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Q9FT97 (Q9FT97_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha-galactosidase 1 EMBL AED91292.1
Submitted name:
Alpha-galactosidase-like protein EMBL CAC08338.1
Gene names
Name:F8L15_110 EMBL CAC08338.1
Synonyms:AGAL1 EMBL AED91292.1
Ordered Locus Names:At5g08380 TAIR At5g08380
ORF Names:AT5G08380 EMBL AED91292.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL CAC08338.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length410 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q9FT97 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: F68C52E35FC11F0A

FASTA41045,709
        10         20         30         40         50         60 
MSRRAMVIKM PILMILISSM VMTMVESSRS VNNGHDDSEI LRRHLLTNGL GVTPPMGWNS 

        70         80         90        100        110        120 
WNHFSCNIDE KMIKETADAL VTTGLSKLGY NYVNIDDCWA EISRDSKGSL VPKKSTFPSG 

       130        140        150        160        170        180 
IKAVADYVHS KGLKLGIYSD AGYFTCSKTM PGSLGYEEHD AKTFAEWGID YLKYDNCNSD 

       190        200        210        220        230        240 
GSKPTVRYPV MTRALMKSGR PIFHSLCEWG DMHPALWGSP VGNSWRTTND IKDTWLSMIS 

       250        260        270        280        290        300 
IADMNEVYAE HARPGGWNDP DMLEVGNGGM TKDEYIVHFS IWAISKAPLL LGCDIRNMTK 

       310        320        330        340        350        360 
ETMEIVANKE VIAINQDPHG VQAKKVRMEG DLEVWAGPLS GYRVALLLLN RGPSRTSITA 

       370        380        390        400        410 
LWEDIEIPAN SIVEARDLWE HQTLKQKFVG NLTATVDSHA CKLYVLKPVA

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed: 11130714] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]EU Arabidopsis sequencing project
Submitted (SEP-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]Bevan M., Terryn N., Ardiles W., Buysshaert C., Dasseville R., De Clerck R., De Keyser A., Neyt P., Rouze P., Van Den Daele H., Villaroel R., Gielen J., Van Montagu M., Bancroft I., Mewes H.W., Rudd S., Lemcke K., Mayer K.F.X.
Submitted (SEP-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002688 Genomic DNA. Translation: AED91292.1.
AL392174 Genomic DNA. Translation: CAC08338.1.
IPIIPI00526179.
RefSeqNP_196455.1. NM_120922.4.
UniGeneAt.10139.

3D structure databases

HSSPHSSP built from PDB template 1UAS based on UniProtKB Q9FXT4.
ProteinModelPortalQ9FT97.
SMRQ9FT97. Positions 48-408.
ModBaseSearch...

Protein family/group databases

CAZyGH27. Glycoside Hydrolase Family 27.

Proteomic databases

PRIDEQ9FT97.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G08380.1; AT5G08380.1; AT5G08380.
GeneID830736.
KEGGath:AT5G08380.
NMPDRfig|3702.1.peg.22985.

Organism-specific databases

TAIRAt5g08380.

Phylogenomic databases

GeneTreeEPGT00050000009910.
InParanoidQ9FT97.
OMAMTRALMK.
PhylomeDBQ9FT97.
ProtClustDBPLN02692.

Gene expression databases

GenevestigatorQ9FT97.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR013780. Glyco_hydro_13_b.
IPR002241. Glyco_hydro_27.
IPR000111. Glyco_hydro_GHD.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
KOK07407.
PfamPF02065. Melibiase. 1 hit.
[Graphical view]
PRINTSPR00740. GLHYDRLASE27.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00512. ALPHA_GALACTOSIDASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9FT97_ARATH
AccessionPrimary (citable) accession number: Q9FT97
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: January 25, 2012
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info