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Protein
Submitted name:

MADS-box protein AGL102

Gene

AGL102

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MADS-box protein AGL102Imported
Submitted name:
Protein agamous-like 102Imported
Submitted name:
T2E6.17Imported
Gene namesi
Name:AGL102Imported
Ordered Locus Names:At1g47760Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G47760.

Subcellular locationi

  • Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

IntActiQ9FZF2. 3 interactors.
STRINGi3702.AT1G47760.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili78 – 108Sequence analysisAdd BLAST31

Sequence similaritiesi

Contains 1 MADS-box domain.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
HOGENOMiHOG000152598.
OMAiNIPYTYG.
OrthoDBiEOG093618DR.

Family and domain databases

CDDicd00265. MADS_MEF2_like. 1 hit.
InterProiIPR033896. MADS_MEF2-like.
IPR002100. TF_MADSbox.
[Graphical view]
PfamiPF00319. SRF-TF. 1 hit.
[Graphical view]
PRINTSiPR00404. MADSDOMAIN.
SMARTiSM00432. MADS. 1 hit.
[Graphical view]
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiPS50066. MADS_BOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9FZF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRRKIEIKF IEDSIERKAT FSRRRNGIFK KADELAKLCN VEIAVLVISP
60 70 80 90 100
TNIPYTYGYP CFNDVVERIQ NPSASSKLRS LMKELEQIKE FQEDLRKKQQ
110 120 130 140 150
RNLEKSNMKE NVDLKLEDLV AFKAKLEAYQ AGLKRKHVEM EDLSSPSILS
160 170 180
KNTKNKMMRT EYSSGQSKGM YEFRAFGPGF LGTI
Length:184
Mass (Da):21,283
Last modified:March 1, 2001 - v1
Checksum:i985EA0CC3ACF3580
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC012463 Genomic DNA. Translation: AAF99799.1.
AY141241 mRNA. Translation: AAN52805.1.
CP002684 Genomic DNA. Translation: AEE32209.1.
RefSeqiNP_175207.1. NM_103669.2.
UniGeneiAt.38560.

Genome annotation databases

EnsemblPlantsiAT1G47760.1; AT1G47760.1; AT1G47760.
GeneIDi841187.
GrameneiAT1G47760.1; AT1G47760.1; AT1G47760.
KEGGiath:AT1G47760.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC012463 Genomic DNA. Translation: AAF99799.1.
AY141241 mRNA. Translation: AAN52805.1.
CP002684 Genomic DNA. Translation: AEE32209.1.
RefSeqiNP_175207.1. NM_103669.2.
UniGeneiAt.38560.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9FZF2. 3 interactors.
STRINGi3702.AT1G47760.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G47760.1; AT1G47760.1; AT1G47760.
GeneIDi841187.
GrameneiAT1G47760.1; AT1G47760.1; AT1G47760.
KEGGiath:AT1G47760.

Organism-specific databases

TAIRiAT1G47760.

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
HOGENOMiHOG000152598.
OMAiNIPYTYG.
OrthoDBiEOG093618DR.

Family and domain databases

CDDicd00265. MADS_MEF2_like. 1 hit.
InterProiIPR033896. MADS_MEF2-like.
IPR002100. TF_MADSbox.
[Graphical view]
PfamiPF00319. SRF-TF. 1 hit.
[Graphical view]
PRINTSiPR00404. MADSDOMAIN.
SMARTiSM00432. MADS. 1 hit.
[Graphical view]
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiPS50066. MADS_BOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9FZF2_ARATH
AccessioniPrimary (citable) accession number: Q9FZF2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: November 30, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.