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Protein
Submitted name:

MADS-box protein AGL102

Gene

AGL102

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MADS-box protein AGL102Imported
Submitted name:
Protein agamous-like 102Imported
Submitted name:
T2E6.17Imported
Gene namesi
Name:AGL102Imported
Ordered Locus Names:At1g47760Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRilocus:2202420. AT1G47760.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G47760.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili78 – 108Sequence analysisAdd BLAST31

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
HOGENOMiHOG000152598.
OMAiNIPYTYG.
OrthoDBiEOG093618DR.

Family and domain databases

CDDicd00265. MADS_MEF2_like. 1 hit.
InterProiView protein in InterPro
IPR033896. MADS_MEF2-like.
IPR002100. TF_MADSbox.
PfamiView protein in Pfam
PF00319. SRF-TF. 1 hit.
PRINTSiPR00404. MADSDOMAIN.
SMARTiView protein in SMART
SM00432. MADS. 1 hit.
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiView protein in PROSITE
PS50066. MADS_BOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9FZF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRRKIEIKF IEDSIERKAT FSRRRNGIFK KADELAKLCN VEIAVLVISP
60 70 80 90 100
TNIPYTYGYP CFNDVVERIQ NPSASSKLRS LMKELEQIKE FQEDLRKKQQ
110 120 130 140 150
RNLEKSNMKE NVDLKLEDLV AFKAKLEAYQ AGLKRKHVEM EDLSSPSILS
160 170 180
KNTKNKMMRT EYSSGQSKGM YEFRAFGPGF LGTI
Length:184
Mass (Da):21,283
Last modified:March 1, 2001 - v1
Checksum:i985EA0CC3ACF3580
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC012463 Genomic DNA. Translation: AAF99799.1.
AY141241 mRNA. Translation: AAN52805.1.
CP002684 Genomic DNA. Translation: AEE32209.1.
RefSeqiNP_175207.1. NM_103669.2.
UniGeneiAt.38560.

Genome annotation databases

EnsemblPlantsiAT1G47760.1; AT1G47760.1; AT1G47760.
GeneIDi841187.
GrameneiAT1G47760.1; AT1G47760.1; AT1G47760.
KEGGiath:AT1G47760.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC012463 Genomic DNA. Translation: AAF99799.1.
AY141241 mRNA. Translation: AAN52805.1.
CP002684 Genomic DNA. Translation: AEE32209.1.
RefSeqiNP_175207.1. NM_103669.2.
UniGeneiAt.38560.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G47760.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G47760.1; AT1G47760.1; AT1G47760.
GeneIDi841187.
GrameneiAT1G47760.1; AT1G47760.1; AT1G47760.
KEGGiath:AT1G47760.

Organism-specific databases

AraportiAT1G47760.
TAIRilocus:2202420. AT1G47760.

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
HOGENOMiHOG000152598.
OMAiNIPYTYG.
OrthoDBiEOG093618DR.

Family and domain databases

CDDicd00265. MADS_MEF2_like. 1 hit.
InterProiView protein in InterPro
IPR033896. MADS_MEF2-like.
IPR002100. TF_MADSbox.
PfamiView protein in Pfam
PF00319. SRF-TF. 1 hit.
PRINTSiPR00404. MADSDOMAIN.
SMARTiView protein in SMART
SM00432. MADS. 1 hit.
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiView protein in PROSITE
PS50066. MADS_BOX_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9FZF2_ARATH
AccessioniPrimary (citable) accession number: Q9FZF2
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: March 15, 2017
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.