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Q9GU53 (Q9GU53_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

LD28881p EMBL AAT94496.1

NFAT, isoform D EMBL ACZ95281.1
Gene names
Name:NFAT FlyBase FBgn0030505 EMBL ACZ95281.1
Synonyms:dNFAT EMBL AAG28468.1
ORF Names:CG11172 FlyBase FBgn0030505, Dmel_CG11172 EMBL ACZ95281.1
OrganismDrosophila melanogaster (Fruit fly) EMBL AAG28468.1
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length1210 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 RHD (Rel-like) domain. RuleBase RU003997

Sequences

Sequence LengthMass (Da)Tools
Q9GU53 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 99861D542A420D0F

FASTA1,210127,916
        10         20         30         40         50         60 
MLLKFTKTSG AGPSAVPLLT TAPATVTSSA SMQATTTSYA ARGTGMRMTM STNSTMSARI 

        70         80         90        100        110        120 
HRKGFRIPSK RQPGKGLPGK LHTITRTGPG KMVPGKRIPQ RPHPPPCDNS NDSGLGFDQH 

       130        140        150        160        170        180 
TELRSSAGAG GVTDPAANGG SGSNSGQRSS LLVNSALTNT VAAAAAAAAA AVASNTLQQH 

       190        200        210        220        230        240 
QQHHQQQQQQ QQQQQQQQQQ QQQQQQQQQH SPQQHLIRAI PVSRFISARN VTRVANKRQP 

       250        260        270        280        290        300 
TTPLNSVASS NDGQVQLEIL SQPEQQHRAR YQTEGSRGAV KDRSGNGFPI VRLTGYDKVA 

       310        320        330        340        350        360 
VLQVFIGTDI GRVAPHMFYQ ACKVAGKNST QCNEKKVDGT MVIEIDFKPE TDMTITCDCV 

       370        380        390        400        410        420 
GILKERNVDV EHRFPEHLAQ KNKKKSTRCR MVFRTQLTRD DGTTETLQVC SNPIICTQPP 

       430        440        450        460        470        480 
GVPEICKKSL NSCPVDGGLE LFIIGKNFLK DTHVVFQETY DSVNGDDPAT EIAVRQQLIG 

       490        500        510        520        530        540 
GTAALWEQSV LPDKEYLHQT HLICTVPPYL HQNILKPVQV QVSIVSSGKK SEPHTFTYTA 

       550        560        570        580        590        600 
KGQYTTLAAA STLSNTIHAQ DVSGFMDTTS ASNASGSSGW SAAGGSGNNT STGDNVEAKH 

       610        620        630        640        650        660 
EIDSGMMPPP ITTQIPMGVR RSSLPSVTPM ITDQQLVHLN AVAASAEALK TELDDSNSHS 

       670        680        690        700        710        720 
PLTGESTPDS PNAALQYHRF ARKPSLDTIM YDQSNSLPGF PTVVAPATAA AVAAAVDIDP 

       730        740        750        760        770        780 
TAVAVAVELA VKNEIVKHVV QQHQQMQEQM HEQQQQQQQQ QQQQQQQQQQ QPQQQQQQQV 

       790        800        810        820        830        840 
HKFIDELTKS TSVVSSNGTT EPALFTTSAV IDHALTDILQ AKVGIAPPNV VLERSLSLSS 

       850        860        870        880        890        900 
TNSSSSMSGS ESSPNSSPLT QDIILNSEPA AALAGAAALG GPAPVDVTGG LSTDIIMNPA 

       910        920        930        940        950        960 
VSPSTILCSA NGAATAVVPN ILAPHQVTMA NSILNDIAMQ PEPTQQDAAV AALALSNIMM 

       970        980        990       1000       1010       1020 
SPPTAASGVG VGDTLPPTPA TMQPEVAATA TSTAVSNMII KAAADFITTQ EQEQHHYHHH 

      1030       1040       1050       1060       1070       1080 
GRIHSHSPQA AVGVSGNPAE TASDPLVDLL LNHSNTPETA AAAAAAVAVE AANFQSMNHS 

      1090       1100       1110       1120       1130       1140 
HHSHHGHHGH SHGHGHSRVT GHVSGHVTSH HRGHHLPVVP PTPQESLIVA LASENALQKS 

      1150       1160       1170       1180       1190       1200 
VATAAVTTNG AVMTQQASAP NTAGSILPAA VGAVAAAAAV AVQPPIPQEL TTMSDQDLIS 

      1210 
YINPSTFDQL 

« Hide

References

« Hide 'large scale' references
[1]"The Release 5.1 annotation of Drosophila melanogaster heterochromatin."
Smith C.D., Shu S., Mungall C.J., Karpen G.H.
Science 316:1586-1591(2007) [PubMed: 17569856] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Sequence finishing and mapping of Drosophila melanogaster heterochromatin."
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M., Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A., Dimitri P., Karpen G.H., Celniker S.E.
Science 316:1625-1628(2007) [PubMed: 17569867] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[4]"Combined evidence annotation of transposable elements in genome sequences."
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.
PLoS Comput. Biol. 1:166-175(2005) [PubMed: 16110336] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[6]"Heterochromatic sequences in a Drosophila whole-genome shotgun assembly."
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H.
Genome Biol. 3:RESEARCH0085.1-RESEARCH0085.16(2002) [PubMed: 12537574] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[7]"The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective."
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J.W., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E.
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002) [PubMed: 12537573] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[8]"Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence."
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A., Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A., George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R., Pacleb J.M., Park S. expand/collapse author list , Pfeiffer B.D., Richards S., Sodergren E.J., Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C., Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.
Genome Biol. 3 (12), RESEARCH0079 (2002)
Cited for: NUCLEOTIDE SEQUENCE.
[9]Drosophila Heterochromatin Genome Project
Smith C.D., Shu S., Mungall C.J., Karpen G.H.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[10]FlyBase
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[11]"Drosophila melanogaster release 4 sequence."
Berkeley Drosophila Genome Project
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C., Rubin G.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[12]Celniker S., Carlson J., Kennedy C., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Karpen G.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[13]Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Rubin G.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[14]"Full length Drosophila melanogaster cDNA sequence."
Huang A.M., Rubin G.M., Tsang G., Evans-Holm M., Suh C.
Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[15]Stapleton M., Carlson J., Frise E., Kapadia B., Park S., Wan K., Yu C., Celniker S.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAT94496.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF195496 mRNA. Translation: AAG28468.1.
BT015267 mRNA. Translation: AAT94496.1.
AE014298 Genomic DNA. Translation: ACZ95281.1.
RefSeqNP_001162746.1. NM_001169275.1.
UniGeneDm.2918.

3D structure databases

HSSPHSSP built from PDB template 1IMH based on UniProtKB O94916.
ProteinModelPortalQ9GU53.
SMRQ9GU53. Positions 239-541.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9GU53.

Proteomic databases

PRIDEQ9GU53.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0301450; FBpp0290665; FBgn0030505.
GeneID32321.
KEGGdme:Dmel_CG11172.

Organism-specific databases

CTD32321.
FlyBaseFBgn0030505. NFAT.

Phylogenomic databases

GeneTreeEMGT00050000001488.
InParanoidQ9GU53.

Gene expression databases

ArrayExpressQ9GU53.
BgeeQ9GU53.

Family and domain databases

InterProIPR011989. ARM-like.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002909. IPT_TIG_rcpt.
IPR008366. NFAT.
IPR008967. p53-like_TF_DNA-bd.
IPR011539. RHD.
[Graphical view]
Gene3DG3DSA:1.25.10.10. ARM-like. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
G3DSA:2.60.40.340. RHD. 1 hit.
KOK04446.
PANTHERPTHR12533. NFAT. 1 hit.
PfamPF00554. RHD. 1 hit.
PF01833. TIG. 1 hit.
[Graphical view]
SMARTSM00429. IPT. 1 hit.
[Graphical view]
SUPFAMSSF81296. Ig_E-set. 1 hit.
SSF49417. P53_like_DNA_bnd. 1 hit.
PROSITEPS50254. REL_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9GU53_DROME
AccessionPrimary (citable) accession number: Q9GU53
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: January 25, 2012
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)