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Unreviewed, UniProtKB/TrEMBL Q9GZV0 (Q9GZV0_HUMAN)

Last modified January 19, 2010. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    cDNA FLJ12454 fis, clone NT2RM1000555, highly similar to UNR PROTEIN EMBL BAB14073.1
Submitted name:
    cDNA FLJ12466 fis, clone NT2RM1000826, highly similar to UNR PROTEIN EMBL BAB14080.1
OrganismHomo sapiens (Human) EMBL BAB14080.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

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Protein attributes

Sequence length767 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Sequence similarities

Contains 5 CSD (cold-shock) domains.

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Ontologies

Gene Ontology (GO)
   Biological processregulation of transcription, DNA-dependent

Inferred from electronic annotation. Source: InterPro

   Cellular componentmitochondrial inner membrane

Inferred from electronic annotation. Source: Compara

   Molecular functionDNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
Q9GZV0-1 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 6E4D14A6D9F68018

FASTA76785,730
        10         20         30         40         50         60 
MSFDPNLLHN NGHNGYPNGT SAALRETGVI VKLLTSYGFI QCSERQARLF FHCSQYNGNL 

        70         80         90        100        110        120 
QDLKVGDDVE FEVSSDRRTG KPIAVKLVKI KQEILPEERM NGQEVFYLTY TPEDVEGNVQ 

       130        140        150        160        170        180 
LETGDKINFV IDNNKHTGAV SARNIMLLKK KQARCQGVVC AMKEAFGFIE RGDVVKEIFF 

       190        200        210        220        230        240 
HYSEFKGDLE TLQPGDDVEF TIKDRNGKEV ATDVRLLPQG TVIFEDISIE HFEGTVTKVI 

       250        260        270        280        290        300 
PKVPSKNQND PLPGRIKVDF VIPKELPFGD KDTKSKVTLL EGDHVRFNIS TDRRDKLERA 

       310        320        330        340        350        360 
TNIEVLSNTF QFTNEAREMG VIAAMRDGFG FIKCVDRDVR MFFHFSEILD GNQLHIADEV 

       370        380        390        400        410        420 
EFTVVPDMLS AQRNHAIRIK KLPKGTVSFH SHSDHRFLGT VEKEATFSNP KTTSPNKGKE 

       430        440        450        460        470        480 
KEAEDGIIAY DDCGVKLTIA FQAKDVEGST SPQIGDKVEF SISDKQRPGQ QVATCVRLLG 

       490        500        510        520        530        540 
RNSNSKRLLG YVATLKDNFG FIETANHDKE IFFHYSEFSG DVDSLELGDM VEYSLSKGKG 

       550        560        570        580        590        600 
NKVSAEKVNK THSVNGITEE ADPTIYSGKV IRPLRSVDPT QNEYQGMIEI VEEGDMKGEV 

       610        620        630        640        650        660 
YPFGIVGMAN KGDCLQKGES VKFQLCVLGQ NAQTMAYNIT PLRRATVECV KDQFGFINYE 

       670        680        690        700        710        720 
VGDSKKLFFH VKEVQDGIEL QAGDEVEFSV ILNQRTGKCS ACNVWRVCEG PKAVAAPRPD 

       730        740        750        760 
RLVNRLKNIT LDDASAPRLM VLRQPRGPDN SMGFGAERKI RQAGVID

« Hide

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References

[1]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK022516 mRNA. Translation: BAB14073.1.
AK022528 mRNA. Translation: BAB14080.1.
IPIIPI00470891.
UniGeneHs.69855

3D structure databases

SMRQ9GZV0. Positions 16-90, 141-228, 314-393, 477-551, 642-713.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9GZV0.

Genome annotation databases

EnsemblENST00000261443; ENSP00000261443; ENSG00000009307; Homo sapiens. [Genome view]
ENST00000339438; ENSP00000342408; ENSG00000009307; Homo sapiens. [Genome view]
ENST00000369530; ENSP00000358543; ENSG00000009307; Homo sapiens. [Genome view]
ENST00000369533; ENSP00000358546; ENSG00000009307; Homo sapiens. [Genome view]
ENST00000438362; ENSP00000407724; ENSG00000009307; Homo sapiens. [Genome view]

Organism-specific databases

HGNCHGNC:29905. CSDE1.

Phylogenomic databases

HOVERGENQ9GZV0.

Gene expression databases

ArrayExpressQ9GZV0.
BgeeQ9GZV0.

Family and domain databases

InterProIPR019844. Cold-shock_CS.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA_bd.
IPR016027. NA-bd_OB-fold-like.
[Graphical view]
PfamPF00313. CSD. 5 hits.
[Graphical view]
SMARTSM00357. CSP. 5 hits.
[Graphical view]
PROSITEPS00352. COLD_SHOCK. 4 hits.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameQ9GZV0_HUMAN
AccessionPrimary (citable) accession number: Q9GZV0
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: January 19, 2010
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information