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Reviewed, UniProtKB/Swiss-Prot Q9FVT2 (EF1G2_ARATH)

Last modified June 16, 2009. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Probable elongation factor 1-gamma 2
      Short name=EF-1-gamma 2
Alternative name(s):
    eEF-1B gamma 2
Gene names
Ordered Locus Names: At1g57720
ORF Names: T8L23.18
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length413 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Function

Probably plays a role in anchoring the complex to other cellular components By similarity.

Subunit structure

EF-1 is composed of four subunits: alpha, beta, delta, and gamma By similarity.

Sequence similarities

Contains 1 EF-1-gamma C-terminal domain.

Contains 1 GST C-terminal domain.

Contains 1 GST N-terminal domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 413413Probable elongation factor 1-gamma 2
PRO_0000208827

Regions

Domain1 – 8282GST N-terminal
Domain87 – 215129GST C-terminal
Domain253 – 413161EF-1-gamma C-terminal

Experimental info

Sequence conflict1781K → E in AAK59587. Ref.2

Sequences

Sequence LengthMass (Da)Tools
Q9FVT2-1 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 2C0993D65B8A4530

FASTA41346,400
        10         20         30         40         50         60 
MALVMHTYKG NKGANKALIA AEYAGVKIEE SADFQMGVTN KSPEFLKMNP IGKVPVLETP 

        70         80         90        100        110        120 
EGPIFESNAI ARYVSRKNGD NSLNGSSLIE YAHIEQWIDF SSLEIDANML KWFAPRMGYA 

       130        140        150        160        170        180 
PFSAPAEEAA ISALKRGLEA LNTHLASNTF LVGHSVTLAD IVTICNLNLG FATVMTKKFT 

       190        200        210        220        230        240 
SAFPHVERYF WTMVNQPEFK KVLGDAKQTE AVPPVPTKKA PQPAKPKEEP KKAAPVAEAP 

       250        260        270        280        290        300 
KPAEEEEAPK PKAKNPLDLL PPSPMVLDDW KRLYSNTKSN FREVAIKGFW DMYDPEGYSL 

       310        320        330        340        350        360 
WFCDYKYNDE NMVSFVTLNK VGGFLQRMDL ARKYSFGKML ICGSEGPFKV KGLWLFRGPE 

       370        380        390        400        410 
IPKFIMDEVY DMELYEWTKV DISDEAQKER VSQMIEDAEP FEGEALLDAK CFK 

« Hide

References

[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed: 11130712] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed: 14593172] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[3]"Full-length cDNA from Arabidopsis thaliana."
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Cross-references

Sequence databases

AC079733 Genomic DNA. Translation: AAG50755.1.
BT000973 mRNA. Translation: AAN41373.1.
AY113043 mRNA. Translation: AAM47351.1.
AY064630 mRNA. Translation: AAL47343.1.
AF428347 mRNA. Translation: AAL16277.1.
AF424630 mRNA. Translation: AAL11623.1.
AF370502 mRNA. Translation: AAK43879.1.
AY035082 mRNA. Translation: AAK59587.1.
AY085256 mRNA. Translation: AAM62488.1.
IPIIPI00543798.
PIRE96611.
RefSeqNP_001031202.1.
NP_176084.1.
UniGeneAt.23720
At.67042

3D structure databases

HSSPHSSP built from PDB template 1PBU based on UniProtKB P26641.
ModBaseSearch...

Proteomic databases

PRIDEQ9FVT2.

Genome annotation databases

GeneID842147.
GenomeReviewsGene locus AT1G57720 in contig CT485782_GR.
KEGGath:AT1G57720.
NMPDRfig|3702.1.peg.5241.

Organism-specific databases

TAIRAt1g57720.

Phylogenomic databases

OMAQ9FVT2. DISVACN.

Gene expression databases

GermOnlineAT1G57720. Arabidopsis thaliana.

Family and domain databases

InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR017933. Glutathione_S_Trfase/Cl_chnl_C.
IPR004046. GST_C.
IPR012335. Thioredoxin_fold.
IPR001662. Transl_elong_EF1_G_con.
[Graphical view]
Gene3DG3DSA:1.20.1050.10. GST_C_like. 1 hit.
G3DSA:3.40.30.10. Thioredoxin_fold. 1 hit.
G3DSA:3.30.70.1010. Transl_elong_EF1_G_con. 1 hit.
PfamPF00647. EF1G. 1 hit.
PF00043. GST_C. 1 hit.
PF02798. GST_N. 1 hit.
[Graphical view]
ProDomPD006217. EF1_G. 1 hit.
[Graphical view] [Entries sharing at least one domain]
PROSITEPS50040. EF1G_C. 1 hit.
PS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameEF1G2_ARATH
AccessionPrimary (citable) accession number: Q9FVT2
Secondary accession number(s): Q94C85
Entry history
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: March 1, 2001
Last modified: June 16, 2009
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents