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Protein

Profilin-A

Gene

Os10g0323600

more
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. By binding to PIP2, it inhibits the formation of IP3 and DG (By similarity). May serve as a modulator in pollen germination and pollen tube growth.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Actin-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Profilin-A
Gene namesi
Ordered Locus Names:Os10g0323600, LOC_Os10g17660
ORF Names:OSJNBa0065C16.11
AND
Ordered Locus Names:Os10g0323900, LOC_Os10g17680
ORF Names:OSJNBa0065C16.14
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 10

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Cytoskeleton

Pathology & Biotechi

Protein family/group databases

Allergomei3395. Ory s 12.0101.
996. Ory s 12.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 131130Profilin-APRO_0000199659Add
BLAST

Proteomic databases

PaxDbiQ9FUD1.

Expressioni

Gene expression databases

ExpressionAtlasiQ9FUD1. baseline and differential.
GenevisibleiQ9FUD1. OS.

Interactioni

Subunit structurei

Occurs in many kinds of cells as a complex with monomeric actin in a 1:1 ratio.

GO - Molecular functioni

Protein-protein interaction databases

STRINGi39947.LOC_Os10g17680.1.

Structurei

3D structure databases

ProteinModelPortaliQ9FUD1.
SMRiQ9FUD1. Positions 2-131.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the profilin family.Curated

Phylogenomic databases

eggNOGiKOG1755. Eukaryota.
ENOG41126PD. LUCA.
HOGENOMiHOG000171591.
InParanoidiQ9FUD1.
KOiK05759.
OMAiIYEEPVQ.

Family and domain databases

InterProiIPR005455. PFN.
IPR027310. Profilin_CS.
[Graphical view]
PANTHERiPTHR11604. PTHR11604. 1 hit.
PfamiPF00235. Profilin. 1 hit.
[Graphical view]
PRINTSiPR00392. PROFILIN.
PR01640. PROFILINPLNT.
SMARTiSM00392. PROF. 1 hit.
[Graphical view]
SUPFAMiSSF55770. SSF55770. 1 hit.
PROSITEiPS00414. PROFILIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9FUD1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSWQTYVDEH LMCEIEGHHL TSAAIVGHDG TVWAQSAAFP QFKPEEMTNI
60 70 80 90 100
MKDFDEPGFL APTGLFLGPT KYMVIQGEPG AVIRGKKGSG GITVKKTGQA
110 120 130
LVVGIYDEPM TPGQCNMVVE RLGDYLVEQG L
Length:131
Mass (Da):14,243
Last modified:March 1, 2001 - v1
Checksum:iCEB39EB02CA873D4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF310253 mRNA. Translation: AAG32056.1.
AC074354 Genomic DNA. Translation: AAK92577.1.
AC074354 Genomic DNA. Translation: AAK92580.1.
DP000086 Genomic DNA. Translation: AAP52954.1.
DP000086 Genomic DNA. Translation: AAP52957.1.
AP008216 Genomic DNA. Translation: BAF26262.1.
AP008216 Genomic DNA. Translation: BAF26263.1.
AP014966 Genomic DNA. Translation: BAT10321.1.
AP014966 Genomic DNA. Translation: BAT10322.1.
CM000147 Genomic DNA. Translation: EAZ15650.1.
CM000147 Genomic DNA. Translation: EAZ15648.1.
AK100089 mRNA. Translation: BAG94438.1.
RefSeqiXP_015613779.1. XM_015758293.1.
XP_015613794.1. XM_015758308.1.
UniGeneiOs.12777.
Os.57684.

Genome annotation databases

EnsemblPlantsiOS10T0323600-01; OS10T0323600-01; OS10G0323600.
OS10T0323900-01; OS10T0323900-01; OS10G0323900.
GeneIDi4348316.
4348317.
GrameneiOS10T0323600-01; OS10T0323600-01; OS10G0323600.
OS10T0323900-01; OS10T0323900-01; OS10G0323900.
KEGGiosa:4348316.
osa:4348317.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF310253 mRNA. Translation: AAG32056.1.
AC074354 Genomic DNA. Translation: AAK92577.1.
AC074354 Genomic DNA. Translation: AAK92580.1.
DP000086 Genomic DNA. Translation: AAP52954.1.
DP000086 Genomic DNA. Translation: AAP52957.1.
AP008216 Genomic DNA. Translation: BAF26262.1.
AP008216 Genomic DNA. Translation: BAF26263.1.
AP014966 Genomic DNA. Translation: BAT10321.1.
AP014966 Genomic DNA. Translation: BAT10322.1.
CM000147 Genomic DNA. Translation: EAZ15650.1.
CM000147 Genomic DNA. Translation: EAZ15648.1.
AK100089 mRNA. Translation: BAG94438.1.
RefSeqiXP_015613779.1. XM_015758293.1.
XP_015613794.1. XM_015758308.1.
UniGeneiOs.12777.
Os.57684.

3D structure databases

ProteinModelPortaliQ9FUD1.
SMRiQ9FUD1. Positions 2-131.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os10g17680.1.

Protein family/group databases

Allergomei3395. Ory s 12.0101.
996. Ory s 12.

Proteomic databases

PaxDbiQ9FUD1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS10T0323600-01; OS10T0323600-01; OS10G0323600.
OS10T0323900-01; OS10T0323900-01; OS10G0323900.
GeneIDi4348316.
4348317.
GrameneiOS10T0323600-01; OS10T0323600-01; OS10G0323600.
OS10T0323900-01; OS10T0323900-01; OS10G0323900.
KEGGiosa:4348316.
osa:4348317.

Phylogenomic databases

eggNOGiKOG1755. Eukaryota.
ENOG41126PD. LUCA.
HOGENOMiHOG000171591.
InParanoidiQ9FUD1.
KOiK05759.
OMAiIYEEPVQ.

Gene expression databases

ExpressionAtlasiQ9FUD1. baseline and differential.
GenevisibleiQ9FUD1. OS.

Family and domain databases

InterProiIPR005455. PFN.
IPR027310. Profilin_CS.
[Graphical view]
PANTHERiPTHR11604. PTHR11604. 1 hit.
PfamiPF00235. Profilin. 1 hit.
[Graphical view]
PRINTSiPR00392. PROFILIN.
PR01640. PROFILINPLNT.
SMARTiSM00392. PROF. 1 hit.
[Graphical view]
SUPFAMiSSF55770. SSF55770. 1 hit.
PROSITEiPS00414. PROFILIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning and characterization of rice pollen profilin gene."
    Ye Q., Xu Y., Yan F., Tang L., Chen F.
    Submitted (OCT-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Pollen.
  2. "In-depth view of structure, activity, and evolution of rice chromosome 10."
    Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S., Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D., Oates R., Palmer M., Pries G., Gibson J., Anderson H.
    , Paradkar M., Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F., Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M., Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R., Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F., Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D., Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R., Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K., Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S., Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S., Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R., Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M., Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R., Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E., Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.
    Science 300:1566-1569(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  5. Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  6. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  7. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (OS10G0323900).
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiPROFA_ORYSJ
AccessioniPrimary (citable) accession number: Q9FUD1
Secondary accession number(s): A3C3I5
, Q0IYF2, Q7G3W8, Q7G7Y1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 20, 2001
Last sequence update: March 1, 2001
Last modified: June 8, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.