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Q9FZD0 (Q9FZD0_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Carbohydrate-binding X8 domain-containing protein EMBL AEE30693.1

Predicted GPI-anchored protein EMBL BAF00161.1

T1K7.18 protein EMBL AAF98573.1
Gene names
Name:T1K7.18 EMBL AAF98573.1
Ordered Locus Names:At1g26450 TAIR At1g26450 EMBL BAF00161.1
ORF Names:AT1G26450 EMBL AEE30693.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAF98573.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length197 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentanchored to membrane

Traceable author statement. Source: TAIR

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9FZD0 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: DC03B8BAD551081B

FASTA19720,039
        10         20         30         40         50         60 
MAVLLPLFLL SFMFTYSNAA VCVCKDANEL DLQKVIDFAC GGGADCAQIQ TTGACYQPNT 

        70         80         90        100        110        120 
LKNHCDVAVN SYYQKKASTG ATCDFNGAAV ISTSPPSTTS SCLSSSSSNG TPTAGYPSTG 

       130        140        150        160        170        180 
NSTTASPGTT NPSTGNSTNS TLPTNDKPTS STITFPDSTT MGPSSSTSGD PNGGEELSVR 

       190 
TTTIILLTTI AAVALRV 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed: 11130712] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis ORF clones."
Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. expand/collapse author list , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[4]"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K. expand/collapse author list , Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]"The sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1."
Sakano H., Liu S.X., Yu G., Lee J.M., Lenz C., Pham P., Toriumi M., Chin C., Chiou J., Choi E., Chung M., Gonzalez A., Howng B., Liu A., Vaysberg M., Altafi H., Brooks S., Buehler E. expand/collapse author list , Chao Q., Conn L., Conway A.B., Hansen N.F., Johnson-Hopson C., Khan S., Kim C., Lam B., Miranda M., Nguyen M., Palm C.J., Shinn P., Southwick A., Davis R.W., Ecker J.R., Federspiel N.A., Theologis A.
Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC013427 Genomic DNA. Translation: AAF98573.1.
BT005854 mRNA. Translation: AAO64789.1.
CP002684 Genomic DNA. Translation: AEE30693.1.
AK228207 mRNA. Translation: BAF00161.1.
IPIIPI00534028.
PIRC86391.
RefSeqNP_173968.1. NM_102408.2.
UniGeneAt.22714.

3D structure databases

ProteinModelPortalQ9FZD0.
SMRQ9FZD0. Positions 14-107.
ModBaseSearch...

Protein family/group databases

CAZyCBM43. Carbohydrate-Binding Module Family 43.

Proteomic databases

PRIDEQ9FZD0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G26450.1; AT1G26450.1; AT1G26450.
GeneID839186.
GenomeReviewsGene locus AT1G26450 in contig CT485782_GR.
KEGGath:AT1G26450.
NMPDRfig|3702.1.peg.2962.

Organism-specific databases

TAIRAt1g26450.

Phylogenomic databases

GeneTreeEPGT00050000003232.
HOGENOMHBG603981.
InParanoidQ9FZD0.
OMAKVIDFAC.
ProtClustDBCLSN2682653.

Gene expression databases

GenevestigatorQ9FZD0.

Family and domain databases

InterProIPR012946. X8.
[Graphical view]
PfamPF07983. X8. 1 hit.
[Graphical view]
SMARTSM00768. X8. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9FZD0_ARATH
AccessionPrimary (citable) accession number: Q9FZD0
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: January 25, 2012
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)