Q9FXB8 (Q9FXB8_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chitinase-like protein EMBL AEE33422.1

Submitted name:
Putative chitinase EMBL AAG09096.1

Gene names

Name:	F25P12.88 EMBL AAG09096.1
Ordered Locus Names:	At1g56680 TAIR At1g56680
ORF Names:	AT1G56680 EMBL AEE33422.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAG09096.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	280 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
PTM	Disulfide bond SAAS SAAS016283
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9FXB8 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 75E1E403CDE341EB	FASTA	280	31,183
	10 20 30 40 50 60 MATQNKIQKN SLIIFLFTLV VIAQTATSQN CLTIGCPGIN ECCSHTGYCG TNVEHCGFWC 70 80 90 100 110 120 LSGPCQLSKS SSSYRLNDGP RGKIESIVTP ALFHRLMRKV GSNCTGKGFY TREAFITAVK 130 140 150 160 170 180 SFEGYKGTVA KREIAAILAQ FSYESGNFCY KEEVTSETYC SSSKTYPCQS GKKYYGRGLL 190 200 210 220 230 240 QSIKWNEFYG EAGKYLGLPL LKDPDMVARS PEVAFKFAMW FWKTEVGPSL RLGFGATTMR 250 260 270 280 INGIECGGMS WNAEAMQNRI NQYLEICKWF GVNPGKDLYC

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed: 11130712] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[3]	Federspiel N.A., Palm C.J., Conway A.B., Conn L., Hansen N.F., Altafi H., Nguyen M., Lam B., Southwick A., Bei, Buehler E., Chin C., Chiou J., Choi E., Dunn P., Gonzalez A., Howng B., Kim C. , Koo T., Lee J.M., Lenz C., Li J., Liu A., Liu K., Liu S., Mukharsky N., Pham P., Sakano H., Schwartz J., Shinn P., Thaveri A., Toriumi M., Vaysberg M., Walker M., Yu G., Ecker J., Theologis A., Davis R.W. Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC009323 Genomic DNA. Translation: AAG09096.1. CP002684 Genomic DNA. Translation: AEE33422.1.
IPI	IPI00527232.
PIR	F96608.
RefSeq	NP_176061.1. NM_104545.2.
UniGene	At.42726.
3D structure databases
HSSP	HSSP built from PDB template 9WGA based on UniProtKB P02876.
ProteinModelPortal	Q9FXB8.
SMR	Q9FXB8. Positions 29-280.
ModBase	Search...
Protein family/group databases
CAZy	CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19.
Proteomic databases
PRIDE	Q9FXB8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT1G56680.1; AT1G56680.1; AT1G56680.
GeneID	842124.
KEGG	ath:AT1G56680.
NMPDR	fig|3702.1.peg.5215.
Organism-specific databases
TAIR	At1g56680.
Phylogenomic databases
GeneTree	EPGT00070000027946.
InParanoid	Q9FXB8.
PhylomeDB	Q9FXB8.
Gene expression databases
Genevestigator	Q9FXB8.
Family and domain databases
InterPro	IPR001002. Chitin-bd_1. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. IPR023346. Lysozyme-like_dom. [Graphical view]
Gene3D	G3DSA:3.30.60.10. Chitin_bd_1. 1 hit.
Pfam	PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
ProDom	PD000609. Chitin_bd_1. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9FXB8_ARATH

Accession

Primary (citable) accession number: Q9FXB8

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	January 25, 2012
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)