Different initiation. BC020817 mRNA. Translation: AAH20817.2. Different initiation. BC107759 mRNA. Translation: AAI07760.1. AB058599 mRNA. Translation: BAB60958.1. Different initiation. AJ249975 mRNA. Translation: CAB99416.1. | |
| IPI | IPI00418217. IPI00514352. |
| PIR | JC7713. |
| RefSeq | NP_001123453.1. NP_065082.2. |
| UniGene | Hs.73708 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q9GZV1. |
Proteomic databases | |
| PRIDE | Q9GZV1. |
Genome annotation databases | |
| Ensembl | ENST00000307518; ENSP00000306163; ENSG00000165887; Homo sapiens. [Genome view] |
| GeneID | 26287. |
| KEGG | hsa:26287. |
| UCSC | uc001knw.1. human. |
Organism-specific databases | |
| CTD | 26287. |
| GeneCards | GC10P099322. |
| H-InvDB | HIX0009094. |
| HGNC | HGNC:495. ANKRD2. |
| MIM | 610734. gene. |
| PharmGKB | PA24804. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOVERGEN | Q9GZV1. |
| OMA | DEKHHGA |
| OrthoDB | EOG9HDWCW |
Gene expression databases | |
| ArrayExpress | Q9GZV1. |
| Bgee | Q9GZV1. |
| CleanEx | HS_ANKRD2. |
| Genevestigator | Q9GZV1. |
| GermOnline | ENSG00000165887. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR002110. Ankyrin_rpt. IPR020683. Ankyrin_rpt-contain_dom. [Graphical view] |
| Gene3D | G3DSA:1.25.40.20. ANK. 1 hit. |
| Pfam | PF00023. Ank. 4 hits. [Graphical view] |
| SMART | SM00248. ANK. 5 hits. [Graphical view] |
| PROSITE | PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 4 hits. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 48621. |
| SOURCE | Search... |
Entry information
| Entry name | ANKR2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9GZV1 Secondary accession number(s): Q3B778 Q9NQC9 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 10 Human chromosome 10: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


