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Protein
Submitted name:

CDw150

Gene

CDw150

Organism
Saguinus oedipus (Cotton-top tamarin)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
CDw150Imported
Submitted name:
Signaling lymphocytic activation molecule 1Imported
Gene namesi
Name:CDw150Imported
OrganismiSaguinus oedipus (Cotton-top tamarin)Imported
Taxonomic identifieri9490 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeSaguinus

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei240 – 26122HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence analysisAdd
BLAST
Chaini25 – 336312Sequence analysisPRO_5005942870Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi32 ↔ 132Combined sources

Interactioni

Protein-protein interaction databases

DIPiDIP-59071N.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ALWX-ray3.55A26-140[»]
3ALXX-ray3.15A/B/C/D26-140[»]
3ALZX-ray4.51B1-140[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini144 – 22380Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOVERGENiHBG054224.

Family and domain databases

InterProiIPR007110. Ig-like_dom.
IPR010407. Sig_lymph_act_molc_N.
[Graphical view]
PfamiPF06214. SLAM. 1 hit.
[Graphical view]
ProDomiPD090491. Sig_lymph_act_molc_N. 1 hit.
[Graphical view] [Entries sharing at least one domain]
PROSITEiPS50835. IG_LIKE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9GJT3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPKGLFSLT FVLFLSLAFE PSYGTGGRMM NCPKIVQQLG SDVLLPLTHE
60 70 80 90 100
RINTSMNKSI HIVVTMAKSL ENSVENKIVS LDPSEAGPPR YLKDRYRFYL
110 120 130 140 150
ENLSLAIRES TKKDEGWYFM TLEKNISVQR FCLHLKLYEQ VSTPEIKVLN
160 170 180 190 200
KTQENGTCTL ILGCIVKKGD HVAYSWSEKA GTHPLSPANS SHLLSLTLGP
210 220 230 240 250
QHAKNIYVCT VSNPISNSSQ DFIPWLRCRQ EPSETNIWPV YAWLSLAGVI
260 270 280 290 300
IILIVIAIML LRRRGKTDHY QTTTEKKNLT IYAQVQKPGP LQKKLDSFPA
310 320 330
QDPCTTIYVA ATEPVPEPVQ ETNSITVYAS VTLPES
Length:336
Mass (Da):37,717
Last modified:March 1, 2001 - v1
Checksum:i5D5B4ED7FDAEA764
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF257239 mRNA. Translation: AAG02017.1.
AF302038 mRNA. Translation: AAG18445.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF257239 mRNA. Translation: AAG02017.1.
AF302038 mRNA. Translation: AAG18445.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ALWX-ray3.55A26-140[»]
3ALXX-ray3.15A/B/C/D26-140[»]
3ALZX-ray4.51B1-140[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-59071N.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG054224.

Family and domain databases

InterProiIPR007110. Ig-like_dom.
IPR010407. Sig_lymph_act_molc_N.
[Graphical view]
PfamiPF06214. SLAM. 1 hit.
[Graphical view]
ProDomiPD090491. Sig_lymph_act_molc_N. 1 hit.
[Graphical view] [Entries sharing at least one domain]
PROSITEiPS50835. IG_LIKE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Structure of the measles virus hemagglutinin bound to its cellular receptor SLAM."
    Hashiguchi T., Ose T., Kubota M., Maita N., Kamishikiryo J., Maenaka K., Yanagi Y.
    Nat. Struct. Mol. Biol. 18:135-141(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.15 ANGSTROMS) OF 26-140, DISULFIDE BONDS.

Entry informationi

Entry nameiQ9GJT3_SAGOE
AccessioniPrimary (citable) accession number: Q9GJT3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: January 20, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.