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Q9GQC4 (Q9GQC4_BOMMO) Unreviewed, UniProtKB/TrEMBL

Last modified September 21, 2011. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismBombyx mori (Silk moth) EMBL AAG37105.1
Taxonomic identifier7091 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaLepidopteraGlossataDitrysiaBombycoideaBombycidaeBombycinaeBombyx

Protein attributes

Sequence length544 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q9GQC4 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 89872DFC1DA23753

FASTA54461,069
        10         20         30         40         50         60 
MRAIFATLAV LASCAALVQC ADSRARIVCY FSNWAVYRPG VGRYGIEDIP VDLCTHLIYS 

        70         80         90        100        110        120 
FIGVTEKSSE VLIIDPELDV DKSGFRNFTS LRSKHPDVKF MVAVGGWAEG GSKYSHMVAQ 

       130        140        150        160        170        180 
KSTRMSFIRS VVDFLKKYDF DGLDLDWEYP GAADRGGSFS DKDEFLYFVQ ELKRAFIRAD 

       190        200        210        220        230        240 
RGWELTAAVP LANFRLMEGY HVPELCQELD AIHVMSYDLR GNWAGFADVH SPLYKRPHDQ 

       250        260        270        280        290        300 
WAYEKLNVND GLNLWEEKGC PTNKLVVGIP FYGRSFTLSA GNNNYGLGTY INKEAGGGDP 

       310        320        330        340        350        360 
APYTNATGFW AYYEICTEVD ADGSGWTKKW DEFGKCPYAY KGTQWVGYED PRSVEIKMNW 

       370        380        390        400        410        420 
IKEKGYLGAM TWAIDMDDFK GLCGEENPLI KLLHKHMSTY TVPPARTGHA TPTPEWARPP 

       430        440        450        460        470        480 
STPSDPSEGD PIPTTTTTTV KPTTTRTTAR PTTTTTKVPH GTTEEDFDIN VRPEVEEPPT 

       490        500        510        520        530        540 
ENEVDNADVC NSEDDYVPDK KECSKYWRCV NGEGVQFSCQ PGTIFNVKLN VCDWPENTDR 


PECS 

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References

[1]"The chitinase gene of the silkworm, Bombyx mori, contains a novel Tc-like transposable element."
Mikitani K., Sugasaki T., Shimada T., Kobayashi M., Gustafsson J.A.
J. Biol. Chem. 275:37725-37732(2000) [PubMed: 10984482] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Shunrei x Showgetsu EMBL AAG37105.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF273695 mRNA. Translation: AAG37105.1.
RefSeqNP_001166832.1. NM_001173361.1.
UniGeneBmo.13127.

3D structure databases

HSSPHSSP built from PDB template 1LG2 based on UniProtKB Q13231.
ProteinModelPortalQ9GQC4.
ModBaseSearch...

Protein family/group databases

CAZyCBM14. Carbohydrate-Binding Module Family 14.
GH18. Glycoside Hydrolase Family 18.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID693039.

Organism-specific databases

CTD37837.

Family and domain databases

InterProIPR002557. Chitin-bd_dom.
IPR011583. Chitinase_II.
IPR001223. Glyco_hydro18cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:2.170.140.10. Chitin-bd_dom. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
PfamPF01607. CBM_14. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
[Graphical view]
SMARTSM00494. ChtBD2. 1 hit.
SM00636. Glyco_18. 1 hit.
[Graphical view]
SUPFAMSSF57625. Chitin_bind_PerA. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS50940. CHIT_BIND_II. 1 hit.
PS01095. CHITINASE_18. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9GQC4_BOMMO
AccessionPrimary (citable) accession number: Q9GQC4
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: September 21, 2011
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)