Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q9FUD3 (BZIP9_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Basic leucine zipper 9

Short name=AtbZIP9
Short name=bZIP protein 9
Alternative name(s):
Basic leucine zipper OPAQUE 2 homolog 2
Short name=Basic leucine zipper O2 homolog 2
Gene names
Name:BZIP9
Synonyms:BZO2H2
Ordered Locus Names:At5g24800
ORF Names:F6A4.10
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length277 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Transcription factor By similarity.

Subunit structure

Homodimer. Interacts with BZIP1, BZIP2, BZIP10, BZIP11, BZIP25, BZIP44, BZIP53 and BZIP63. Ref.6 Ref.7 Ref.10

Subcellular location

Nucleus By similarity.

Tissue specificity

Expressed in roots, shoots, stems, young leaves, and flowers, mostly in vascular tissues (e.g. phloem). Ref.5 Ref.8

Developmental stage

Present in silique vasculature and funiculi. In the anthers, restricted to the connective tissue at pre- and post-dehiscence stages and detected in the vascular tissue of the stamen filament. Ref.8

Induction

Repressed by glucose. Ref.8

Post-translational modification

Phosphorylated. Ref.9

Sequence similarities

Belongs to the bZIP family.

Contains 1 bZIP (basic-leucine zipper) domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 277277Basic leucine zipper 9
PRO_0000416559

Regions

Domain120 – 18364bZIP
Region122 – 14120Basic motif By similarity
Region148 – 16215Leucine-zipper By similarity
Motif124 – 1318Nuclear localization signal By similarity

Sequences

Sequence LengthMass (Da)Tools
Q9FUD3 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 003617E73298544F

FASTA27730,409
        10         20         30         40         50         60 
MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF 

        70         80         90        100        110        120 
RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS DDEDAETEAG QSEMTNDPND 

       130        140        150        160        170        180 
LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN 

       190        200        210        220        230        240 
RVLKSDVETL RVKVKLAEDL VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV 

       250        260        270 
HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP 

« Hide

References

« Hide 'large scale' references
[1]"Evolutionary pattern of angiosperm bZIP factors homologous to the maize Opaque2 regulatory protein."
Vincentz M., Bandeira-Kobarg C., Gauer L., Schloegl P., Leite A.
J. Mol. Evol. 56:105-116(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY.
Strain: cv. Columbia.
[2]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[4]"bZIP transcription factors in Arabidopsis."
Jakoby M., Weisshaar B., Droege-Laser W., Vicente-Carbajosa J., Tiedemann J., Kroj T., Parcy F.
Trends Plant Sci. 7:106-111(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
[5]"Synergistic activation of seed storage protein gene expression in Arabidopsis by ABI3 and two bZIPs related to OPAQUE2."
Lara P., Onate-Sanchez L., Abraham Z., Ferrandiz C., Diaz I., Carbonero P., Vicente-Carbajosa J.
J. Biol. Chem. 278:21003-21011(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: TISSUE SPECIFICITY, GENE FAMILY.
Strain: cv. Columbia.
[6]"Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks."
Deppmann C.D., Alvania R.S., Taparowsky E.J.
Mol. Biol. Evol. 23:1480-1492(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBUNIT.
[7]"Two-hybrid protein-protein interaction analysis in Arabidopsis protoplasts: establishment of a heterodimerization map of group C and group S bZIP transcription factors."
Ehlert A., Weltmeier F., Wang X., Mayer C.S., Smeekens S., Vicente-Carbajosa J., Droege-Laser W.
Plant J. 46:890-900(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: INTERACTION WITH BZIP1; BZIP2; BZIP10; BZIP11; BZIP25; BZIP44; BZIP53 AND BZIP63.
[8]"Expression patterns within the Arabidopsis C/S1 bZIP transcription factor network: availability of heterodimerization partners controls gene expression during stress response and development."
Weltmeier F., Rahmani F., Ehlert A., Dietrich K., Schuetze K., Wang X., Chaban C., Hanson J., Teige M., Harter K., Vicente-Carbajosa J., Smeekens S., Droege-Laser W.
Plant Mol. Biol. 69:107-119(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, INDUCTION BY GLUCOSE.
Strain: cv. Columbia.
[9]"The role of phosphorylatable serine residues in the DNA-binding domain of Arabidopsis bZIP transcription factors."
Kirchler T., Briesemeister S., Singer M., Schuetze K., Keinath M., Kohlbacher O., Vicente-Carbajosa J., Teige M., Harter K., Chaban C.
Eur. J. Cell Biol. 89:175-183(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION.
[10]"The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding."
Kang S.G., Price J., Lin P.-C., Hong J.C., Jang J.-C.
Mol. Plant 3:361-373(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBUNIT.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF310223 mRNA. Translation: AAG25728.1.
AF069716 Genomic DNA. No translation available.
CP002688 Genomic DNA. Translation: AED93363.1.
IPIIPI00544107.
RefSeqNP_568457.1. NM_122389.4.
UniGeneAt.25540.
At.49059.

3D structure databases

HSSPHSSP built from PDB template 1YSA based on UniProtKB P03069.
ProteinModelPortalQ9FUD3.
SMRQ9FUD3. Positions 128-167.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9FUD3. 13 interactions.
STRING3702.AT5G24800.1-P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G24800.1; AT5G24800.1; AT5G24800.
GeneID832549.
KEGGath:AT5G24800.

Organism-specific databases

TAIRAt5g24800.

Phylogenomic databases

HOGENOMHOG000240492.
InParanoidQ9FUD3.
OMAQSSICEN.
PhylomeDBQ9FUD3.
ProtClustDBCLSN2719534.

Gene expression databases

GenevestigatorQ9FUD3.

Family and domain databases

InterProIPR020983. Basic_leucine-zipper_C.
IPR004827. bZIP.
[Graphical view]
PfamPF00170. bZIP_1. 1 hit.
PF12498. bZIP_C. 1 hit.
[Graphical view]
SMARTSM00338. BRLZ. 1 hit.
[Graphical view]
PROSITEPS50217. BZIP. 1 hit.
PS00036. BZIP_BASIC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBZIP9_ARATH
AccessionPrimary (citable) accession number: Q9FUD3
Entry history
Integrated into UniProtKB/Swiss-Prot: April 18, 2012
Last sequence update: March 1, 2001
Last modified: May 1, 2013
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families