Skip Header

 
Contribute Send feedback
Read comments (1) or add your own

Unreviewed, UniProtKB/TrEMBL Q9FXA7 (Q9FXA7_ARATH)

Last modified April 14, 2009. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    F25P12.100 protein EMBL AAG09108.1
Submitted name:
    Putative uncharacterized protein At1g56550 EMBL AAO50644.1
    Putative uncharacterized protein At1g56550/F25P12_20 EMBL BAC42064.1
Gene names
Name: F25P12.100 EMBL AAG09108.1
Synonyms: At1g56550/F25P12_20 EMBL BAC42064.1
Ordered Locus Names: At1g56550 TAIR At1g56550
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length383 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentendoplasmic reticulum

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9FXA7-1 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: EC207CC6EE3E7DD2

FASTA38343,910
        10         20         30         40         50         60 
MAQQSQRPIS NRHISLLNRN GLILLLLLAL FVILGVFLPL TKSSLFMFPN TTSSSLSPSS 

        70         80         90        100        110        120 
SLSVSDWRDY SLAQAVKFVA KNETVIVCAV SYPFLPFLNN WLISISRQKH QEKVLVIAED 

       130        140        150        160        170        180 
YATLYKVNEK WPGHAVLIPP ALDPQSAHKF GSQGFFNLTS RRPQHLLNIL ELGYNVMYND 

       190        200        210        220        230        240 
VDMVWLQDPF DYLQGSYDAY FMDDMIAIKP LNHSHDLPPL SRSGVTYVCS CMIFLRSTDG 

       250        260        270        280        290        300 
GKLLMKTWVE EIQAQPWNNT QAKKPHDQPA FNRALHKTAN QVKVYLLPQS AFPSGGLYFR 

       310        320        330        340        350        360 
NETWVNETRG KHVIVHNNYI IGYDKKMKRF QDFSLWLVDD HALESPLGKL EIYQEQNTTT 

       370        380 
EGKNLTKIVR KQRKNRGKKH KLP 

« Hide

References

[1]Federspiel N.A., Palm C.J., Conway A.B., Conn L., Hansen N.F., Altafi H., Nguyen M., Lam B., Southwick A., Bei, Buehler E., Chin C., Chiou J., Choi E., Dunn P., Gonzalez A., Howng B., Kim C. expand/collapse author list , Koo T., Lee J.M., Lenz C., Li J., Liu A., Liu K., Liu S., Mukharsky N., Pham P., Sakano H., Schwartz J., Shinn P., Thaveri A., Toriumi M., Vaysberg M., Walker M., Yu G., Ecker J., Theologis A., Davis R.W.
Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y. expand/collapse author list , Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis thaliana full-length cDNA."
Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AC009323 Genomic DNA. Translation: AAG09108.1.
BT005111 mRNA. Translation: AAO50644.1.
AK117396 mRNA. Translation: BAC42064.1.
IPIIPI00528206.
PIRB96607.
RefSeqNP_176048.1.
UniGeneAt.42755

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT77. Glycosyltransferase Family 77.

Proteomic databases

PRIDEQ9FXA7.

Genome annotation databases

GeneID842108.
GenomeReviewsGene locus AT1G56550 in contig CT485782_GR.
KEGGath:AT1G56550.
NMPDRfig|3702.1.peg.5202.

Organism-specific databases

TAIRAt1g56550.

Family and domain databases

InterProIPR003388. Reticulon.
[Graphical view]
PANTHERPTHR10994. Reticulon. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9FXA7_ARATH
AccessionPrimary (citable) accession number: Q9FXA7
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: April 14, 2009
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information