Basic leucine zipper 9 - Arabidopsis thaliana (Mouse-ear cress)

Contribute

Send feedback

Read comments (?) or add your own

Q9FUD3 (BZIP9_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 82. History...

Clusters with 100%, 90%, 50% identity |

Documents (2) |

Third-party data

text xml rdf/xml gff fasta

Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
Basic leucine zipper 9
Short name=AtbZIP9
Short name=bZIP protein 9

Alternative name(s):
Basic leucine zipper OPAQUE 2 homolog 2
Short name=Basic leucine zipper O2 homolog 2

Gene names

Name:	BZIP9
Synonyms:	BZO2H2
Ordered Locus Names:	At5g24800
ORF Names:	F6A4.10

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	277 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	Transcription factor By similarity.
Subunit structure	Homodimer. Interacts with BZIP1, BZIP2, BZIP10, BZIP11, BZIP25, BZIP44, BZIP53 and BZIP63. Ref.6 Ref.7 Ref.10
Subcellular location	Nucleus By similarity.
Tissue specificity	Expressed in roots, shoots, stems, young leaves, and flowers, mostly in vascular tissues (e.g. phloem). Ref.5 Ref.8
Developmental stage	Present in silique vasculature and funiculi. In the anthers, restricted to the connective tissue at pre- and post-dehiscence stages and detected in the vascular tissue of the stamen filament. Ref.8
Induction	Repressed by glucose. Ref.8
Post-translational modification	Phosphorylated. Ref.9
Sequence similarities	Belongs to the bZIP family. Contains 1 bZIP (basic-leucine zipper) domain.

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Cellular component	Nucleus
Ligand	DNA-binding
PTM	Phosphoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	cellular response to glucose stimulus Inferred from expression pattern Ref.8. Source: UniProtKB transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	nucleus Inferred from direct assay PubMed 16581911. Source: TAIR
Molecular_function	sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from sequence or structural similarity PubMed 11118137 Ref.4. Source: TAIR
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct
BZIP1	Q9FGX2	3	EBI-942633,EBI-942623
bZIP2	Q9SI15	3	EBI-942633,EBI-942735
F1B16.8	Q9FWS7	3	EBI-942633,EBI-942804
GBF6	P94060	3	EBI-942633,EBI-942769
T12C14_120	Q9LZP8	5	EBI-942633,EBI-942845

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 277

277

Basic leucine zipper 9

PRO_0000416559

Regions

Domain

120 – 183

bZIP

Region

122 – 141

Basic motif By similarity

Region

148 – 162

Leucine-zipper By similarity

Motif

124 – 131

Nuclear localization signal By similarity

Sequences

Sequence

Length

Mass (Da)

Tools

Q9FUD3 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 003617E73298544F
Show »

FASTA

277

30,409

        10         20         30         40         50         60 
MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF 

        70         80         90        100        110        120 
RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS DDEDAETEAG QSEMTNDPND 

       130        140        150        160        170        180 
LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN 

       190        200        210        220        230        240 
RVLKSDVETL RVKVKLAEDL VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV 

       250        260        270 
HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP

« Hide

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Evolutionary pattern of angiosperm bZIP factors homologous to the maize Opaque2 regulatory protein." Vincentz M., Bandeira-Kobarg C., Gauer L., Schloegl P., Leite A. J. Mol. Evol. 56:105-116(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY. Strain: cv. Columbia.
[2]	"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana." Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. Fransz P.F. Nature 408:823-826(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[3]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[4]	"bZIP transcription factors in Arabidopsis." Jakoby M., Weisshaar B., Droege-Laser W., Vicente-Carbajosa J., Tiedemann J., Kroj T., Parcy F. Trends Plant Sci. 7:106-111(2002) [PubMed] [Europe PMC] [Abstract] Cited for: GENE FAMILY, NOMENCLATURE.
[5]	"Synergistic activation of seed storage protein gene expression in Arabidopsis by ABI3 and two bZIPs related to OPAQUE2." Lara P., Onate-Sanchez L., Abraham Z., Ferrandiz C., Diaz I., Carbonero P., Vicente-Carbajosa J. J. Biol. Chem. 278:21003-21011(2003) [PubMed] [Europe PMC] [Abstract] Cited for: TISSUE SPECIFICITY, GENE FAMILY. Strain: cv. Columbia.
[6]	"Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks." Deppmann C.D., Alvania R.S., Taparowsky E.J. Mol. Biol. Evol. 23:1480-1492(2006) [PubMed] [Europe PMC] [Abstract] Cited for: SUBUNIT.
[7]	"Two-hybrid protein-protein interaction analysis in Arabidopsis protoplasts: establishment of a heterodimerization map of group C and group S bZIP transcription factors." Ehlert A., Weltmeier F., Wang X., Mayer C.S., Smeekens S., Vicente-Carbajosa J., Droege-Laser W. Plant J. 46:890-900(2006) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH BZIP1; BZIP2; BZIP10; BZIP11; BZIP25; BZIP44; BZIP53 AND BZIP63.
[8]	"Expression patterns within the Arabidopsis C/S1 bZIP transcription factor network: availability of heterodimerization partners controls gene expression during stress response and development." Weltmeier F., Rahmani F., Ehlert A., Dietrich K., Schuetze K., Wang X., Chaban C., Hanson J., Teige M., Harter K., Vicente-Carbajosa J., Smeekens S., Droege-Laser W. Plant Mol. Biol. 69:107-119(2009) [PubMed] [Europe PMC] [Abstract] Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, INDUCTION BY GLUCOSE. Strain: cv. Columbia.
[9]	"The role of phosphorylatable serine residues in the DNA-binding domain of Arabidopsis bZIP transcription factors." Kirchler T., Briesemeister S., Singer M., Schuetze K., Keinath M., Kohlbacher O., Vicente-Carbajosa J., Teige M., Harter K., Chaban C. Eur. J. Cell Biol. 89:175-183(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION.
[10]	"The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding." Kang S.G., Price J., Lin P.-C., Hong J.C., Jang J.-C. Mol. Plant 3:361-373(2010) [PubMed] [Europe PMC] [Abstract] Cited for: SUBUNIT.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF310223 mRNA. Translation: AAG25728.1. AF069716 Genomic DNA. No translation available. CP002688 Genomic DNA. Translation: AED93363.1.
IPI	IPI00544107.
RefSeq	NP_568457.1. NM_122389.4.
UniGene	At.25540. At.49059.
3D structure databases
HSSP	HSSP built from PDB template 1YSA based on UniProtKB P03069.
ProteinModelPortal	Q9FUD3.
SMR	Q9FUD3. Positions 128-167.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9FUD3. 13 interactions.
STRING	3702.AT5G24800.1-P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G24800.1; AT5G24800.1; AT5G24800.
GeneID	832549.
KEGG	ath:AT5G24800.
Organism-specific databases
TAIR	At5g24800.
Phylogenomic databases
HOGENOM	HOG000240492.
InParanoid	Q9FUD3.
OMA	QSSICEN.
PhylomeDB	Q9FUD3.
ProtClustDB	CLSN2719534.
Gene expression databases
Genevestigator	Q9FUD3.
Family and domain databases
InterPro	IPR020983. Basic_leucine-zipper_C. IPR004827. bZIP. [Graphical view]
Pfam	PF00170. bZIP_1. 1 hit. PF12498. bZIP_C. 1 hit. [Graphical view]
SMART	SM00338. BRLZ. 1 hit. [Graphical view]
PROSITE	PS50217. BZIP. 1 hit. PS00036. BZIP_BASIC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

BZIP9_ARATH

Accession

Primary (citable) accession number: Q9FUD3

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 18, 2012
Last sequence update:	March 1, 2001
Last modified:	May 1, 2013
This is version 82 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Binary interactions

With

Entry

#Exp.

IntAct

Notes

Sequence annotation (Features)

Molecule processing

Regions

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

Entry information

Relevant documents