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Q9FZE0

- BGL40_ARATH

UniProt

Q9FZE0 - BGL40_ARATH

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Protein
Beta-glucosidase 40
Gene
BGLU40, At1g26560, T1K7.7
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei51 – 511Substrate By similarity
Binding sitei152 – 1521Substrate By similarity
Binding sitei197 – 1971Substrate By similarity
Active sitei198 – 1981Proton donor By similarity
Binding sitei341 – 3411Substrate By similarity
Active sitei414 – 4141Nucleophile By similarity
Binding sitei464 – 4641Substrate By similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Enzyme and pathway databases

BioCyciARA:AT1G26560-MONOMER.

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 40 (EC:3.2.1.21)
Short name:
AtBGLU40
Gene namesi
Name:BGLU40
Ordered Locus Names:At1g26560
ORF Names:T1K7.7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G26560.

Subcellular locationi

GO - Cellular componenti

  1. apoplast Source: TAIR
  2. chloroplast Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2929 Reviewed prediction
Add
BLAST
Chaini30 – 510481Beta-glucosidase 40
PRO_0000390313Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi217 ↔ 225 By similarity
Glycosylationi229 – 2291N-linked (GlcNAc...) Reviewed prediction
Glycosylationi278 – 2781N-linked (GlcNAc...) Reviewed prediction
Glycosylationi349 – 3491N-linked (GlcNAc...) Reviewed prediction
Glycosylationi507 – 5071N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiQ9FZE0.
PRIDEiQ9FZE0.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G26560.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9FZE0.
SMRiQ9FZE0. Positions 32-508.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni471 – 4722Substrate binding By similarity

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
HOGENOMiHOG000088630.
InParanoidiQ9FZE0.
KOiK01188.
OMAiMISYQIL.
PhylomeDBiQ9FZE0.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9FZE0-1 [UniParc]FASTAAdd to Basket

« Hide

MAHRRLIMTM TKMMMMVTMM MMMDKTCICA DISRGSFPKG FVFGTASSAF    50
QHEGAVKAEG RGPTIWDTFS HTFGKITDFS NADVAVDQYH RYEEDVQLMK 100
NMGMDAYRFS ISWTRIFPNG VGHINEAGID HYNKLINALL AKGIEPYVTL 150
YHWDLPQALH DRYLGWLNPQ IINDFAAYAE VCFQRFGDRV KHWITFNEPH 200
TFAIQGYDVG LQAPGRCTIL FKLTCREGNS STEPYIVGHN VILTHATVSD 250
IYRKKYKAKQ GGSLGIAFDV MWFEPESNKT EDIEAAQRAQ DFQLGWFLDP 300
LMFGDYPSSM RSRVGSRLPV FTGSQSSLVK GSLDFVGINH YTTYYARNNA 350
TNLIGTLLHD AVSDSGTVTL PFKGLSTIGD RASSIWLYIV PRGMRSLMNY 400
IKHRYGNPPV FITENGMDDP NSILISRKDA LKDAKRIKYH HDYLSSLQAS 450
IKEDGCNVKG YFVWSLLDNW EWAAGYSSRF GLYFVDYRDN LKRYPKDSVH 500
WFTSFLNSTS 510
Length:510
Mass (Da):58,125
Last modified:March 1, 2001 - v1
Checksum:i101D3E0E2BB20914
GO

Sequence cautioni

The sequence AAM61600.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC013427 Genomic DNA. Translation: AAF98564.1.
CP002684 Genomic DNA. Translation: AEE30704.1.
AY045927 mRNA. Translation: AAK76601.1.
AY142610 mRNA. Translation: AAN13179.1.
AY085043 mRNA. Translation: AAM61600.1. Different initiation.
AK221011 mRNA. Translation: BAD94684.1.
PIRiF86392.
RefSeqiNP_173978.1. NM_102418.3.
UniGeneiAt.15959.

Genome annotation databases

EnsemblPlantsiAT1G26560.1; AT1G26560.1; AT1G26560.
GeneIDi839196.
KEGGiath:AT1G26560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC013427 Genomic DNA. Translation: AAF98564.1 .
CP002684 Genomic DNA. Translation: AEE30704.1 .
AY045927 mRNA. Translation: AAK76601.1 .
AY142610 mRNA. Translation: AAN13179.1 .
AY085043 mRNA. Translation: AAM61600.1 . Different initiation.
AK221011 mRNA. Translation: BAD94684.1 .
PIRi F86392.
RefSeqi NP_173978.1. NM_102418.3.
UniGenei At.15959.

3D structure databases

ProteinModelPortali Q9FZE0.
SMRi Q9FZE0. Positions 32-508.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT1G26560.1-P.

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Proteomic databases

PaxDbi Q9FZE0.
PRIDEi Q9FZE0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G26560.1 ; AT1G26560.1 ; AT1G26560 .
GeneIDi 839196.
KEGGi ath:AT1G26560.

Organism-specific databases

TAIRi AT1G26560.

Phylogenomic databases

eggNOGi COG2723.
HOGENOMi HOG000088630.
InParanoidi Q9FZE0.
KOi K01188.
OMAi MISYQIL.
PhylomeDBi Q9FZE0.

Enzyme and pathway databases

BioCyci ARA:AT1G26560-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Full-length cDNA from Arabidopsis thaliana."
    Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
    Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  5. "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
    Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.
    , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
    Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 351-510.
    Strain: cv. Columbia.
  6. Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL40_ARATH
AccessioniPrimary (citable) accession number: Q9FZE0
Secondary accession number(s): Q56ZF5, Q8LF56
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: March 1, 2001
Last modified: May 14, 2014
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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